mRNA_P-littoralis_Contig9.95.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A6H5KG41_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG41_9PHAE) HSP 1 Score: 353 bits (905), Expect = 3.660e-117 Identity = 174/196 (88.78%), Postives = 187/196 (95.41%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVPCV 650
MNTL+GVKGRDFVLLGGDSAFFRSVVIMDTEY KVVELS+N+LVA SGDQGDVEMFVEWLKRN +LM+LESSRPVG RTLAHFARRNLA+KLR QGAGQAVT L+GGW+EVA QP+LFWLDALGALQ VPFGAHGLASRFALSLLDNGFREGMSLDEARHLME+CFRQLERRYLVSSVGFS+KVVD+DGCRDV C+
Sbjct: 1 MNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVATSGDQGDVEMFVEWLKRNARLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALIGGWNEVACQPELFWLDALGALQDVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 196
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: D7FKH0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH0_ECTSI) HSP 1 Score: 355 bits (911), Expect = 9.230e-107 Identity = 176/198 (88.89%), Postives = 189/198 (95.45%), Query Frame = 3
Query: 57 TEMNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVPCV 650
++MNTL+GVKGRDFVLLGGDSAFFRSVVIMDTEY KVVELS+N+LVAASGDQGDVEMFVEWLKRN QLM+LESSRPVG RTLAHFARRNLA+KLR QGAGQAVT LLGGW+EVA QP+LFWLDALGALQ V FGAHGLASRFALSLLDNGFREGMSLDEARHLME+CFRQLERRYLVSSVGFS+KVVD+DGCRDV C+
Sbjct: 26 SDMNTLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDNVLVAASGDQGDVEMFVEWLKRNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLDALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDEARHLMETCFRQLERRYLVSSVGFSMKVVDKDGCRDVACI 223
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A1X2G7A8_9FUNG (Proteasome subunit beta n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G7A8_9FUNG) HSP 1 Score: 155 bits (392), Expect = 3.580e-41 Identity = 74/193 (38.34%), Postives = 124/193 (64.25%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
M L G+ G+DF LL D+ RS+V+M K +LS + ++ SG+ GD F E+++RN +L +++ + + +A F RR +A+ LR++ AV ++LGG+DE G+P+LFW+D LGA+ S+PF A G + F SL+D +REGM ++EA+ L++ C +L+ R++V+ F +K+VD+DG ++
Sbjct: 1 MECLFGITGKDFALLAADTISARSIVVMKGTEDKSRQLSPHSVLLYSGEPGDTVNFAEYIQRNIRLYSIQNGIELSPKAIATFTRREIADSLRSRHP-YAVNMILGGFDEKTGKPELFWIDYLGAMASLPFAAQGYGAYFCTSLMDRHYREGMDVEEAKKLLQQCINELKTRFIVNMPKFVVKLVDKDGVHEI 192
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: UPI00026585B1 (proteasome subunit beta type-2 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026585B1) HSP 1 Score: 152 bits (385), Expect = 4.300e-40 Identity = 70/193 (36.27%), Postives = 127/193 (65.80%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
M +L+G+K RDFVLL D++ RS++++ + K+ +LS+++ +A +G+ GD F +++ +N QL K+ + + + A+F R+NLA+ LRT+ A + LLLGG+D + +P+L+W+D LG+L VPF AHG F++ ++D +R M+++EA L+ +C +++ +R+L + F V+D +G RD+
Sbjct: 1 MESLIGIKCRDFVLLAADASVARSIMVLKQDEQKIFKLSDSLAMAVAGESGDTVQFADYIAKNIQLFKMRNGYGLSPKAAANFTRKNLADSLRTRNAYRC-DLLLGGFDSHSKEPELYWVDYLGSLAKVPFAAHGYGGIFSMGVIDAAYRADMTVEEAHSLIRACVKEIRKRFLGNMPVFKCVVIDTNGIRDL 192
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A7J7KPP8_BUGNE (Proteasome subunit beta n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KPP8_BUGNE) HSP 1 Score: 152 bits (384), Expect = 5.830e-40 Identity = 75/194 (38.66%), Postives = 126/194 (64.95%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVP 644
M L+GV+G+DFVL+ DS+ RS+V M ++ K+V +S+N+++ SGD GD F E++ +N QL K+ + + A+F RRNLAE LR++ A Q V LLL G+DE G P L+++D L ++ +PF HG S F+LS+ D + ++ +EA L+ C +++++R+LV+ F ++++ +DG +D+P
Sbjct: 1 MECLIGVQGKDFVLVAADSSNARSIVRMKEDHDKMVPISDNVVMLTSGDVGDCLQFSEYIAKNLQLYKMRNGYELSPEAAANFTRRNLAESLRSRNAYQ-VNLLLAGYDEKTG-PSLYYMDYLASMNKLPFAVHGYGSFFSLSIFDRYYTPDVTKEEAYELLNKCVQEIQKRFLVNMPRFKVRMISKDGIKDMP 192
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A8J1XMY1_OWEFU (Proteasome subunit beta n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XMY1_OWEFU) HSP 1 Score: 152 bits (384), Expect = 6.010e-40 Identity = 76/194 (39.18%), Postives = 125/194 (64.43%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVP 644
M L+G+KG+DFV++ D+ RS+V M ++ K+ +LS+ +++A SG+ GD F E++ +N QL K+ + + R A+F RRNLAE LR++ Q V +L+GG+DE G P LF++D L AL PF AHG S F LSLLD +R+ ++ + A L+ C ++++R++V+ F ++ +++DG D+P
Sbjct: 1 MECLIGIKGKDFVIVASDTISARSIVSMKQDHDKMFKLSDKIVMACSGESGDTVQFAEYISKNIQLYKMRNGYELSPRAAANFTRRNLAEYLRSRTPYQ-VNMLIGGYDETDG-PSLFYMDYLAALIEAPFAAHGYGSFFVLSLLDRYYRDDVTQEGAIKLLHQCIDEVQKRFIVNLPTFKVRCINKDGITDLP 192
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: UPI001E1D8910 (proteasome subunit beta type-2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8910) HSP 1 Score: 152 bits (384), Expect = 6.370e-40 Identity = 72/194 (37.11%), Postives = 125/194 (64.43%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVP 644
M L+G++G+DFVL+ D+ RS+V M +Y K+ +L++N+L+ +G+ GD F E++ +N QL K+ + + A+F R+NLA+ LR+Q V LLL G+D+ G P L+++D L +L +PF AHG + F +S++D + E ++L+EA+ L+ C ++ +R++V+ F ++ VD+DG RD+P
Sbjct: 1 MECLIGIQGKDFVLVAADTVSARSIVSMKQDYDKMFKLNDNLLMLVTGESGDTVQFAEYIGKNIQLYKMRNGYELSPSAAANFTRKNLADYLRSQ-TPYMVNLLLAGYDKDEG-PSLYFMDYLASLNKLPFAAHGYGALFTMSIMDRHYYEDITLEEAKELLSKCVNEIRQRFIVNMPTFKVRCVDKDGVRDLP 192
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A0D2X0E4_CAPO3 (Proteasome subunit beta n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X0E4_CAPO3) HSP 1 Score: 151 bits (381), Expect = 1.630e-39 Identity = 75/193 (38.86%), Postives = 124/193 (64.25%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
M+ ++ + G+DFV+ D+ RS+V+M +++ K+V++S ++L +G GDV F E++++N +L ++ + + AH+ R LA LR+ GA Q V LLL G+D + Q +L+++D L AL VPFGAHG AS F LSLLD + ++LDEA LM+ C ++++R +++ F+++VVD G RDV
Sbjct: 1 MDCIIAISGKDFVVAAADAMAARSIVVMKSDHEKMVQMSPHLLQVCNGPSGDVVQFSEFIQKNIKLYQMRNGFALSPHAAAHYTRDQLARALRSSGAYQ-VNLLLAGYDTINKQAELYFMDYLAALVKVPFGAHGYASHFVLSLLDRYYTPEVTLDEALRLMKMCIAEVQKRLVINLPKFTVRVVDAQGTRDV 192
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A1Y1NKF7_PHOPY (Proteasome subunit beta n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1NKF7_PHOPY) HSP 1 Score: 150 bits (379), Expect = 3.470e-39 Identity = 73/196 (37.24%), Postives = 127/196 (64.80%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDVPCV 650
M LLG+K RDFV++ D S+++M T+ +K+ LS +++A SG+QGD F E++ +N QL K+ + +G + A+F RRNLAE LR++ A V +LL G+D+ G P L+++D L +L +V F +HG F+L+++D + E ++ +EA +M+ C R++ +R +V+ F ++++D+DG RD+P +
Sbjct: 1 MECLLGIKCRDFVIVAADMTKAHSIMVMKTDENKLHTLSNKIVMAISGEQGDTTQFAEYIAKNIQLYKMRNGYELGAKAAANFTRRNLAEGLRSRNAYH-VNMLLAGYDDQEG-PQLYFVDYLASLANVKFASHGYGGFFSLAIMDRYYSEDLTPEEAYDIMKKCIREVHQRLIVNLPNFKLQIIDKDGIRDLPAI 194
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Match: A0A163JZA9_ABSGL (Proteasome subunit beta n=2 Tax=Absidia TaxID=4828 RepID=A0A163JZA9_ABSGL) HSP 1 Score: 149 bits (377), Expect = 5.670e-39 Identity = 72/193 (37.31%), Postives = 125/193 (64.77%), Query Frame = 3
Query: 63 MNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVAASGDQGDVEMFVEWLKRNTQLMKLESSRPVGVRTLAHFARRNLAEKLRTQGAGQAVTLLLGGWDEVAGQPDLFWLDALGALQSVPFGAHGLASRFALSLLDNGFREGMSLDEARHLMESCFRQLERRYLVSSVGFSIKVVDRDGCRDV 641
M L G+ G+DF LL D+ RS+V+M K +LS N ++ SG+ GD F E+++RN +L + +S + +++A+F RR +A+ LR++ +V ++LGG+D G+P+LFW+D LGA+ S+P+ A G + F SL+D ++ M++DEA+ L++ C +L+ R++V+ F++K+V +DG +DV
Sbjct: 1 MECLFGITGKDFTLLAADTVQARSIVVMKGTEDKSRQLSPNTVLLYSGEPGDTVNFAEYIQRNIKLYSIRNSIELSPKSIANFTRREIADSLRSKHP-YSVNMILGGYDVKEGKPELFWIDYLGAMASLPYAAQGYGAYFCTSLMDRYYKPDMNVDEAKALLQRCLDELKTRFIVNMPKFNVKLVSKDGVQDV 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig9.95.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig9.95.2 >prot_P-littoralis_Contig9.95.2 ID=prot_P-littoralis_Contig9.95.2|Name=mRNA_P-littoralis_Contig9.95.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp MTMLTEMNTLLGVKGRDFVLLGGDSAFFRSVVIMDTEYHKVVELSENMLVback to top mRNA from alignment at P-littoralis_Contig9:377236..381028- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig9.95.2 ID=mRNA_P-littoralis_Contig9.95.2|Name=mRNA_P-littoralis_Contig9.95.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3793bp|location=Sequence derived from alignment at P-littoralis_Contig9:377236..381028- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig9:377236..381028- >mRNA_P-littoralis_Contig9.95.2 ID=mRNA_P-littoralis_Contig9.95.2|Name=mRNA_P-littoralis_Contig9.95.2|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig9:377236..381028- (Pylaiella littoralis U1_48)back to top |