mRNA_P-littoralis_Contig896.22.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5JXX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX9_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.280e-57 Identity = 86/157 (54.78%), Postives = 111/157 (70.70%), Query Frame = 3
Query: 222 ELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEACGALWPGGDEMPACV 692
++PTPD +GY GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H P + M+LA KKAAA HPGLCGVHHA +IA V+T+DV + G T ANK+RNQAC+DG +A+N RG GVQL RA CF AC A+WPG +EM A V
Sbjct: 2 DMPTPDVEGYKAGNTMACHGQRVSLIAANTPAEEGTSTLLRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVHHAHIIAAVRTEDVTSRSGFTAANKFRNQACYDGGMAMNTRGKGVQLKRADCFTHACRAVWPGNEEMEASV 158
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5KUP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP8_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.440e-54 Identity = 83/152 (54.61%), Postives = 110/152 (72.37%), Query Frame = 3
Query: 225 LPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEACGALWPGGDEM 680
+PTPD +G GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H P + M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQAC+DGA+A+NARG GVQL RA+CF A A+WPG +EM
Sbjct: 1 MPTPDVEGCKAGNTMACHEQMVSLIAANTPAEEDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHARRAVWPGNEEM 152
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5JH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH50_9PHAE) HSP 1 Score: 185 bits (470), Expect = 7.390e-53 Identity = 85/128 (66.41%), Postives = 101/128 (78.91%), Query Frame = 3
Query: 321 DSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEACGALWPGGDEMPACVIEVF 704
+ +D+ RAFAFE+AS+VG RYC HV P LEDMS AK+KKAAA+HPGLCGV+HA +IA V+TQDV +KW TT NKYRNQAC++GA A+NARGAGVQLPRA+CF AC AL PG EM V+E F
Sbjct: 104 EENTDVGRAFAFEVASKVGARYCSHVSAPEPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQACYNGAEAVNARGAGVQLPRAECFTRACRALLPGSGEMDPLVVEAF 231
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5K6B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B0_9PHAE) HSP 1 Score: 180 bits (457), Expect = 4.260e-51 Identity = 80/152 (52.63%), Postives = 108/152 (71.05%), Query Frame = 3
Query: 225 LPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEACGALWPGGDEM 680
+P P+ +G GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H P + M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQAC+DGA+A+NA G GVQL RA+CF A A+WPG +EM
Sbjct: 70 MPPPNVEGCKAGNTMACHEQMVSLIAANTPAEEDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSQSGSTAANKFRNQACYDGAMAMNAHGKGVQLKRAECFTHARRAVWPGNEEM 221
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5KH61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH61_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.760e-40 Identity = 69/117 (58.97%), Postives = 89/117 (76.07%), Query Frame = 3
Query: 216 MAELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 566
M +LPTPD + YVGGN QAC+ Q ++ + A + ++ +D+ RAFAFE+ S+VG RYC H+ P LEDMS AK+KKAAA+HPGLCGV+HA +IA V+TQDV +KW TT NKYRNQ
Sbjct: 1 MEDLPTPDIEAYVGGNQQACYVQLVDVLSALPAGEEN-TDVGRAFAFEVPSKVGARYCSHLSAPEPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQ 116
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5KQB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB2_9PHAE) HSP 1 Score: 135 bits (340), Expect = 1.560e-34 Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 3
Query: 222 ELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEEPPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGV 614
ELP PD + Y GN++ S + ++L RAFAFEIA+ VGG YC H+ EP + M+ + K AAA HPGLCGV+HA ++A VKTQDV + G+T NKYRNQAC DGA+ +NARG G
Sbjct: 2 ELPAPDVEAYKAGNTRPATIMVSLIANNPPSEDGTNNNLARAFAFEIAAAVGGEYCDHLTEPEPMPSMAPSAAKVAAAEHPGLCGVYHAHILAAVKTQDVQARSGSTAGNKYRNQACCDGAITMNARGRGA 132
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5JAI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAI4_9PHAE) HSP 1 Score: 131 bits (330), Expect = 5.730e-34 Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 3
Query: 414 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEACGALWPGGDEMPACVIEV 701
+ M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQAC+DGA+A+NARG GVQL RA+CF A A+WPG +EM A V+E
Sbjct: 1 MPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHAGRAVWPGNEEMEASVVEA 96
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5K6T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T9_9PHAE) HSP 1 Score: 128 bits (322), Expect = 6.660e-33 Identity = 59/98 (60.20%), Postives = 70/98 (71.43%), Query Frame = 3
Query: 414 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEACGALWPGGDEMPACVIEVFS 707
+ M A K AAA HPGLCGV+HA +IA VK QDV+ + G+T ANKYRNQAC+DG +A+NARG GVQL R +CF C ALWPG E A V+E FS
Sbjct: 1 MPSMKAAAAKVAAAEHPGLCGVYHAHIIAAVKIQDVLARSGSTAANKYRNQACYDGEMAMNARGQGVQLKREECFTHPCRALWPGSGESDASVVEAFS 98
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5KGD0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGD0_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 8.410e-21 Identity = 50/116 (43.10%), Postives = 66/116 (56.90%), Query Frame = 3
Query: 363 ASQVGGRYCRHVEEPPALEDMS-LAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDK--WGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEACGALWPGGDEMPACVIEV 701
A VG RYC H P L D+S L +++ A H GLCG +HA IA + V ++ T + RNQAC+D ALNARG GVQL R +CF +AC A+WP +PA + +
Sbjct: 50 AVAVGARYCNHDTPPGPLPDISKLPERQAAVQQHAGLCGKYHAEHIANIDVTRVEERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACCAVWPDDQPLPAAKLAI 165
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Match: A0A6H5KUN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUN4_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 3.100e-10 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 3
Query: 414 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 566
+ M +A K AAA HPGLCGV+HA +IA VK+QDV+ + G+T ANKYRNQ
Sbjct: 1 MPSMKVAAAKVAAAEHPGLCGVYHAHIIAVVKSQDVLARSGSTAANKYRNQ 51 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig896.22.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig896.22.2 >prot_P-littoralis_Contig896.22.2 ID=prot_P-littoralis_Contig896.22.2|Name=mRNA_P-littoralis_Contig896.22.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=166bp MAELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIAback to top mRNA from alignment at P-littoralis_Contig896:61129..63058- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig896.22.2 ID=mRNA_P-littoralis_Contig896.22.2|Name=mRNA_P-littoralis_Contig896.22.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1930bp|location=Sequence derived from alignment at P-littoralis_Contig896:61129..63058- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig896:61129..63058- >mRNA_P-littoralis_Contig896.22.2 ID=mRNA_P-littoralis_Contig896.22.2|Name=mRNA_P-littoralis_Contig896.22.2|organism=Pylaiella littoralis U1_48|type=CDS|length=498bp|location=Sequence derived from alignment at P-littoralis_Contig896:61129..63058- (Pylaiella littoralis U1_48)back to top |