mRNA_P-littoralis_Contig9.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig9.13.1
Unique NamemRNA_P-littoralis_Contig9.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 9.030e-180
Identity = 246/327 (75.23%), Postives = 280/327 (85.63%), Query Frame = 2
Query:  236 QTKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAKGVET---EVEVENGFASRRKRLITSFVYRKQIKDITWLS 1207
            Q KV+ACLQ+LARGN F DIYHMSFIS+ TA ATFH F R+FAREMY EHI+LPTGDYQ KVM++Y+RLGF+GA GSTDVTH+ WG CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG   Q KGCYLLVDNGYHKW TL+ P+KY I++ D  FS RLES RKDVEC+FGIVKGRFRI KL+IPYHK+EDIDNVFFTCCILHNMLHSYDNK EM EEPNWAG+AGLHNAWEH+P  D SSVGAKG      +VEVE+GF +RRK+LI SFVYRK   DI WLS
Sbjct:  156 QLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 482          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 5.510e-167
Identity = 228/325 (70.15%), Postives = 273/325 (84.00%), Query Frame = 2
Query:  239 TKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAK-GVETEVEVENGFASRRKRLITSFVYRKQIK-DITWLS 1207
            T+V+ACLQ+L+RGNVF DIYHMSFIS  T  +TFH FC++FA E+Y E++YLPTG+   KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY  DG   +EKGCYLLVDNGYHKW TL+ P+K  I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+DN+G+M EEPNWAGSAGLHNA + DP TD+SSVG+  G    VEVE GF + R +L+T+FVYR++ K DI WLS
Sbjct:   82 TQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 488 bits (1255), Expect = 1.280e-165
Identity = 228/326 (69.94%), Postives = 273/326 (83.74%), Query Frame = 2
Query:  236 QTKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAK-GVETEVEVENGFASRRKRLITSFVYRKQIK-DITWLS 1207
            + KV+ACLQ+L+RGNVF DIYHMSFIS  T  +TFH FC++FA E+Y E++YLPTG+   KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR+DKAVTRIRTDP+YTE+ Y LY  DG   +EKGCYLLVDNGYHKW TL+ P+K  I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCCILHNMLHS+DN+G+M EEPNWAGSAGLHNA + DP TD+SSVG+  G    VEVE GF + R +L+T+FVYR++ K DI WLS
Sbjct:  172 ELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 384 bits (986), Expect = 8.520e-129
Identity = 180/240 (75.00%), Postives = 204/240 (85.00%), Query Frame = 2
Query:  497 CPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAKGVET---EVEVENGFASRRKRLITSFVYRKQIKDITWLS 1207
            CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR+D AVT+IR DPIY+E+ + +Y+ADG   Q KGCYLLVDNGYHKW TL+ P+KY I++ D  FS RLES RKDVEC+FGIVKG FRI KL+IPYHK+EDIDNVFFTCCILHNMLHSYDNK EM EEPNWAG+AGLHNAWEH+P  D SSVGAKG      +VEVE+GF +RRK+LI SFVYRK   DI WLS
Sbjct:    2 CPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWLS 241          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 2.810e-127
Identity = 189/325 (58.15%), Postives = 237/325 (72.92%), Query Frame = 2
Query:  242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAKGVETEVEVENGFASRRKRLITSFVYRKQIK-DITWLS 1207
            KV+ACL +L RGNVF  IY++S++S PT Q  FH FC HFA EMY EHI+LP+ +     +VM +YE+LGF GA+GSTDVTH+ W  CPYNQ RS+TGKEG PT+ YQVTV+H  R LAVT GFTG+TNDKTII  D+AV RIRTD  Y E+ + ++  DG T   KGCYL+VDNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+K RFRI KLA+ Y K+E +D VFFTCCILHNMLH++D  G + E+ NW GSA L N   H+   D SSVG K +  + +VE   A  +++L T+F+YRK+ K DI WLS
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHN--LDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLS 449          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 4.590e-125
Identity = 188/332 (56.63%), Postives = 225/332 (67.77%), Query Frame = 2
Query:  260 QVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAKGV----------------ETEVEVENGFASRRKRLITSFVYRKQIKDITWLS 1207
            QVL +GN F D+  +S +S   AQ TFH FCRHFA EM+ EHIYLPTG Y  +VM  + +LG+TGA GSTDVTH+ W  CP+   RSFTGKEG+PTIAY VTVDH  R LAVT GFTGATNDKTIIR+D  V +IRT   YTER Y L  A+G  R  +GC+L+VDNGYH+W TL+AP+KY     DT FS  LES RKDV C        FRI KL +PYHK+E +DN+FFTCCILHNMLH++D      E  +W GSAG H+AWEHDPLTD++SVG+KGV                    E     A  +++LI SF +RK+I DITWLS
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLS 365          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 9.390e-124
Identity = 193/353 (54.67%), Postives = 237/353 (67.14%), Query Frame = 2
Query:  242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYT----------------------------ERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAKGVETEVEVENGFASRRKRLITSFVYRKQIK-DITWLS 1207
            KV+A L +L RGN F  IY MS++S  T Q  FH FCRHFAREMY E I+LPT +      VM +Y+RLGFTGA+GS DVTH+AW  CPYNQARS+TGKEG+PTIAYQVTVDH  RA+AVT GFTG+TNDKTI+ +D AV +I TD  YT                            E+T+++Y+ DG T   KGCYLLVDNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y  +E IDNVFFTC ILHNMLH++D   ++ E  NW  SAG+      +P  D  SVG K V  + ++E     R+++L TSF YRK+ K DI WLS
Sbjct:   85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLS 437          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 2.960e-115
Identity = 170/289 (58.82%), Postives = 211/289 (73.01%), Query Frame = 2
Query:  242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPT---GDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAK 1099
            KV+A L +L RGN F  IY +S++S  T Q  FH FC+HFAREMY EHIYLP+   G+    VM +Y+RLGF+GA+GS DVTH+ W  CPYN ARS+TGKEG PT+ YQVTV+H  RA+AVT GFT +TNDKT + +D  V +IRTD  YTE+T+++Y+ DG T   KGCYLLVDNGYHKW  LM PTKY + + D +FS RLES RKDVEC+FGI+KG FRI K+A+ YH++E IDNVFFTCCILHNMLH++D   ++ E   W  SAG       +   D S+VGAK
Sbjct:   98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELD-HVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAK 385          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 1.700e-114
Identity = 176/325 (54.15%), Postives = 221/325 (68.00%), Query Frame = 2
Query:  242 KVMACLQVLARGNVFRDIYHMSFISVPTAQATFHSFCRHFAREMYHEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAKGVETEVEVENGFASRRKRLITSFVYRKQIK-DITWLS 1207
            +V+A L +L +GN F  I+ MS++S  T Q  FH FCR FAREMY EHI+LP  +      VM +Y+RLG                 CPYNQARS+TGK+ +PTIAYQVTVDH  RA+AVT GFTG+TNDKTI+ +D AV +IRTD  YTE+T++LY+ DG T   KGCY L DNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y  +E IDNVFFTCCILHNMLH++D   ++ E  NW  SAG+      +P  D  S G K V  + ++E G   R+++L TSF YRK+ K DI WLS
Sbjct:   20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLS 327          
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 2.550e-109
Identity = 163/280 (58.21%), Postives = 205/280 (73.21%), Query Frame = 2
Query:  371 MYHEHIYLPTGDYQTK--VMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPTKYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGAKGVETEVEVENGFASRRKRLITSFVYRKQIK-DITW 1201
            MY EHI+LPT +      V+ +Y+RLGFTGA+GS DVTH+AW  CPYNQARS+TGKEG+PTI YQVTVDH  RA+AVT GFTG+TNDKT + +D AV +IRTD  YTE+T+++Y+ DG T   KGCY+LVDNGYHKW  L+ P+KY + + D +FS RLES RKDVEC+FGI+KGR RI  LA+ +  +E IDNVFFTCCILHNMLH++D   ++ E  NW  SAG+      +P  D  SVG K V    +VE G A R+++L TSF YRK+ K DI +
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig9.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE9.030e-18075.23Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE5.510e-16770.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.280e-16569.94Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE8.520e-12975.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE2.810e-12758.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE4.590e-12556.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE9.390e-12454.67DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE2.960e-11558.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE1.700e-11454.15DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI2.550e-10958.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig9contigP-littoralis_Contig9:41729..44782 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1592
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue6.49e-113
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1014
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig9.13.1prot_P-littoralis_Contig9.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig9 42566..44400 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791787.757191-UTR-P-littoralis_Contig9:41728..418121680791787.757191-UTR-P-littoralis_Contig9:41728..41812Pylaiella littoralis U1_48UTRP-littoralis_Contig9 41729..41812 +
1680791787.7717428-UTR-P-littoralis_Contig9:42453..425651680791787.7717428-UTR-P-littoralis_Contig9:42453..42565Pylaiella littoralis U1_48UTRP-littoralis_Contig9 42454..42565 +
1680791787.8118937-UTR-P-littoralis_Contig9:44400..447821680791787.8118937-UTR-P-littoralis_Contig9:44400..44782Pylaiella littoralis U1_48UTRP-littoralis_Contig9 44401..44782 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791787.7832808-CDS-P-littoralis_Contig9:42565..426131680791787.7832808-CDS-P-littoralis_Contig9:42565..42613Pylaiella littoralis U1_48CDSP-littoralis_Contig9 42566..42613 +
1680791787.7926292-CDS-P-littoralis_Contig9:42845..433731680791787.7926292-CDS-P-littoralis_Contig9:42845..43373Pylaiella littoralis U1_48CDSP-littoralis_Contig9 42846..43373 +
1680791787.801969-CDS-P-littoralis_Contig9:43962..444001680791787.801969-CDS-P-littoralis_Contig9:43962..44400Pylaiella littoralis U1_48CDSP-littoralis_Contig9 43963..44400 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig9.13.1

>prot_P-littoralis_Contig9.13.1 ID=prot_P-littoralis_Contig9.13.1|Name=mRNA_P-littoralis_Contig9.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp
MVEGSFQKSQAVNQTKVMACLQVLARGNVFRDIYHMSFISVPTAQATFHS
FCRHFAREMYHEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGC
CPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRFD
KAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKWNTLMAPT
KYAIEKGDTVFSNRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDN
VFFTCCILHNMLHSYDNKGEMGEEPNWAGSAGLHNAWEHDPLTDFSSVGA
KGVETEVEVENGFASRRKRLITSFVYRKQIKDITWLS*
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mRNA from alignment at P-littoralis_Contig9:41729..44782+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig9.13.1 ID=mRNA_P-littoralis_Contig9.13.1|Name=mRNA_P-littoralis_Contig9.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3054bp|location=Sequence derived from alignment at P-littoralis_Contig9:41729..44782+ (Pylaiella littoralis U1_48)
GTGGCGCTGGTGAAGGAGAGGGACTGGTTTCCAACGGGGAAGAAGGACGT AGCAGGTCGTGCAAGCATCCCAGTGGAGCTGAAGGTCAGCCCTTATTTTC TATCATGATGTTTAAAACTAAGATGATTTTATACAGCAGTAGATGTTCCC GACTTTTGGTGGTATATGCTGCGAAGTACTTCGTTATACGAAGAACACGA AGAAAAACACACAGCAGTACTGCTTGCCTGCCCATGCTTCTCTCGGTGTA TTGAAGCGTTTTCAAGCATCCCAGTGGAGCTGAATGTCAGCCCTCGTTTC CTATCATGTTGTAGTTCCAAACGAAGATGATTTTAAGGCCACCGGGGAAT AGGGTGCAAACAGCTCGCAGACTTTCGACAAACCCCTGATTATTCTGGGT TTTGAAAGTCTATCTTTTATACATACGAATCTACCACCTCAGGATGCTCC CGGAGGCAGTCGCTGTGAGCAATAAGTAGTGTCTTCGATCCAAGTCCTTG CGACATGCTACAGATTCACCGCTTGCGACTTTTGGAACGAGCCCTCCATC ATCTAGTTCTGCGAGCCACGATGCGTGGTTCGGATGCTGCTGTAGCAGCC ATATTTTTGAACGCTTCCAGCACACAGCACCCGAATAAAACGCAAAGCCA ACGTGAGTACCAGCGAACGCTCATTCAGCACAATGATCTCCTCACGTACC TTGCCCATCGCCGTGATTGATGAAGTCCGTAGGTACTCACGTATGCCCCG TATTTTCGGGTGCTGTATGCTGGAAGCGTTCAAAAATACGGCTGCTACAG CAGCATCCGAACCACGCCTCAAGGCTCGCAGAACTAGATGGTGGAGGGCT CGTTCCAAAAGTCGCAAGCGGTGAATCAAACGAAGGTGATCATGCAATTT GCTTGGCCATCAAGAACGACGAGGTCACATGTGGTTTAATTTGTTTTCAA CAGCGCGGGTGTGCGTCGCAATATTAAGGGCAGTGTTCCTGCGTAATCTT TGTGACACGTTTCATGTGTTCGGTATTTGAGCGATTCCCGATATATAGCC CGGAAGCAGTTTCCCCTGATTTTCCGCACACTTCCCACGTTGTCCGTTTA TTTGTACTCCTGTTTAGGTCATGGCTTGCCTGCAGGTGCTGGCCAGGGGG AACGTCTTTCGAGACATCTACCACATGTCTTTCATTAGCGTGCCGACAGC TCAGGCGACCTTCCACAGCTTCTGCAGGCACTTCGCCAGAGAGATGTACC ACGAACACATCTATCTACCGACAGGAGATTATCAGACGAAGGTCATGAGC GAGTACGAGCGCCTTGGCTTCACAGGCGCGATCGGGTCTACGGATGTCAC CCACCTCGCGTGGGGCTGTTGCCCCTACAACCAAGCCCGTTCTTTCACAG GAAAAGAAGGGTATCCTACCATCGCATATCAAGTGACCGTCGATCACACT AAACGCGCGTTGGCAGTGACACCGGGCTTCACGGGCGCGACGAATGACAA GACGATCATCCGTTTCGACAAAGCTGTCACCCGGATCCGGACCGACCCGA TCTACACCGAGCGCACGTACAACCTCTACGACGCGGACGGGGCGACACGC CAGGAGAAGGGGTGCTACTTGCTGGTGGACAATGGGTATCACAAGGTTGG TTGTTGCCGAAAGAGAAGGTTTGATTTTGTTGTGCCACCTTATACGTTGG AAGAACAAGCTACCTTGGCCCTTTTGTGACTGAGCCACGAAAAAGATCCC TTTGCAAGTCCTATGTCTTCGATTCGCTTTTTCGCGAAAGGAAAGCTGGT ACGCGACGCGTAGCTCCGAAGCATTCGTGAAGATGAACTTTTGATCTTTC ACGCTCGTATGCGAGCCTGTGCCTGCATATTTCGGGCATCTTTCGGGCAG TGGTGGTATGCCGAGCTGTGTGTAGCCTCTGTCGTTTTCGAGTGGGGATA ATCTTTGTGCAAGGCGGTGTGTTGGTGTGGATGTATGTATGGATAATCAG GGTCGGGTTCGCAGAGGAACGTGCCGCCCTAGGATTAAGGTTCCGGGCCA AAGTCCGTCGCTAAACCCCTGTCACCAACAGGTTAACTCGATAGTTAATG TGCGTTCATCATCGCCAGCATAAACGGGCGGGCGCGTTCGTGGAACGTAT CCAAGACCGTATTCCATCCGCCAACAGCCTCCAAGCCCCCCCCCTTCCTC CCCTCCCCCCCCCCCACCGCCGTCGTCTTCGCAGTGGAACACTCTCATGG CCCCAACAAAGTACGCAATAGAGAAGGGCGATACGGTGTTCTCCAACAGA CTGGAGAGCTCGCGCAAGGATGTGGAGTGCTATTTTGGCATCGTGAAAGG CCGCTTCCGCATCAACAAGCTAGCGATCCCGTACCACAAGAAGGAAGACA TCGACAACGTTTTCTTCACCTGCTGCATCCTCCACAACATGCTGCACAGC TACGACAACAAGGGCGAGATGGGTGAGGAACCCAACTGGGCAGGGAGCGC GGGCCTGCACAACGCATGGGAGCACGACCCGTTGACGGACTTCAGCTCGG TGGGGGCGAAGGGCGTTGAGACGGAAGTAGAGGTAGAGAACGGCTTCGCG TCGAGGAGGAAGCGGCTAATCACGAGCTTCGTGTACCGCAAGCAGATTAA AGACATCACGTGGCTTTCCTAGGTAGTCTGCAACGGTGTGCCTTGTGCTC GAAACCAATCGTGGAGTCGTGCATACAGATCGGGAATGGGTGGGAGGGGC AGCCTTTGCGCTTTGTGTCTTGACTTACACCAAATACTTAGATGGAACTA AGCGCGGACTGTGGGCGGCGCGTGCTCGTGTGTGTATTTCAGTCTATTTG GAGTAAACACATAATAGAAGGGGCTATCACCTCTTTGCTCTTTTTATTTG ACCGATACAGCCAACGACTACGAATTGCGAAAATAAGGCACCAAACGTGC AGCGACAGGCGCGTACGTGAATGGGGGGCTGATATCTCTGGCTCTTTTGA TGTGGCCAGTGCACCCGACGCCCGCAACCAGCACGAAAACACAAACGCTA ACAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig9:41729..44782+

>mRNA_P-littoralis_Contig9.13.1 ID=mRNA_P-littoralis_Contig9.13.1|Name=mRNA_P-littoralis_Contig9.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1014bp|location=Sequence derived from alignment at P-littoralis_Contig9:41729..44782+ (Pylaiella littoralis U1_48)
ATGGTGGAGGGCTCGTTCCAAAAGTCGCAAGCGGTGAATCAAACGAAGGT
CATGGCTTGCCTGCAGGTGCTGGCCAGGGGGAACGTCTTTCGAGACATCT
ACCACATGTCTTTCATTAGCGTGCCGACAGCTCAGGCGACCTTCCACAGC
TTCTGCAGGCACTTCGCCAGAGAGATGTACCACGAACACATCTATCTACC
GACAGGAGATTATCAGACGAAGGTCATGAGCGAGTACGAGCGCCTTGGCT
TCACAGGCGCGATCGGGTCTACGGATGTCACCCACCTCGCGTGGGGCTGT
TGCCCCTACAACCAAGCCCGTTCTTTCACAGGAAAAGAAGGGTATCCTAC
CATCGCATATCAAGTGACCGTCGATCACACTAAACGCGCGTTGGCAGTGA
CACCGGGCTTCACGGGCGCGACGAATGACAAGACGATCATCCGTTTCGAC
AAAGCTGTCACCCGGATCCGGACCGACCCGATCTACACCGAGCGCACGTA
CAACCTCTACGACGCGGACGGGGCGACACGCCAGGAGAAGGGGTGCTACT
TGCTGGTGGACAATGGGTATCACAAGTGGAACACTCTCATGGCCCCAACA
AAGTACGCAATAGAGAAGGGCGATACGGTGTTCTCCAACAGACTGGAGAG
CTCGCGCAAGGATGTGGAGTGCTATTTTGGCATCGTGAAAGGCCGCTTCC
GCATCAACAAGCTAGCGATCCCGTACCACAAGAAGGAAGACATCGACAAC
GTTTTCTTCACCTGCTGCATCCTCCACAACATGCTGCACAGCTACGACAA
CAAGGGCGAGATGGGTGAGGAACCCAACTGGGCAGGGAGCGCGGGCCTGC
ACAACGCATGGGAGCACGACCCGTTGACGGACTTCAGCTCGGTGGGGGCG
AAGGGCGTTGAGACGGAAGTAGAGGTAGAGAACGGCTTCGCGTCGAGGAG
GAAGCGGCTAATCACGAGCTTCGTGTACCGCAAGCAGATTAAAGACATCA
CGTGGCTTTCCTAG
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