mRNA_P-littoralis_Contig897.23.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: D8LK46_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK46_ECTSI) HSP 1 Score: 1064 bits (2751), Expect = 0.000e+0 Identity = 651/1102 (59.07%), Postives = 758/1102 (68.78%), Query Frame = 1
Query: 256 SNDSVGANRGGAKSSNGEES--GPAHEMGWDAEGEQGVKPPLSSSGLTSAGSGSCRRCLAEAGADRKRSLGGGKDSGGVSDMAVVQYHHTCCRTSPQQL--DVPASLTPHGPGPYSCDQQQKRGASTSG----------MELGQELVVGDLATPLTSAGAGDVGAEHDATPLQSRPS----RGGGFA--------LSSVPGGDAGGD-GTEGAVENPSTSETEDNSGVGRGGLERKDTITWESFLATITDSDGIKGADGSV--IITALGSASDSPSPVEVQSPRDGCSEGIMVEGHSTLDGSKTNIPTARRAQYLQTMESKAGAVPWNNTSGVRIEGGDDGSISET----ESAELPQLSEGRTV-TPSVRRLLSDLSDTTLSPRTKH-LDIGRSHSLSSVGMGTVSGMPKTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLSTTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENPGVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTTDLSIGLRSNQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEVPAFHMELSVSRSLSATPSTSSGPTPIGTPSTSGRRSSKFSTSGRDRRRRATVDAEASGQMPQPVIRGWARTQSDQYESGGRRYIALFKNAGPDLQDNIVYFFGDAGMCDKMIGHHVSTSHGYLALSEVTRVQLRQEEGTGGERAIALQTETGKYMKETVIVPEEPREYMSWTEHIKARSTWEAFDEFSGCHIPECCPSSAYNVSADDTPITTSIGDTAFHSVNTVDSNVDGMASSVSDAIANSSIGIQD------------DVFVAVGQPLA--TPSVAGTADGKGESP----GSDVYGRSESSETQPLGAGRTNGE--SGGALEMKRMTTTPSSETEA----DDSGNAGSGSIVSGPPALVLPSTTIEEGPTTPHTDVE 3384
S+ SV A RGGA EE GPA MGWD EG Q +KPP +SS T +C C A GA RK S+ +++ SD A+ Q+HH C +P + D P L P G S + G++ +G MEL E VV TPL SAGAGDVGAEHDATPLQSR GGGF DA G+ ++GA ++ + G G GGL+RKDTITWESFLA IT +D K A G A G+ SDS PV ++ + G EG L GS P R +YL+ M S AG V WN+ ESA LP+LSEG+ V +V+RLLSDLSD T SPR +H +D+GRS S+SSVGMG+++ + K ERGVNKFNV+PKDG+AYLIDN L+ D+A+ IC FL + EGLSKRRLGEYFGRD+PKAQEVLRLFLK+LKFKNASLDEALR+MV+RFRLPGEAQQMDR+ME+FA RY EENP VFSCSDTAWVLAFGLMMLNTDMYNRNIKE +KMTEAEFVKNHRGIDQG DP KELLEGMYRRIK SEIRM EGDMYESEVITFVAPK+SGWLKKKSTGYVGKWKRHWFVLNDAVLYYF+ PQHQ+EAPRCIIPLEGINI+PIG TDLSIGLR+NQG+VKSVK +NG MQQG HRSF LRA++ +ERDIWVDALRAEVPAFHMELS SRSLSATP+TS PIGTPS SGRRS KFS SGR RRR AT+D EAS +M PVIRGWARTQSDQ++SGGRRYIALF++ GPD QDN++YFFGDA MCDKMI H+ TSHG L LS+VTRVQL+QEEG GG RAIALQT GK++KE VIVPEE RE+++WT +IK ECCP SAY+++AD TP + S+G TAF SVNTVDSN DG+ASSVS ++ NS+I I D DVFV+VG P T SVAGTADGK GS+++ RSESS TQP+ A +G A E+ R+ TTPS+ETEA + + S PP + S + EG + P TDVE
Sbjct: 22 SSGSVTATRGGAAELTDEEGEVGPAIGMGWDVEGGQVLKPPRNSSISTG---DACIGCPAADGAQRKPSIQSPQEA---SDAALFQHHHACGGANPDNIPGDGPVPLAPFGTSAISI----RSGSAAAGVHMHKXXXXXMELEPEAVV---VTPLASAGAGDVGAEHDATPLQSRHKGSARSGGGFGSPRSXXXXXXXXXXXDARGETASDGAASVSGVDDSLSSVGEGPGGLKRKDTITWESFLANITVTDEAKEAGGGAKGAEAAAGACSDSSPPVAMR-----LTSGAASEGVKGLLGSAAEQPLTARTRYLRAMASNAGDVRWNDDLDDEDRNXXXXXXXXXXXXXESAGLPELSEGQLVHRANVQRLLSDLSDRTFSPRARHPVDLGRSQSMSSVGMGSINSVRKIMERGVNKFNVNPKDGIAYLIDNGLVTDSAQGICSFLCSAEGLSKRRLGEYFGRDNPKAQEVLRLFLKELKFKNASLDEALRAMVMRFRLPGEAQQMDRIMESFAVRYHEENPYVFSCSDTAWVLAFGLMMLNTDMYNRNIKESDKMTEAEFVKNHRGIDQGKDPAKELLEGMYRRIKASEIRMAEGDMYESEVITFVAPKKSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFLAPQHQDEAPRCIIPLEGINISPIGATDLSIGLRTNQGFVKSVKMADNGTMQQGTHRSFTLRADTNSERDIWVDALRAEVPAFHMELSASRSLSATPATSXXXXPIGTPSESGRRSGKFSASGRTRRR-ATIDLEASSKMQPPVIRGWARTQSDQHQSGGRRYIALFRDIGPDQQDNVIYFFGDAAMCDKMIEQHLRTSHGSLNLSDVTRVQLQQEEGGGGGRAIALQTGAGKHVKEVVIVPEEQREFLAWTRNIK-----------------ECCPGSAYSIAADCTP-SASVGATAFPSVNTVDSNGDGVASSVSVSV-NSAIAIADHIGLHDPPAAADDVFVSVGIPATSTTESVAGTADGKXXXXXXXEGSELHTRSESSVTQPVDAAAXXXXXGTGAACEVNRVNTTPSAETEAYGRFEHHAVSASAPEPQSPPRVGSASRIVREG-SMPGTDVE 1084
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: A0A835YWD7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD7_9STRA) HSP 1 Score: 407 bits (1046), Expect = 5.990e-116 Identity = 239/526 (45.44%), Postives = 310/526 (58.94%), Query Frame = 1
Query: 1378 KTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLSTTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENP-GVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKE-----------------SEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTTDLSI-----------GLRSNQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEVPAFHMELSVSRSLSATPSTSSGPTPIGTPS----TSGRRSSKFSTSGRDRRRRATVDAEASGQMPQPVIRGWARTQSDQYESGGRRYIALFK---------------------------------NAGPD-------------LQDNIVYFFGDAGMCDKMIGHHVSTSHGYLALSEVTRVQLR 2718
K V KFN +PKDG+ YL++ ++ +T +D+C+FL GLSKR++GEYFGR+ Q+V LFL L FK +LDEALR MVVRFR+PGEAQQ+DR+ME FA R+ +NP +FSC DTA++LAF LMMLNTDMYNRN++EGEKMT +F N+RGIDQG D PKELL+GMY R ++ +EIRMDEGDM+ESEVITFVAPK SGWL+KKS G WKRHWFVL D VLYYF PQ +EAPRCIIPLE I + P+G TDL+I G VKSVK +++G M+QG H+ FVLRAE ERD W+ LR+E A E + S T G + G TS + S G+ A V + + ++P P +RGWARTQ++ + RRY A+FK +AGP L+ +++YFFG + MCD+M+ + TSHG + L++V ++LR
Sbjct: 706 KVRTTAVTKFNANPKDGIRYLVEQSVIRETPQDVCEFLVHETGLSKRKMGEYFGRNSAFHQQVFELFLGHLDFKGLTLDEALRRMVVRFRMPGEAQQIDRIMEHFAKRWFSDNPDSMFSCVDTAYILAFSLMMLNTDMYNRNLREGEKMTVEQFCNNNRGIDQGKDLPKELLDGMYARSRQYXXXXXXXXXXXXXXXXNEIRMDEGDMFESEVITFVAPKISGWLRKKSNGVFAGWKRHWFVLVDGVLYYFFAPQ--DEAPRCIIPLERITVQPVGKTDLTITAXXXXXXXXXXXXXXXGLVKSVKMMDDGRMEQGSHKEFVLRAEKQDERDRWLLGLRSEASASAAEPLLEAS---TTPARGGSSHKGNKHMRRRTSFEKQRSSSHKGQGAHAAADVKKQVNVRVPPPCLRGWARTQNEGGPTSSRRYCAIFKGVESAGGPFSPLSDSTSHSTSPTVTSDIPEGDADAGPTRGLIHEATGSSSCLRLDVLYFFGSSEMCDRMVDQQLHTSHGRINLADVVSLELR 1226
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: A0A7S2SP39_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP39_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.080e-74 Identity = 165/455 (36.26%), Postives = 258/455 (56.70%), Query Frame = 1
Query: 1357 GTVSGMPKTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFL-STTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENPGV-FSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTTDLSIGLRSNQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEVPAFHMELSVSRSLSATPSTSSGPTPIGTPSTSGRRSSKFSTSGRDRRRRATVDAEASGQMPQPVIRGWARTQSDQYESGGRRYIALFKNAGPDLQDNIVYFFGDAGMCDKMIGHHVSTSHGYLALSEVTRVQL 2715
G+V+ ++ KFN+ P DG+ +L++ L+ T + + ++L +GLSKRRLGEY G QEVL FL + F +LD+ALR ++ FRLPGEAQQ+DR++E F+ RY E NP FS +DT ++LAF L+MLNTD++N NI E +KM F++N++GID G D P+E L Y+RIK+ EIRM+EGD +E +V+TF+AP ++GWL K++ G + +WKRHWFVL++ VLYYF P +E PR I+P++ + + + L ++ +K K ++NG M+ + + F +RA + ER+ W +ALR E+ ++ + R A + R + G+D R + ++P PV +GW + + D+ + +RY+AL +Y+F D+M+ T G L L V +V +
Sbjct: 122 GSVTMAATAFKQAATKFNIKPSDGINFLVEKRLVEGTPKSVARYLHKRADGLSKRRLGEYLGNVKDFNQEVLTHFLAEYSFAETTLDDALRVLLRDFRLPGEAQQIDRILEKFSRRYFETNPQCGFSNADTVYILAFSLIMLNTDLHNPNIPEAKKMKLDGFLRNNKGIDDGKDVPEETLCIYYQRIKDDEIRMNEGDQWEGDVVTFMAPNKTGWLSKQNHGGMTRWKRHWFVLSEHVLYYFEAPG--SERPRFILPMDDVRVGRGKDARVLNILGASDARIKCTKCLDNGKMELQNFKEFTIRAANPKEREEWYEALRDELEQDPVK-KMQRLAEAKRKDEQR-------AFQNRVAQPAHNDGKDGHRLNDIHLV---ELPPPVAQGWMQKRGDKNTNWKKRYVALIDPPEELHLGVALYYFEAKQQMDRMLEIGEQTQKGQLFLEHVQKVSV 563
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: A0A7S2SQ40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ40_9STRA) HSP 1 Score: 249 bits (637), Expect = 3.150e-69 Identity = 131/305 (42.95%), Postives = 198/305 (64.92%), Query Frame = 1
Query: 1357 GTVSGMPKTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFL-STTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENPGV-FSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTTDLSIGLRSNQGYVKSVKKVENGNMQQGHHRSFVLRA 2265
G+V+ ++ KFN+ P DG+ +L++ L+ T + + ++L +GLSKRRLGEY G QEVL FL + F +LD+ALR ++ FRLPGEAQQ+DR++E F+ RY E NP FS +DT ++LAF L+MLNTD++N NI E +KM F++N++GID G D P+E L Y+RIK+ EIRM+EGD +E +V+TF+AP ++GWL K++ G + +WKRHWFVL++ VLYYF P +E PR I+P++ + + + L ++ +K K ++NG M+ + + F + A
Sbjct: 122 GSVTMAATAFKQAATKFNIKPSDGINFLVEKRLVEGTPKSVARYLHKRADGLSKRRLGEYLGNVKDFNQEVLTHFLAEYSFAETTLDDALRVLLRDFRLPGEAQQIDRILEKFSRRYFETNPQCGFSNADTVYILAFSLIMLNTDLHNPNIPEAKKMKLDGFLRNNKGIDDGKDVPEETLCIYYQRIKDDEIRMNEGDQWEGDVVTFMAPNKTGWLSKQNHGGMTRWKRHWFVLSEHVLYYFEAPG--SERPRFILPMDDVRVGRGKDARVLNILGASDARIKCTKCLDNGKMELQNFKEFTILA 424
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: W7TR99_9STRA (Cytohesin 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR99_9STRA) HSP 1 Score: 239 bits (609), Expect = 2.970e-63 Identity = 138/320 (43.12%), Postives = 197/320 (61.56%), Query Frame = 1
Query: 1387 ERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLSTTE-GLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQE--ENPGVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVG--KWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTTDLSIGLRSNQG-YVKSVKKVENGNMQ-QGHHRSFVLRAESTAERDIWVDALRAEVPAF 2325
E+G+ KFN G+ +LI+N ++ D+ +L+ LSK+RLGEY G +D AQEVL L+ F+ S+DEA+R + R+PGEAQ +DR++ AFA R+ E N ++ DT ++L+F +M+LNTD++NRN+ EKM +F++N+RGI+ G D P ELL +Y IK E+RM EGDM+ESE +TFVAP+ SGWL+K+ G +G ++ R WFVL + L+YF +P +N PRCII LE + G + I L SN G +KSVK + +G H F+ R S ERD WV+A + E F
Sbjct: 120 EQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRN--PRCIIILEAVMAIK-GASSTEIILYSNGGGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTETEPF 436
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: A0A7S2GSA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GSA2_9STRA) HSP 1 Score: 239 bits (609), Expect = 5.570e-63 Identity = 155/462 (33.55%), Postives = 251/462 (54.33%), Query Frame = 1
Query: 1387 ERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLST-TEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARY---QEENPGVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTTDLSIGLRS-NQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEV---PAFHME----LSVSRSLSAT-------PSTSSGPTPIGTPSTSGRRSSKFSTSGRDRRRRATVDAEASGQMPQPVIRGWARTQSDQYESGGRRYIALFKNAGPDLQDNIVYFFGDAGMCDKMIGHHVSTSHGYLALSEVTRVQL 2715
++G KFN+ PKDG+ +L++ L+ D + I ++L +E LSKRRLGEY G + Q +L +L+ L F SLDEALR+M+ FRLPGEAQ +DR++E F+ Y + E G+ SD +V AF ++MLNTD++N ++++ K+T ++ N+RGI+ G+ E+ E +Y +IK++EIRM EGD +E EV+TF+APK+SGWL K + G + +W +HWFVL++ VLYY P +E PR I+P++ I + + I S + G +K KK++ G+MQ + F L+A S ER+ W DAL E+ P ++ ++ S A+ ST + + PST +D + ++ + +P P GW + + + + +RY A+ +Y+F +M+ T G + S + + +
Sbjct: 179 KQGATKFNIKPKDGIKFLVEKGLIEDDPKSISEYLHAHSEVLSKRRLGEYIGGIKEENQAILTHYLEGLDFAGLSLDEALRTMLREFRLPGEAQVIDRILEKFSQAYFIARGEACGLKD-SDAVFVFAFSIIMLNTDLHNPSVEK--KLTLDQWKNNNRGINGGDHISHEVQEDVYNKIKQNEIRMQEGDQWEGEVVTFMAPKKSGWLFKMNHGGIQRWSKHWFVLSEHVLYYLNKPN--DEHPRLILPMDNIRVGRSRSDSQVIDFVSADGGKIKCTKKLKEGSMQLQTYTDFTLKAPSPEEREEWFDALTQEINQDPVLRLQRLKSIAAKESFKASNEIDKQLKSTRAMKSVFIKPSTK-----------KDSKGKSKLIGRGPLDLPAPSAEGWMKKRGENNLNWKKRYFAIIDPEEALCLGTALYYFESKDALQRMLELGEQTQKGQVFFSAIKKTSM 624
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: A0A6P6JY08_CARAU (cytohesin-1-like isoform X2 n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6JY08_CARAU) HSP 1 Score: 228 bits (582), Expect = 5.610e-63 Identity = 128/318 (40.25%), Postives = 194/318 (61.01%), Query Frame = 1
Query: 1378 KTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLSTTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENPGVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPI-----GTTDLSIGLRSNQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEV 2316
K G KFN+DPK G+ +LI+N+L+ +T+EDI +FL EGL+K +G+Y G D +VL F++ +F + +L +ALR + FRLPGEAQ++DR+MEAFA RY + NPGVF +DT ++L+F ++MLNT ++N N+K+ K T F+ +RGI+ G D P+ELL +Y IK ++ E D + TF P R GWL K G V WKR WF+L D LYYF ++ PR IIPLE ++I + +L I +Q +K+ K +G + +G+H + + A +T E+D W+++++A +
Sbjct: 5 KQVAMGRKKFNMDPKKGIQFLIENDLVKNTSEDIARFLYKGEGLNKTAIGDYLGERDDFNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNPGVFQSTDTCYILSFAVIMLNTSLHNPNVKD--KPTVERFISMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDDGNDL-THTFFNPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYF--EYTTDKEPRGIIPLENLSIREVEDKKPNCFELFIPDNKDQ-VIKACKTEADGRVVEGNHTFYRISAPTTEEKDEWMNSIKAAI 316
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: A0A4W3HVE6_CALMI (Uncharacterized protein n=9 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3HVE6_CALMI) HSP 1 Score: 229 bits (585), Expect = 7.550e-63 Identity = 137/335 (40.90%), Postives = 196/335 (58.51%), Query Frame = 1
Query: 1330 SHSLSSVGMGTVSGMPKTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLSTTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENPGVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTT------DLSIGLRSNQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEV 2316
SH+LS V TV K G KFN+DPK G+ YLI+N+L+ EDI KFL EGL+K +G+Y G DP +L+ F++ +F + +L +ALR + FRLPGEAQ++DR+MEAFA RY + N VF +DT +VL+F ++MLNT ++N N+KE K T F K +RGI+ G D P+ELL +Y I+ ++ E D + TF P R GWL K G V WKR WF+L D LYYF ++ PR IIPLE + + + +L +S +K+ K +G + +G+H+S+ + A S ERD W+ ++RA +
Sbjct: 21 SHALSGVVDKTVE-RNKQMAMGKKKFNMDPKKGIEYLIENKLLCRNEEDIAKFLYKGEGLNKTAIGDYLGERDPMNIRILQSFVELQEFSDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFATRYCQCNQNVFQSTDTCYVLSFAIIMLNTSLHNPNVKE--KPTLERFNKMNRGINNGGDLPQELLRNLYESIRNEPFKIPEDDGNDL-THTFFNPDREGWLSKLG-GRVKTWKRRWFILTDNCLYYF--EYTTDKEPRGIIPLENLYVKEADDSRKSNCFELYCPNKSKGNTIKACKTDTDGRVVEGNHQSYRISAPSREERDEWIKSIRASI 348
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: Q08CQ5_DANRE (Cyth1 protein n=96 Tax=Clupeocephala TaxID=186625 RepID=Q08CQ5_DANRE) HSP 1 Score: 229 bits (584), Expect = 1.750e-62 Identity = 128/318 (40.25%), Postives = 194/318 (61.01%), Query Frame = 1
Query: 1378 KTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLSTTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENPGVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPI-----GTTDLSIGLRSNQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEV 2316
K G KFN+DPK G+ +LI+N+L+ +T+EDI +FL EGL+K +G+Y G D +VL F++ +F + +L +ALR + FRLPGEAQ++DR+MEAFA RY + NPGVF +DT ++L+F ++MLNT ++N N+K+ K T F+ +RGI+ G D P+ELL +Y IK ++ E D + TF P R GWL K G V WKR WF+L D LYYF ++ PR IIPLE ++I + +L I +Q +K+ K +G + +G+H + + A +T E+D W+++++A +
Sbjct: 66 KQVAMGRKKFNMDPKKGIQFLIENDLLKNTSEDIARFLYKGEGLNKTAIGDYLGERDDFNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNPGVFQSTDTCYILSFAIIMLNTSLHNPNVKD--KPTVERFISMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDDGNDL-THTFFNPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYF--EYTTDKEPRGIIPLENLSIREVEDKKPNCFELFIPDNKDQ-VIKACKTEADGRVVEGNHTFYRISAPTTEEKDEWMNSIKAAI 377
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Match: UPI0010FA70B0 (cytohesin-1 isoform X2 n=3 Tax=Euteleostomi TaxID=117571 RepID=UPI0010FA70B0) HSP 1 Score: 229 bits (583), Expect = 2.440e-62 Identity = 129/319 (40.44%), Postives = 194/319 (60.82%), Query Frame = 1
Query: 1378 KTTERGVNKFNVDPKDGLAYLIDNELMVDTAEDICKFLSTTEGLSKRRLGEYFGRDDPKAQEVLRLFLKKLKFKNASLDEALRSMVVRFRLPGEAQQMDRVMEAFAARYQEENPGVFSCSDTAWVLAFGLMMLNTDMYNRNIKEGEKMTEAEFVKNHRGIDQGNDPPKELLEGMYRRIKESEIRMDEGDMYESEVITFVAPKRSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFVTPQHQNEAPRCIIPLEGININPIGTT------DLSIGLRSNQGYVKSVKKVENGNMQQGHHRSFVLRAESTAERDIWVDALRAEV 2316
K G KFN+DPK G+ +LI+N+L+ +T EDI +FL EGL+K +G+Y G D +VL F++ +F + +L +ALR + FRLPGEAQ++DR+MEAFA RY + NPGVF +DT +VL+F ++MLNT ++N N+K+ K T F+ +RGI+ G D P+ELL +Y IK ++ E D + TF P R GWL K G V WKR WF+L D LYYF ++ PR IIPLE ++I + + +L I +Q +K+ K +G + +G+H + + A +T E+D W+++++A +
Sbjct: 66 KQVAMGRKKFNMDPKKGIQFLIENDLLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDEFNIKVLHSFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNPGVFQSTDTCYVLSFAIIMLNTSLHNPNVKD--KPTVERFIAMNRGINDGGDLPEELLRNLYESIKNEPFKIPEDDGNDL-THTFFNPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYF--EYTTDKEPRGIIPLENLSIREVDDSKKPNCFELFIPDNKDQ-VIKACKTEADGRVVEGNHTFYRISAPTTEEKDEWINSIKAAI 378 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig897.23.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig897.23.3 >prot_P-littoralis_Contig897.23.3 ID=prot_P-littoralis_Contig897.23.3|Name=mRNA_P-littoralis_Contig897.23.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1129bp MGMGRIICPFLVSKRTPVVSAPPLSHGLTGRTPGQGRRQQFLFEKARRRVback to top mRNA from alignment at P-littoralis_Contig897:87604..102889- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig897.23.3 ID=mRNA_P-littoralis_Contig897.23.3|Name=mRNA_P-littoralis_Contig897.23.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=15286bp|location=Sequence derived from alignment at P-littoralis_Contig897:87604..102889- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig897:87604..102889- >mRNA_P-littoralis_Contig897.23.3 ID=mRNA_P-littoralis_Contig897.23.3|Name=mRNA_P-littoralis_Contig897.23.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3387bp|location=Sequence derived from alignment at P-littoralis_Contig897:87604..102889- (Pylaiella littoralis U1_48)back to top |