mRNA_P-littoralis_Contig896.30.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig896.30.1
Unique NamemRNA_P-littoralis_Contig896.30.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 9.900e-132
Identity = 186/304 (61.18%), Postives = 228/304 (75.00%), Query Frame = 1
Query:    7 RSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQ 918
            R   + RERR+W  Y KPM+ DGTF+ RFRM + +F +L D LRP+LER+  MGALRNG +PVE+++ + LR+LAG S++E +DG+VIARSTAY    RVI AIN   ELDC WP   ED  D+   + +R + GVIR CVGAMDGLFVR  +P+ R    P S+YSGHKKGFGMNFQG+C+A Y IIAWTMN PG  NDRTAFK S F  +L+ LPP  +I+GDAAYPASD+VLVPYPGT+L    DA+NF+QSQ RISIEQ FGIMV+TWGILWRP++  L RV  V+ +VVRLHNF R R+
Sbjct:   42 RDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRR 344          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 9.470e-129
Identity = 183/305 (60.00%), Postives = 228/305 (74.75%), Query Frame = 1
Query:    4 HRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQ 918
            HR   + RERR++  Y++PM+ D TF+ RFRM + DF  L D LRP+L+RD  MGALRNGA+PVE+++ +TLR+LAG S++E +D +VIA+STAY    RVI AIN   +L+CKWP   +D   +A  + +R + GVIR+CVGAMDGLFVR I P  +  A P S+YSGHKK FGMNFQGIC+A Y II WTMN PG QNDRTAFK SGF+ LL  +PPD FI+GDAAYPAS+RVLVP PGT L    DA+NF+QSQ RISIEQ FGI+V+TW ILW+P+   L RV  V+ A+VRLHNF R R+
Sbjct:   45 HRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRR 348          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 367 bits (943), Expect = 4.170e-123
Identity = 171/268 (63.81%), Postives = 210/268 (78.36%), Query Frame = 1
Query:  118 ILVDHLRPELERDTTMGALRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 921
            +LVDHLRP L+++  MG LRNGA+PVE +V +TLRWLAG S+YE +DGHVIARSTAY     VI A+N C EL+CKWP   ED A  A  F  R S+ V+RKCVGA DGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +CDA+YRI+AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+VR WGILWRPME  + +   VV AVVRLHNFCRDR+V
Sbjct:   72 VLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKV 338          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 2.390e-112
Identity = 170/307 (55.37%), Postives = 213/307 (69.38%), Query Frame = 1
Query:    1 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 921
            ++RSTL+ RERR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++   G LRNGA+PVEY+V +TLRWLAG S+YE +DGHVIARSTAY     VI A+N C EL+CKWP   ED+ +  +       + V+RKCVGAMDGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +C                QNDRTAF FSGF++LL  LP  +F++G+AAY AS+RV+VP+PGT+ P                 EQT+GI+VR WGILWRPME  + +   VV AVVRLHNFC DR+V
Sbjct:   44 RNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCS---------------QNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKV 317          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 5.690e-90
Identity = 133/226 (58.85%), Postives = 161/226 (71.24%), Query Frame = 1
Query:  232 GASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCR 909
            G S++E +DG V A+STAY   +RVI AIN   E DC WP   +D  D+   + +R +  VI  CVGAMDGLFV    P+ R    P  +YSGHKKGFGMNFQ +C+A Y+I AWTMN PG  NDRTAFK SGFE++L+ LP   +I+GD AYPASD+VLVPYPGT L    D++NF+QSQ RI IEQ FG MV+TWGILWRP++  LGRV  V+ AVVRLHNF R
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEG-DDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLR 275          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.470e-83
Identity = 137/292 (46.92%), Postives = 177/292 (60.62%), Query Frame = 1
Query:    1 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVV 876
            ++RSTL+ RERR +  +IKP+L D TF  RFRM + DF++L+DHLRP L ++  MG LR GA+PVEY++ +TLRWLAG S+YE +DGHVIARSTAY     VI A+N C EL+CKWP    DV               +RKCVGAMDGLFVR I+P+ ++ AEPN YY+GH+KG                                                 ++GDAAY AS+RV+VP+PGT+L    DA N + SQ R++IEQT+GI+VR WGILWRPME  + +   VV
Sbjct:   44 RNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV 272          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 1.530e-79
Identity = 112/172 (65.12%), Postives = 141/172 (81.98%), Query Frame = 1
Query:  406 VGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 921
            V V+RKCVGAMDGLFVR I+P+ ++ AEPN YY+GHK GFGMNFQ +CDA+YRI+AWTM+ PG QNDRTAF F+ F++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+VR WGILWRPME  + +   VV AVVRLHNFCRDR+V
Sbjct:   15 VDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKV 186          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 4.040e-76
Identity = 136/307 (44.30%), Postives = 170/307 (55.37%), Query Frame = 1
Query:    1 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 921
            + RSTL+ R RR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++  MG LRNGA+PVEY+V +TLRWLAG S YE +DGHVIARSTAY                                                                                     +CDA+YRI+AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+V   G+    +E        VV AVVRLHNFCRDR+V
Sbjct:   44 RSRSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHA-----------------------------------------------------------------------------------VCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKV 260          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 5.630e-67
Identity = 120/301 (39.87%), Postives = 173/301 (57.48%), Query Frame = 1
Query:   28 ERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALR--NGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELDCKW-PATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 921
            +R  W  +   +     FK  +RM    F+ L + L P L  +     LR  NGA+ V+  + + LR LAGAS  +      +   T Y T + VI AIN   E+   + P T  D    AA F+++ + G+   CV  +DGLFV+T+ P+ +DTA   +YYSG K  +G+N Q +C A+YR  + +  +PG  ND  A+  S   + +  LP  +++LGDAAYP S+++L PYPG NLP   D+FNF  SQ R+ IEQ+FGI+V TWGILWRP++       +++ A+ RLHNF RD QV
Sbjct:   66 QRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQV 366          
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 2.430e-62
Identity = 115/310 (37.10%), Postives = 171/310 (55.16%), Query Frame = 1
Query:    1 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGA--LRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAFRVIKAINDCTELD-CKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 921
            K R+ +    R  W  +   +      +  +RM    F  L   L P L+          R GAV  +  + + LR +AGAS  +      +++ TA+   ++V+ AIN   E+    +P + ++   +AA +E++ + G  +  V A DGLFV+T+ PT  +T    SYYSG K G+G+N Q  CDA YR  + +  +PG  ND TA+  S     +++LPP +++LGDAAYP SD +L PYPG  LP   DAFNF+ SQ R+ IEQ FGI+V  WGILW+P+        +++ A+ RLHNF RD +V
Sbjct:   64 KTRAAIHEPRRLVWEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNFLRDEKV 373          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig896.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3F2_9PHAE9.900e-13261.18DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE9.470e-12960.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6B6_9PHAE4.170e-12363.81DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE2.390e-11255.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCG0_9PHAE5.690e-9058.85DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE1.470e-8346.92DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE1.530e-7965.12DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5K540_9PHAE4.040e-7644.30DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE5.630e-6739.87DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JV75_9PHAE2.430e-6237.10DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig896contigP-littoralis_Contig896:68017..69898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size921
Max annot lvl4776|Peronosporales
Hectar predicted targeting categorymitochondrion
Exons3
Evalue9.21e-46
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size921
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791784.62101-CDS-P-littoralis_Contig896:68016..685561680791784.62101-CDS-P-littoralis_Contig896:68016..68556Pylaiella littoralis U1_48CDSP-littoralis_Contig896 68017..68556 +
1680791784.6405475-CDS-P-littoralis_Contig896:68967..692371680791784.6405475-CDS-P-littoralis_Contig896:68967..69237Pylaiella littoralis U1_48CDSP-littoralis_Contig896 68968..69237 +
1680791784.6538253-CDS-P-littoralis_Contig896:69787..698981680791784.6538253-CDS-P-littoralis_Contig896:69787..69898Pylaiella littoralis U1_48CDSP-littoralis_Contig896 69788..69898 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig896.30.1prot_P-littoralis_Contig896.30.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig896 68017..69898 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig896.30.1

>prot_P-littoralis_Contig896.30.1 ID=prot_P-littoralis_Contig896.30.1|Name=mRNA_P-littoralis_Contig896.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=307bp
KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELE
RDTTMGALRNGAVPVEYEVGLTLRWLAGASMYEGIDGHVIARSTAYQTAF
RVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRKCVGAMDGLF
VRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQ
NDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHD
AFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHN
FCRDRQV
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mRNA from alignment at P-littoralis_Contig896:68017..69898+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig896.30.1 ID=mRNA_P-littoralis_Contig896.30.1|Name=mRNA_P-littoralis_Contig896.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1882bp|location=Sequence derived from alignment at P-littoralis_Contig896:68017..69898+ (Pylaiella littoralis U1_48)
AAGCACCGCAGCACCCTGTTGCTGCGAGAAAGGCGAGCGTGGCCTCTTTA CATCAAGCCCATGCTAGGAGACGGGACCTTCAAGGGGCGCTTCCGCATGC ACCATGTCGACTTCAAGATCCTGGTTGATCATCTTCGGCCGGAGCTGGAG AGAGACACTACGATGGGAGCCCTCCGGAACGGCGCCGTTCCGGTCGAGTA TGAGGTCGGTTTGACCCTGCGCTGGTTGGCTGGTGCGTCCATGTACGAAG GCATCGACGGGCATGTCATCGCTAGGAGTACCGCATACCAGACAGCGTTT CGCGTTATCAAGGCCATCAACGACTGTACTGAGCTGGACTGCAAGTGGCC CGCCACGCCGGAGGACGTCGCCGACAAGGCCGCTCACTTCGAAAAACGCT GCTCAGTCGGTGTTATCCGAAAATGCGTCGGGGCCATGGACGGGCTCTTT GTCCGCACCATCAGACCGACCACCAGAGATACAGCCGAACCGAACAGCTA CTACAGCGGTCACAAGAAGGGATTCGGCATGAACTTTCAGGTACACACTA CGAAATCTGAAGTAGAAGGGCGTCTTCTGTTTTCATGTACCCACCTCTCT CTCTCTCTCTCTACAATAAATATGGCATTGATCTCATAAAAACATAGGGA TCCGTATTTGATGCTCTGGTGCACTCTGCTAGTACAGCAGTACATTTACG TATGCACTAATATACTGCTGTAATGTGCATGACACACCTTAACAACTACA ACTGCTGCAGCCCCTTCCGAATACGGACATGCCGCCTGACAAAAGAGAAC ATGCATGTATGACAAAATTTGCAAATGCGGTGATAAGGCCATGTGGTAAC CGCGGATGGCTGAAGTGCACATCGATCCGCTGTCCTACTCGATGTGAGTA TGTGTCCCAAAACTGAACTGTTCGCGAACTCTTGCCCTCTCACTTATACA GGGGATCTGCGACGCGGAGTACAGGATCATCGCATGGACCATGAACAGTC CCGGGTGCCAAAATGACCGCACGGCCTTCAAGTTTTCCGGGTTCGAACAG CTCCTCCAGGACTTGCCCCCGGACTACTTCATCCTGGGCGACGCGGCGTA CCCCGCTTCCGACCGCGTCCTGGTCCCGTACCCCGGGACAAACCTGCCAA CGTTCCACGACGCCTTCAACTTCTGGCAGTCTCAGGGGCGGATCTCCATC GAGCAGACCTTCGGCATAATGGTGAGTGCTCAACGCTTCAGCTGCTGGAC TTCCAAATGACGACCATTCGGGGACACCTATTTTGTGTAGCTGAGCTTGT TTGTGTGCGATCTCGAGGTATCTTGCGTGTCGACGATTTCGCCCATTTCT ATTTGATTTTCCCGCCGCGCGCGGTCCAGCACTGGTTGTCAGCTAAAGTA CAAGTTTTTGTCGTGGGCTGCTGCGATTCAAAAAATTTTACTGTTTGAAA GTCATGCGGGTAGCCTTGGTCCCCGCTTGCTGGTGGTCCTCACTGCTGCT GTGCTGTTTCGGGGAGATGAGGACAGCTCCCAGTGTAGGAACAAGTCGCA ATTTTGTTCGAGCGGCAGGGTAAGCGAGACACGTGTTTTATTTTTTAGAG CTGTGCGATTGGGGTCGATCACAGCTGTGAGCACACACTTTCGACGAGCA AACTTCGCGATTTTCTCTTTTGTCTGCTTATTTCAATTGTCTCTTTTCCT GCCAAGTAGTCGGAGACCATCCAACACCCACACCCGACGCCGTTCTTTCC CTGTGCTTGATATTTAAAAAGGTCCGGACGTGGGGAATCCTTTGGCGCCC CATGGAGTTTGGGCTGGGGCGGGTTGTTGAAGTGGTGGGGGCCGTCGTTC GCCTGCACAACTTCTGCAGGGATCGGCAGGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig896:68017..69898+

>mRNA_P-littoralis_Contig896.30.1 ID=mRNA_P-littoralis_Contig896.30.1|Name=mRNA_P-littoralis_Contig896.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=921bp|location=Sequence derived from alignment at P-littoralis_Contig896:68017..69898+ (Pylaiella littoralis U1_48)
AAGCACCGCAGCACCCTGTTGCTGCGAGAAAGGCGAGCGTGGCCTCTTTA
CATCAAGCCCATGCTAGGAGACGGGACCTTCAAGGGGCGCTTCCGCATGC
ACCATGTCGACTTCAAGATCCTGGTTGATCATCTTCGGCCGGAGCTGGAG
AGAGACACTACGATGGGAGCCCTCCGGAACGGCGCCGTTCCGGTCGAGTA
TGAGGTCGGTTTGACCCTGCGCTGGTTGGCTGGTGCGTCCATGTACGAAG
GCATCGACGGGCATGTCATCGCTAGGAGTACCGCATACCAGACAGCGTTT
CGCGTTATCAAGGCCATCAACGACTGTACTGAGCTGGACTGCAAGTGGCC
CGCCACGCCGGAGGACGTCGCCGACAAGGCCGCTCACTTCGAAAAACGCT
GCTCAGTCGGTGTTATCCGAAAATGCGTCGGGGCCATGGACGGGCTCTTT
GTCCGCACCATCAGACCGACCACCAGAGATACAGCCGAACCGAACAGCTA
CTACAGCGGTCACAAGAAGGGATTCGGCATGAACTTTCAGGGGATCTGCG
ACGCGGAGTACAGGATCATCGCATGGACCATGAACAGTCCCGGGTGCCAA
AATGACCGCACGGCCTTCAAGTTTTCCGGGTTCGAACAGCTCCTCCAGGA
CTTGCCCCCGGACTACTTCATCCTGGGCGACGCGGCGTACCCCGCTTCCG
ACCGCGTCCTGGTCCCGTACCCCGGGACAAACCTGCCAACGTTCCACGAC
GCCTTCAACTTCTGGCAGTCTCAGGGGCGGATCTCCATCGAGCAGACCTT
CGGCATAATGGTCCGGACGTGGGGAATCCTTTGGCGCCCCATGGAGTTTG
GGCTGGGGCGGGTTGTTGAAGTGGTGGGGGCCGTCGTTCGCCTGCACAAC
TTCTGCAGGGATCGGCAGGTG
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