mRNA_P-littoralis_Contig9.150.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: A0A6H5L9A2_9PHAE (Fe-ADH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9A2_9PHAE) HSP 1 Score: 598 bits (1543), Expect = 3.880e-208 Identity = 320/433 (73.90%), Postives = 358/433 (82.68%), Query Frame = 1
Query: 352 MRRRLASTVRQLPCRAGPDLELVVEADCSWTKIGAQVGRHGRTCLAIVDDGPSGQA-DRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAGRLSVITPAPPTQLMARAAGSLLARHSYPSVCAMVFPHVVGDMLNQASSFSGDAEVSEAIERALSLSASLLLGDGRDGQALMSWLHAQEHDWLNFSSSLSSVDSTITTKDVATNAEMLLAIEEDRDAADRLWSWSGVQDVAELVVG 1647
MR RL S R+L P +L+VEADCSWTK+ AQV RHGRTCLAI DD GQA RCLFELRK GINCA FT RG YPTADGIDEAREMA+RIGA IV +G GGT+DTAKA ARLH+SSGGCK FL SPGGVL+GE G+S+PR+PAG+ALPLV++PTSAG+GAAAN RCLVWHPDDEVLVPLAE G+S++V+LVDP CTSL QT AMALTALS CVDALLARELAL +GT P Q+ D LL LG RGI AVAEGLP AL DGKN +ARELLT+GSVCAG+L+V TPAPPTQL+ARA GSLL RHSYPSVCAMVFPHVVGDML+QA+SFSGDA+ +EAIERALSLSASL LGDG DGQALMSWL AQE + L+F S LSSVDSTIT KDV TN +MLLAIEED AADR+WS G D+A+ +VG
Sbjct: 1 MRCRLVSIRRKLSSCPSPSPKLIVEADCSWTKVVAQVSRHGRTCLAIADDNTPGQAVGRCLFELRKAGINCAMFTGRGAYPTADGIDEAREMARRIGATCIVSVGRGGTIDTAKAAARLHSSSGGCKQFLTSPGGVLMGEDGHSKPRTPAGNALPLVAIPTSAGAGAAANGRCLVWHPDDEVLVPLAEE---GESLTVALVDPILCTSLSKSQTAAMALTALSACVDALLARELALASGT-PLQNGDALLDLGRRGIDAVAEGLPVALADGKNKLARELLTIGSVCAGQLAVATPAPPTQLVARATGSLLGRHSYPSVCAMVFPHVVGDMLSQANSFSGDAQAAEAIERALSLSASLFLGDGNDGQALMSWLEAQERELLDFGS-LSSVDSTITAKDVVTNIDMLLAIEEDTAAADRVWSAGGTSDMADHIVG 428
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: A0A836CAW8_9STRA (Iron-containing alcohol dehydrogenase-domain containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW8_9STRA) HSP 1 Score: 192 bits (489), Expect = 6.250e-51 Identity = 140/359 (39.00%), Postives = 189/359 (52.65%), Query Frame = 1
Query: 412 ELVVEADCSWTKIGAQVGRHGRTCLAIVDDGPSGQAD--RCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSP-AGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQ--LGTRGIGAVAEGLPAALEDGK--NVMAREL-LTMGSVCAGRLSVITPAPPTQLMARAAGSLLARHSYPSVCAMVFPHVVGD-----------MLNQASSFSGDAEVSEAIERALSLSASLLLGD 1431
++ +E DCSW IG + G L + QA R LFE+RK G++C T+T + +YPTA GIDE MAKRIGA S+VG+G GG VDTAKA A L + G C+HFL+SP +LG G S+ ++ + A+P V+VP+ G AA + V HP+D +LVP+ V+LVDP SL ++MA+ AL+ CVDALL A A QD++ + L GI A+A GLPAA N A+ L L S+ AG T APP Q +A AAGSLL Y + A +FPH + + +L Q ++ G V+ + LLLGD
Sbjct: 50 DVTLEDDCSWKAIGDCIAGLGGKGLVVHGGSNRAQASAQRILFEIRKAGVDCTTYTVKDLYPTAPGIDEGLSMAKRIGAMSVVGLGRGGVVDTAKAIAALVGTKGKCQHFLESPSDGVLGSSGTSQSKAAYSAAAIPCVAVPSGIGVSAATSPSVHVLHPEDGLLVPMKRHHS--LVPRVALVDPLLTASLRETTALSMAVAALAACVDALLV------ATRAADQDAEASRRQALALEGIRAIATGLPAAAAAATALNDSAQRLELVRASIAAGTAVGATAAPPMQTIAMAAGSLLPLTPYSELVASLFPHFLSEFTEAEDEAADAVLKQVAAVLGSETVAGWVRERTGHFQPLLLGD 400
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: W7TPR3_9STRA (Iron-containing alcohol dehydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPR3_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.750e-23 Identity = 115/386 (29.79%), Postives = 176/386 (45.60%), Query Frame = 1
Query: 331 CVAGRQIMRRRLASTVRQLPCRAGPDLELVVEADCSWTKIGAQVGRHGRTC--LAIVDDGPSGQAD-----RCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGG-CKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAA-NRRCLVWHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAGRLSVITPAPPTQLMARAAGSLLARHSYPSVCAMVFPHVVGDMLN--QASSFSGDAEVSEAIERALSLSASLLLGDGRDGQALM 1455
C R ++R +S+ LP P + + + + +H R +V P+ +A+ R L LR +GI C TF+ YPT +DE +MAKR+GA SI+G+GGGG +D AK A L + G + +L+ V E S+ R LP+V+VPT+A +G +CL + +E LVPL + +++VDPT +L + +MAL A S C DALL + A +D++L G + GL A + K R L GSV AGRL + APP Q +AR L +Y + A++ + + + Q G+A + R + + S G G +G L+
Sbjct: 16 CQLHRPQVKRSSSSSQAVLPLNNSPQ-HATTQIELNENAVDEVGVKHRRLIGPRTVVVSTPTDRAENPHVQRVLARLRGVGIECGTFSMLERYPTTQALDEGAQMAKRMGAHSIIGVGGGGALDLAKGMAVLACTGEGRARDYLR----VFHKEKELSDQR------LPVVTVPTTASAGGGGIGPQCLALYEAEEALVPLHARD---LAPDLAIVDPTLTVTLPLQAERSMALGAWSVCFDALLCGSVR--GVLANHAMADLILG----GASELGRGLGMAAGNDKGETKRRHLAQGSVAAGRLLRLVKAPPIQSLARCLAPLFPLATYSQLTAVLLRSYLAVLADRRQQGELGGEAWNEALLLRMGAATCSARDGPGANGGGLL 381
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: UPI001FE441BB (iron-containing alcohol dehydrogenase n=1 Tax=Kibdelosporangium persicum TaxID=2698649 RepID=UPI001FE441BB) HSP 1 Score: 84.7 bits (208), Expect = 5.350e-14 Identity = 77/255 (30.20%), Postives = 116/255 (45.49%), Query Frame = 1
Query: 454 AQVGRHGRTCLAIVDDG--PSGQADRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAG 1212
A+VG GRT + D G +G DR L K G+ F G P D ID A + +R G A+++ +GGG ++D AK A L ++G + F +EP +P LPLV+VPT+AG+GA N ++ +D G +S++DP L T A AL +++L +R G+ P + T+ +G V LP A+ DGK++ AR + + S AG
Sbjct: 6 AEVG--GRTAFVVTDTGMRATGIIDRVSAILDKAGVRHEIFDQVGPNPGTDDIDAAAALVRRFGDAAVIPVGGGSSLDAAKGIALLAVNAGVARDFDY-----------RNEPDNPG---LPLVAVPTTAGTGAETNGFGVI---EDRAAHRKVYIGHGSVQPRISILDPELTVGLPPRATAATGFDALVHGIESLASR------GSNP-----ISAAYATQAVGMVGHWLPQAVRDGKDIEARAQMILASHLAG 230
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: A0A0B1TWH1_9DELT (Alcohol dehydrogenase n=1 Tax=Desulfovibrio sp. TomC TaxID=1562888 RepID=A0A0B1TWH1_9DELT) HSP 1 Score: 81.6 bits (200), Expect = 7.670e-13 Identity = 97/338 (28.70%), Postives = 144/338 (42.60%), Query Frame = 1
Query: 460 VGRHGRTCLAIVDDGPSGQADRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAGRLSVITPAPPTQLMARAAGSLL-ARHSYPSVCAMVFPHVVGDMLNQASSFSGDAEVSEAIERALSLSASLLLGDGRDGQALMSWLHA 1470
V HGRT L + P+ L LR+ G F G P + +A+ G ++G+GGGG +DTAKA A L ++ +L+ ++G G R LPL++VPT+AG+GA A ++ P + V V L SP V+L+DP S+ T A L AL+ ++A ++ + A P +D L + G+G + L AA +DG N+ ARE + + S+ G A G L A H VCA + P V + S + + A A ++ DG A WLHA
Sbjct: 25 VAAHGRTPLVVTGANPTRHGG-VLDALRQAGCTVTVFPVAG-EPRVETAMAGARLARENGCDVVLGLGGGGALDTAKAVAALATNTEDIFAYLE-----VVGAGRPLSQRP-----LPLLAVPTTAGTGAEATANAVLTVPGERVKVSL-RSPM--MLPDVALIDPLLTVSMPPAVTAATGLDALTQLLEAFVSNK-------ANPM-TDALCR---EGLGRASRALLAAYDDGTNLEAREDMALASLLGGMALANAKLGAVHGFAAPLGGLFNAPHG--QVCASLLPFVTAANIRALRSRAPASPALCAYAAAAAIVTGAPHASPEDGLA---WLHA 331
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: A0A563E0K1_9MICO (Hydroxyacid-oxoacid transhydrogenase n=2 Tax=Leekyejoonella antrihumi TaxID=1660198 RepID=A0A563E0K1_9MICO) HSP 1 Score: 80.5 bits (197), Expect = 2.420e-12 Identity = 86/289 (29.76%), Postives = 128/289 (44.29%), Query Frame = 1
Query: 397 AGPDLELVVEADCSWTKIGAQVG-RHGRTCLAIVDDG--PSGQADRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAANRRCLV----WHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQD----------SDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAG 1212
A P L+ V A +IGA+VG R R+ L + D G +G R L +GI + GV PT D I EA E A+ V +GGG ++DTAKA L G ++ P +G+G R P PL++VPT+AG+G+ + C+V H V P +++VDPT SL E T A + LS +++ + TA P SDV ++ + +GA L A+ +G+++ AR + + S AG
Sbjct: 16 AAPPLKFGVGA---LDEIGAEVGSRKARSALVLTDKGVAETGIPARVRASLEAVGIETEVYDRVGVEPTDDSIAEAVEFARARDWDCFVAVGGGSSIDTAKAVNLLTTHDGDLLDYITPP----IGQG-----RVPTNPLKPLIAVPTTAGTGSESTTICVVDLLSMHLKAGVSHPALRPV-------LAIVDPTTTISLPTEVTAASGMDVLSHALESYTSVRFDAKPATADPMARPAFCGANPISDVWCEMALKLVGA---NLRRAVMNGRDLEARTQMALASTYAG 282
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: A0A126QSC4_9DELT (Alcohol dehydrogenase n=2 Tax=Pseudodesulfovibrio TaxID=2035811 RepID=A0A126QSC4_9DELT) HSP 1 Score: 79.7 bits (195), Expect = 3.590e-12 Identity = 73/255 (28.63%), Postives = 115/255 (45.10%), Query Frame = 1
Query: 466 RHGRTCLAIVDDGP---SGQADRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSVS---VSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAG 1212
R G+ + I + G G R L K + F P +D +DEA + + G +VG+GGG T+D+AKA A + A+ G +++S G GG EP + DALP+V++PT+AG+G A+ ++ + E G G + +S+VDP S+ +QT + A +A LA T SD+L + +A LP A+ +G N+ AR ++ AG
Sbjct: 30 RGGKAMIVIGESGVMVRQGYLSRVQSLLSKQDVQTIVFDKIKPNPESDAVDEAAAICRDKGVDFVVGLGGGSTIDSAKAIATMAANKGKYWDYMQS------GSGGGQEPEN---DALPIVAIPTTAGTGTEADPWTVITKSGTDSF----EKIGWGNDATFPALSIVDPELMRSVPPKQTAYTGMDAFFHATEAYLA--------TCRQPASDMLA---LEAVHLIAHTLPQAVAEGDNLEARTIMAWACTAAG 260
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: E1JTK4_SOLFR (Iron-containing alcohol dehydrogenase n=1 Tax=Solidesulfovibrio fructosivorans JJ] TaxID=596151 RepID=E1JTK4_SOLFR) HSP 1 Score: 79.3 bits (194), Expect = 4.350e-12 Identity = 83/290 (28.62%), Postives = 128/290 (44.14%), Query Frame = 1
Query: 460 VGRHGRTCLAIVDDGPSGQADRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAGRLSVITPAPPTQLMARAAGSLL-ARHSYPSVCAMVFPHV 1326
+ HGR L + P + L LR+ G+ F G P + +A+ G +VGIGGGG +DTAKA A L ++ +L+ ++G+G R LP ++VPT+AG+GA A ++ P+ V V L + V+LVDP ++ T A L AL+ +++ ++ + A P +D L + G+ A GL AA DG ++ ARE + + S+ G A G L A H + VCA + P V
Sbjct: 25 IAAHGRAPLIVTGATPE-RHQALLKALRQAGLTVTVFPVAG-EPAVETAATGARLAREAGCDVVVGIGGGGALDTAKAVAALATNTAEILTYLE-----VVGQGRPLTERP-----LPCIAVPTTAGTGAEATANAVLTVPEARVKVSLRSAM---MLPEVALVDPLLSATMPPAVTAATGLDALTQLLESFVSDK-------ANPM-TDALCR---EGLPRAARGLAAAYADGNDLQAREDMALASLLGGMALANAKLGAVHGFAAPIGGLFGAPHGF--VCASLLPFV 286
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: A0A349HMZ5_9DELT (Alcohol dehydrogenase n=1 Tax=Desulfovibrio sp. TaxID=885 RepID=A0A349HMZ5_9DELT) HSP 1 Score: 79.3 bits (194), Expect = 4.690e-12 Identity = 70/269 (26.02%), Postives = 119/269 (44.24%), Query Frame = 1
Query: 442 TKIGAQVGRHGRTCLAIVDDGPS----GQADRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGGNSEPRSPAGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSV--SVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAGRLSVIT 1230
T++G G+ + ++D + G D+ L K I+ F P +D +DEA + A+ G IV +GGG T+D AKA A L + G C +++S G GG P +PA PL+++PT++G+G A++ ++ + + L G S +VS+VDP S+ T + A V+A L+ + P D L + + LP A+ +G+N+ R ++ S G ++
Sbjct: 20 TELGTMSLPKGKKAMIVIDKSGAMIEHGYLDKVQALLAKQEISTVVFDKISPNPNSDQVDEAAKTAREKGIDFIVALGGGSTIDAAKAIALLTTNVGKCWDYMQS------GSGGGVNPENPA---APLIAIPTTSGTGTEADQWAMISKSEGTEKISL-----GNDSTFPAVSIVDPELVVSVSPRMTAYNGINAFFHAVEAFLSTQ------HQPMSD-----MLALEAVHLSSHYLPMAIAEGENIEGRTVMAWSSTAGGMCETLS 263
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Match: A0A174Z2L2_9FIRM (1,3-propanediol dehydrogenase n=7 Tax=root TaxID=1 RepID=A0A174Z2L2_9FIRM) HSP 1 Score: 78.6 bits (192), Expect = 7.410e-12 Identity = 72/283 (25.44%), Postives = 121/283 (42.76%), Query Frame = 1
Query: 442 TKIGAQVGRHGRTCLAIVDDGP---SGQADRCLFELRKIGINCATFTARGVYPTADGIDEAREMAKRIGAASIVGIGGGGTVDTAKATARLHASSGGCKHFLKSPGGVLLGEGG---NSEPRSPAGDALPLVSVPTSAGSGAAANRRCLVWHPDDEVLVPLAESPGGGQSVSVSLVDPTFCTSLGNEQTVAMALTALSCCVDALLARELALGAGTAPPQDSDVLLQLGTRGIGAVAEGLPAALEDGKNVMARELLTMGSVCAGRLSVITPAPPTQLMARAAGS 1272
T +G Q R G+ + + G SG D + L K G++CA + G PT +DE AK G IV GGG +D AK G+LL GG + E +P ++LP++++PT+AG+G+ A R ++ D + + L+ G +++D SL + T A + AL+ +++ + S + I +++ L A+ DG+N ARE + + ++ AG P M+R G+
Sbjct: 17 TSVGEQAARFGKKAVLVCGKGSLRKSGVLDIIVSSLEKAGVSCAVYDRVGSDPTTSDVDEGAAFAKGNGCDVIVAAGGGSPLDAAKGI------------------GMLLTNGGKVTDYEKTAPEKESLPIIAIPTTAGTGSEATRYSVITDTDRNIKMLLSTD---GIIPKAAILDFAITKSLPSFMTAATGMDALTHAIESYI-----------NVNASPMTKMYSLEAIRLISKSLIPAVLDGRNEQAREDMLLAALYAGIAICSAPTALVHSMSRPLGA 267 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig9.150.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig9.150.3 >prot_P-littoralis_Contig9.150.3 ID=prot_P-littoralis_Contig9.150.3|Name=mRNA_P-littoralis_Contig9.150.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=468bp MMVPILRSCKVLGFAGVWCRVVCRCLVQCVAGRQIMRRRLASTVRQLPCRback to top mRNA from alignment at P-littoralis_Contig9:554723..560639+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig9.150.3 ID=mRNA_P-littoralis_Contig9.150.3|Name=mRNA_P-littoralis_Contig9.150.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5917bp|location=Sequence derived from alignment at P-littoralis_Contig9:554723..560639+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig9:554723..560639+ >mRNA_P-littoralis_Contig9.150.3 ID=mRNA_P-littoralis_Contig9.150.3|Name=mRNA_P-littoralis_Contig9.150.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1404bp|location=Sequence derived from alignment at P-littoralis_Contig9:554723..560639+ (Pylaiella littoralis U1_48)back to top |