mRNA_P-littoralis_Contig896.17.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig896.17.1
Unique NamemRNA_P-littoralis_Contig896.17.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 1.190e-80
Identity = 180/495 (36.36%), Postives = 214/495 (43.23%), Query Frame = 1
Query: 1717 DLFLLFYSRFFHIAPPTGKVDKKDPNYDSKHHIRKFEEALNLAWSKLADPGAWLSYDEQMVKCTSRSMFFIMRYNPKKPIKHG------------------------------------------------------------------------------------------------------------------------------------------------------------RRIAGANREVLTSMQPVVRLDYTGGMGGVDVADQRLTAHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLAQCKAVL------------AERREGGHAAGSAXXXXEQMGGGGDLTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPVYDSNGAKTVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD-RHYTAINW 2694
            +LF+LFY RFF++AP TGK++K DP YD KHHIRK E+  N  WS+L +PGAWLSYDEQMVK T+R MF +MRYN  KPIK+G                                                                                                                                                            +R A  N E ++S QP+ R +Y   MGGVDVADQRL +HAH H+PMT+FWRRVFDQK  QA+SN +LLF  WA VL+ QC A L             E  EGG AA S            DLTVAEL E    L + +K ERVDWD RLA  LM+ C VGH   G RR  K    Y  NGA + +VC G  C     P + Y   RTRG CWC IC+NGLGK RA+ LC +C    + HVAA   A  R Y  I+W
Sbjct:    8 NLFVLFYGRFFNLAPATGKLNKDDPQYDCKHHIRKLEDVFNKCWSELVEPGAWLSYDEQMVKSTARVMFALMRYNKAKPIKNGIKCWAICCPSGYCFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDNFFTGAPLLRCLATRDIFAVGTLRGNRIGVELANYLWAKEGMAATERGQMLTARSDELVIVKWIDSQEVYLMSTKHVFADEWEPLAYEKRAANNNGEKVSSRQPLARKEYVKNMGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSNGWLLFYEWAGVLVTQCTAALEAATQDGGMGDAGEAEEGGVAADSC-----------DLTVAELREFQTLLKKAMKMERVDWDRRLANHLMSLCNVGHTENGARRATKPSESYLVNGACSSRVCHGRGCKT--PPGSPYAGTRTRGACWCDICTNGLGKDRALILCTKCHKVPEAHVAAREWATGRKYKPISW 489          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5JHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH7_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 1.240e-71
Identity = 152/347 (43.80%), Postives = 184/347 (53.03%), Query Frame = 1
Query: 1810 HIRKFEEALNLAWSKLADPGAWLSYDEQMVKCTSRSMFFIMRYNPKKPIKHGRRI-------------------------------------------AGANREVLTSMQPVVRLDYTGGMGGVDVADQRLTAHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLAQCKAVLAERREGGHAAGSAXXXXEQMGGGG-------DLTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPVYDSNGAKTVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD-RHYTAINWA 2697
            H  + E+ LN  WS+L DPGA LS+DEQMVK T+R MF +MR+N  KPIK G +                                            A  N E ++S QP+ R +Y   MGGVDVADQRL AHA  H+PMT+FWRRVF QK  QA+SNA+LLF  WA VL  QC   L    + G      XXXX              DLTVAEL E  + + + +K ERVDWD RLA  LM+ C VGH   G RRT K V +Y   GAK+  VC GG C +    + RYK  RTRGVCWC  C++G GK RA+ LC +C      HV A   A  R Y  I+W+
Sbjct:  202 HNGELEDVLNKCWSELVDPGACLSHDEQMVKSTARVMFMLMRFNKSKPIKLGIKCWAICCPSGYCFVQSIDGGFSGDIKLKPYATCPVGKSARTVVKRAADNGEKVSSSQPLARKEYVKNMGGVDVADQRLGAHARTHRPMTFFWRRVFAQKFSQAVSNAWLLFYEWAGVLAKQCTVALDAATQDGEVGDXXXXXXXXXXXXXXAAADSCDLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVGHTETGARRTAKPVEMYSVKGAKSSLVCYGGHCEETAKASRRYKGSRTRGVCWCDTCTDGSGKDRALILCTKCNKVPAAHVTARKHAAARKYKPISWS 548          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5KNU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU4_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 2.010e-71
Identity = 157/367 (42.78%), Postives = 192/367 (52.32%), Query Frame = 2
Query:  728 PLPVSPATDVEFCRGIISRGPKKGTPCGKRAGGRVVGLCKHHDGEQQRRRTPAAQGGAXXXXXXXXXXXXXXAAGGDDESNYGSDEEVGGGVDECDTRGAATKVEKKTRCTLQLYRKASKIEDPKFREAYEKVWHLKNHDQKPKKGQPPPPLGPHDPKGWVTDGLPVDETSPAFLRKNKHKGGRKFSHTSDLLERLPKVNRQGLQAVRDFVGGKGPYLPFQFFEECFPREAQDIVLQETNSYANFCAETTNPSPLQEVRHKKKKWMKGFQGIPTTENKDKKNVADFQRHHLYGVIGILVTGGLTQKRRFTNHWGYHRTTTTAGYENACLVTCSSSSILASSTSRPRQARLTRRTPTTTPSITSGSSR 1828
            P PV    D   CR II RG  KG  CGK AGGRV+GLC HHDG ++R +                       AG DD++N+GSD+E+   VDE  T GA  +  K        Y++AS IED  FREAYE VWHLK      K+ +                            R +KH GG KF     L+ RLPK+NR  L  +R+F+ GK   LPF+FFEE FP   QDI+L +TN Y NFCAE TNPSPLQ+ RH+KKK   G     + +  D   V  F R H+YGV+GIL++ G+TQKRR T+HWG          E+ACL T S SS   SST         RR  +T PSITSG  R
Sbjct:   67 PSPVG--ADPSVCRAIIERGQNKGKRCGKAAGGRVLGLCGHHDGTRKRLKAAGTTAAGTTAAAGLEV-----GAGVDDQANFGSDDELXXXVDELQTAGADAQQSK---LQHSHYQRASVIEDQGFREAYESVWHLKKKATSKKRKK----------------------------RMHKHTGGDKFQLAPSLIARLPKLNRTDLNVLRNFIDGKDKSLPFKFFEEAFPPACQDIILTKTNKYVNFCAEETNPSPLQQPRHRKKKTRTGLSYGSSEDRPDGSKVYGFHRKHVYGVMGILISAGITQKRRLTDHWGVGDHDNYRMSESACLATSSRSSTAGSSTWLQSSRLSPRRIQSTIPSITSGRVR 395          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5K5P5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P5_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 3.900e-70
Identity = 128/243 (52.67%), Postives = 160/243 (65.84%), Query Frame = 2
Query:  947 AGGDDESNYGSDEEVGGGVDECDTRGAATKVEKKTRCTLQLYRKASKIEDPKFREAYEKVWHLKNHD--QKPKKGQPPPPLGPHDPKGWVTDGLPVDETSPAFLRKNKHKGGRKFSHTSDLLERLPKVNRQGLQAVRDFVGGKGPYLPFQFFEECFPREAQDIVLQETNSYANFCAETTNPSPLQEVRHKKKKWMKGFQGIPTTENKDKKNVADFQRHHLYGVIGILVTGGLTQKRRFTNHWG 1669
            AG DD++N+GSD+E+GGGVDE  T GA  +  K        Y++AS IED  FREAYE VWHLK     +K K G  PP   PHD +GW + G+  D  S A+ R++KH GG KF  T  L+ RLPK NR GL  +R+F+ GK   LPF+FFEE FP   QD++L ETN Y NFCAE TNPSPLQ+ RH+KKK   G   +P+ +  D   V  F R HLYGV+GIL++ G+TQKRR T+HWG
Sbjct:   55 AGVDDQANFGSDDELGGGVDELQTAGADAQQSK---LQHSHYQRASVIEDQGFREAYESVWHLKKKSTSKKRKAGDAPPQPAPHDERGWTSAGMKKDVESEAYKRRHKHTGGDKFQLTPSLIARLPKPNRTGLNVLRNFIDGKDKSLPFKFFEEAFPPACQDMILTETNKYVNFCAEETNPSPLQQPRHRKKKTRTGLPYVPSEDRPDGSKVYGFHRKHLYGVMGILISAGITQKRRLTDHWG 294          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5JT54_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT54_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.280e-56
Identity = 128/330 (38.79%), Postives = 155/330 (46.97%), Query Frame = 1
Query: 1666 GVSPDHDYSRVRECMPRDLFLLFYSRFFHIAPPTGKVDKKDPNYDSKHHIRKFEEALNLAWSKLADPGAWLSYDEQMVKCTSRSMFFIMRYNPKKPIKHGRRIAGANREVLTSMQPVVRLDYTGGMGGVDVADQRLTAHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLAQCKAVLAERREGGHAAGSAXXXXEQMGGGGDLTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPVYDSNGAKTVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAA 2655
            GV    +Y  VR CMPRDLF+LFY RFFH+APP GK+ K DP YDSKHHIR+ E+ LN  WSKL +PGAWLS+DEQMVK T+R+MF +M                                          ++        V +   ++  RV          +A                    E  EG  AAGS            DLTVAEL+E    + +  K ER+DWD RLA  LM+ C VG   KG RRT   V  Y   GA+  +VC GG C K      RY   RT GVCWC  C+ G GK R + LC  C    + HVAA
Sbjct:   38 GVEAHDNYPLVRACMPRDLFILFYGRFFHLAPPNGKLKKDDPQYDSKHHIRELEDVLNECWSKLVEPGAWLSHDEQMVKSTARAMFALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSNILQFTFVGVQR---HYAARVGXXXXXXXAGDA-------------------GEAGEGEAAAGSC-----------DLTVAELQEFQCLVEKATKMERIDWDCRLANHLMSLCNVGDGGKGARRTTT-VESYRVKGARGQRVCHGGACKK---TAGRYTGTRTCGVCWCDTCTGGTGKDRTLMLCNTCSKIPEAHVAA 330          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5JER6_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER6_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 3.330e-56
Identity = 132/347 (38.04%), Postives = 179/347 (51.59%), Query Frame = 1
Query: 1681 HD-YSRVRECMPRDLFLLFYSRFFHIAPPTGKV-----DKKDPNYDSKHHIRKFEEALNLAWSKLADPGAWLSYDEQMVKCTSRSMFFIMRYNPKKPIKHGR-----------RIAGANREVLTSMQPVVRLDYTGGMGGVDVADQRLTAHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLAQCKAVLAERREGGHAAGSAXXXXEQMGGGGDLTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEV----PVYDSNGAKTVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAA 2658
            HD Y  V++CM RD+F L Y RF H + P          +++P+YDSK HIR+ EE LN AW+   +   WLSYDEQM+K  S+    +  Y P KPIKHG            R  G N E L   QP  R+DY   M GVD+ADQ+  +H H HK  T FWRRV+D KL+QA++NA+L+F  W E+L+ + +                    + +  GG+L   ELE  S  LA + K ER  WD ++A +LMAKC V   NKGGRR   +     PV+ S   K+ ++C   TC          K++ T+G      C+ G      V +C+ C  S + H  AA
Sbjct:  157 HDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGGIDHFKPLPLSLRAKGRNGEPLDLQQPWTRMDYFLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWVELLIREVEP------------------KKPITPGGELE--ELELASTELATLSKVERAVWDEQMATLLMAKCNVARPNKGGRRPASDNKPADPVWGSVTLKSGRLCLNPTC----------KTRSTKGCSCKQFCTRG--DKSGVLMCETCWKSPESHEQAA 471          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5K972_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K972_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 2.060e-51
Identity = 108/259 (41.70%), Postives = 130/259 (50.19%), Query Frame = 1
Query: 1678 DHD-YSRVRECMPRDLFLLFYSRFFHIAPPTGKVDKKDPNYDSKHHIRKFEEALNLAWSKLADPGAWLSYDEQMVKCTSRSMFFIMRYNPKKPIKHG------------------------------------------------------------------------------RRIAGANREVLTSMQPVVRLDYTGGMGGVDVADQRLTAHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLAQCKAVL 2217
            DHD Y  VR+CMPRDLF  FY RFF++ P    + K  P YDSKHHIR FE+ALN  WS L +   W+SYDEQMVK T+R+M  +MR+NP+KPIKHG                                                                              +R A  +   ++S+QP+ RLDY   MGGVDVADQRL  H H HK  T+FWRRVFDQK  QAISNAYLL+  WA +L  QC A +
Sbjct:  121 DHDNYPPVRKCMPRDLFTFFYCRFFYMTPVIEALSKTHPEYDSKHHIRAFEDALNTCWSSLVELEGWVSYDEQMVKSTARAMHGLMRFNPQKPIKHGIMGFPRHFCRGYAARQALGFGRRDGALAEQRGIHQREGRHVFARSNHIVIIEWVDSKTVHLMSTKHVFDEDWNPVLQTKRAALNDGNSVSSLQPLARLDYVVRMGGVDVADQRLMTHQHGHKQKTFFWRRVFDQKFAQAISNAYLLYAAWAGILTTQCAAAV 379          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5JWA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA2_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.980e-46
Identity = 112/255 (43.92%), Postives = 129/255 (50.59%), Query Frame = 1
Query: 2077 AHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLAQCKAVLAERR----------------------------------EGGHAA-------GSAXXXXEQMGGGGDLTVA-----ELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPVYDSNGAKTVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEAD--RHYTAINWA 2697
            AH H HKP T+FWRRVFDQ L QAISNAYLL+  WA +   QC A L                                      EGG             XXXX    G G+ T A     ELEE    L + +  ERV WD RL+  LMAKC VG  N GGRR    VP YDS GAK  +VC+GG+C  G+    RY+SKRT GVCWC++CS   GK RA+HLC  C+     H AAA  AD  R Y  I+WA
Sbjct:    2 AHQHHHKPKTFFWRRVFDQNLAQAISNAYLLYAAWAGIFATQCTAALEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDWEGGDEEEXXXXXXXXXXXXXXXXXGEGESTDAPLSKEELEEFGVLLKKCLAMERVTWDQRLSTHLMAKCNVGTLNSGGRRAGPVVPPYDSKGAKCARVCKGGSC--GNKTGGRYRSKRTTGVCWCNVCSGSKGKARALHLCHTCKKIPSAHGAAAEAADKKRKYKPIDWA 254          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 3.500e-42
Identity = 120/324 (37.04%), Postives = 143/324 (44.14%), Query Frame = 1
Query: 1966 RRIAGANREVLTSMQPVVRLDYTGGMGGVDVADQRLTAHAHVHKPMTYFWRRVFDQKLQQAISNAYLLFLMWAEVLLAQCKAVL-AERREGG--------------------------------------------------HAAGSAXXXX------------------EQMGGGGD---------------------LTVAELEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPVYDSNGAKTVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKMRAVHLCKQCRASTQGHVAAALEA 2667
            +R A  N E ++S QP+ R  Y   MGGVDVADQRL AHAH H+PMT+FWRRVFDQKL  A+SNA+LLF  WA VL  QC A L A  + GG                                                  HA  +A                       Q GG GD                     LTVAEL E  + + + +K ERVDWD RLA  LM+ C V H      RT K V  Y   GAK+  VC GG C +     +R    RTR VCWC  C++GLGK RA+ LC +C      +V A   A
Sbjct:  275 KRAADNNGEKVSSSQPLARKKYVKNMGGVDVADQRLGAHAHTHRPMTFFWRRVFDQKLSHAVSNAWLLFYEWAWVLATQCTAALEAATQHGGAGDXXXXXXXXXXXXXGAAADSCDLTVAELXARITPMTFFWRRVFDQKLSHAVSNAWLLFYEWAWVLATQCTAALEAATQHGGAGDXXXXXXXXXXXXXXAAADSCDLTVAELREFQSLVKKAMKVERVDWDRRLANHLMSLCSVCHTETRASRTTKPVETYSVKGAKSSLVCYGGICEE-TAKASRCTGSRTRVVCWCDTCTDGLGKDRALILCTKCNKVPAANVTARKHA 597          
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Match: A0A6H5K756_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K756_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.060e-40
Identity = 103/221 (46.61%), Postives = 125/221 (56.56%), Query Frame = 2
Query:  734 PVSPATDVEFCRGIISRGPKKGTPCGKRAGGRVVGLCKHHDGEQQRRRTPAAQGGAXXXXXXXXXXXXXXAAGGDDESNYGSDEEVGGGVDECDTRGAATKVEKKTRCTLQLYRKASKIEDPKFREAYEKVWHLKNHD-QKPKKGQPPPPLGPHDPKGWVTDGLPVDETSPAFLRKNKHKGGRKFSHTSDLLERLPKVNRQGLQAVRDFVGGKGPYLPFQF 1393
            P +PA  V F    IS G ++G  CG + G R  G CKHHDG Q+RR+T  A G A                G  +  NY S+ E+GGG+DE  T GA   + K        Y +ASKIED  FR A E VWHLK     KPK G+PPPP  P DPKGWV +GLP DE+S  + R++KH GG  FS +  L   LPKV++QGL  +R FV GKG  LPF F
Sbjct:  271 PANPAVRVAF----ISPGERRGEKCGNKVGDRTAGFCKHHDGLQKRRKT--ASGAALG------------VGGSVEAGNYDSESELGGGMDELQTPGARPFIAKSKELH---YAQASKIEDEGFRRAQESVWHLKRIKLPKPKAGEPPPPPIPDDPKGWVFEGLPRDESSNPYKRRHKHPGGDNFSLSDQLKASLPKVDKQGLAVLRSFVNGKGGGLPFMF 470          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig896.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQZ5_9PHAE1.190e-8036.36DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JHH7_9PHAE1.240e-7143.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNU4_9PHAE2.010e-7142.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5P5_9PHAE3.900e-7052.67DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JT54_9PHAE1.280e-5638.79DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
A0A6H5JER6_9PHAE3.330e-5638.04DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
A0A6H5K972_9PHAE2.060e-5141.70DDE_Tnp_1_7 domain-containing protein (Fragment) n... [more]
A0A6H5JWA2_9PHAE1.980e-4643.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDZ7_9PHAE3.500e-4237.04DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5K756_9PHAE1.060e-4046.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig896contigP-littoralis_Contig896:55601..60479 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog6500.XP_005111750.1
PFAMsDDE_Tnp_1_7
Model size2775
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons5
Evalue7.31e-05
EggNOG OGs28PUT@1|root,2QWHD@2759|Eukaryota,38EA4@33154|Opisthokonta,3BMU4@33208|Metazoa,3CZSB@33213|Bilateria
DescriptionTransposase IS4
Cds size996
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig896.17.1prot_P-littoralis_Contig896.17.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig896 58548..60407 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791784.3180292-UTR-P-littoralis_Contig896:55600..567591680791784.3180292-UTR-P-littoralis_Contig896:55600..56759Pylaiella littoralis U1_48UTRP-littoralis_Contig896 55601..56759 +
1680791784.3323798-UTR-P-littoralis_Contig896:57660..579421680791784.3323798-UTR-P-littoralis_Contig896:57660..57942Pylaiella littoralis U1_48UTRP-littoralis_Contig896 57661..57942 +
1680791784.345723-UTR-P-littoralis_Contig896:58281..585471680791784.345723-UTR-P-littoralis_Contig896:58281..58547Pylaiella littoralis U1_48UTRP-littoralis_Contig896 58282..58547 +
1680791784.3906243-UTR-P-littoralis_Contig896:60407..604791680791784.3906243-UTR-P-littoralis_Contig896:60407..60479Pylaiella littoralis U1_48UTRP-littoralis_Contig896 60408..60479 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791784.3555162-CDS-P-littoralis_Contig896:58547..586571680791784.3555162-CDS-P-littoralis_Contig896:58547..58657Pylaiella littoralis U1_48CDSP-littoralis_Contig896 58548..58657 +
1680791784.365115-CDS-P-littoralis_Contig896:59099..592451680791784.365115-CDS-P-littoralis_Contig896:59099..59245Pylaiella littoralis U1_48CDSP-littoralis_Contig896 59100..59245 +
1680791784.3806157-CDS-P-littoralis_Contig896:59667..604071680791784.3806157-CDS-P-littoralis_Contig896:59667..60407Pylaiella littoralis U1_48CDSP-littoralis_Contig896 59668..60407 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig896.17.1

>prot_P-littoralis_Contig896.17.1 ID=prot_P-littoralis_Contig896.17.1|Name=mRNA_P-littoralis_Contig896.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=332bp
MPRDLFLLFYSRFFHIAPPTGKVDKKDPNYDSKHHIRKFEEALNLAWSKL
ADPGAWLSYDEQMVKCTSRSMFFIMRYNPKKPIKHGRRIAGANREVLTSM
QPVVRLDYTGGMGGVDVADQRLTAHAHVHKPMTYFWRRVFDQKLQQAISN
AYLLFLMWAEVLLAQCKAVLAERREGGHAAGSAAGAAEQMGGGGDLTVAE
LEELSAGLARMIKTERVDWDTRLACILMAKCGVGHKNKGGRRTYKEVPVY
DSNGAKTVKVCRGGTCVKGDDPTARYKSKRTRGVCWCSICSNGLGKMRAV
HLCKQCRASTQGHVAAALEADRHYTAINWAT*
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mRNA from alignment at P-littoralis_Contig896:55601..60479+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig896.17.1 ID=mRNA_P-littoralis_Contig896.17.1|Name=mRNA_P-littoralis_Contig896.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4879bp|location=Sequence derived from alignment at P-littoralis_Contig896:55601..60479+ (Pylaiella littoralis U1_48)
TTAACCCTTCTGTAACTACCCAGTGATTTTTTTTATCACAAAAATTTATC ATCGGGATTGTATTTTTTTTTTTGGGCCAGTCTCTTCGGGTGTGAGTCGG GTGTTGCCCGGGAGGGGACGAAAACAAAATTTCCCGAACCCATGATGCAA GGAGTTCTGTGGTTCGTGGGCTTGCGGCTGCGCAACTGTGGCACCTCCAA TGCTGCCACGGAAGGTCGCTACCGAGCGTATGAAGAGCAACACCAGTCTT TCGAGGTCCGTGATCTTCATAGCGGTAGTTTTAGGAGTACTCAGTCACGC TGCATCGCTTTTGGCGGCCCGAGGGTCATTCACAGATGGGTGTTATTGGA TATTGCAACAACGCCCAGCCCTCGAGCGTCCTACATCCTGTCCTGGTCTT CAAAGCAACATGGAGCACCCCTCCACGCACAACGATCCAGTGGACGACAC GAGCGACGTCGAAGAGGAAGACGAAGAGGTTGAGTAGTGGTCGTACCGAG CGTGGAATACTGCACCTTACGCTGCTAACACACAAACCGCTGGGATAGGT ACCCAAGGGGCGGCGCTTCAGCAGCAACAGCAGCAGCAGCAGCAGGGAGC AGTGCCTGCTACCTTGCCACTCCCGCCCACCCAGCAACAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGGGAGCCGCACCTGCTACACTTTCGAACCCG CCGGCCCAGCAGCAGCAGCAGCAGCAGCCACTGCCTGTATCCCCTGCCAC GGATGTCGAGTTCTGTCGTGGCATTATATCGCGCGGCCCAAAGAAGGGCA CACCCTGCGGTAAACGAGCGGGGGGCCGTGTTGTGGGGTTGTGCAAACAT CACGATGGTGAACAGCAGCGGCGCAGGACACCCGCGGCGCAGGGAGGTGC GGCGCAGGGAGGCGCGGCGCAGGGAGGCGGGGCTCAGGCAGGCGCCGCTG GTGGAGATGACGAGAGCAACTATGGATCGGACGAGGAGGTAGGAGGAGGT GTAGACGAATGTGACACGAGAGGAGCAGCAACGAAGGTCGAGAAAAAAAC AAGGTGCACACTACAACTGTATCGGAAGGCTTCTAAAATCGAGGACCCCA AGTTCCGCGAGGCGTACGAGAAAGTGTGGCACCTCAAGAACCACGACCAA AAGCCAAAGGTAAGCTGACATGCAGCAGGAACAAGTTGGTTGTGCACGTC CATCGGTGTAGATATTACGGCAATTTGTAGACGAACAAGTTGGTAATATG CATGTGTTTCTACAGCAGTAGGGCAGCGCATGAAAGCACAACAAATCGCA GTTTGATTTTCCACGTGTATCTCGTTTGTTTTTTACTGCTGTAGGGTGAT GAACTCGTTTCTTTCTCTCTTTCTCTCTCTCTCTGCTGACCCCCTGGTGC TTTCACTTTGAACACGACGTGTAGACTGACATGACATGTACAGCAGTAAA AAATAGGATGACAACACCGACGCGCATGTGTACGTTTACAACATGTTGTG TTCATGTCGTCTGTTTCGTGTTGTGCTGTTGATCCTTATTTTTTACCGAA AGCGACACGAGGTAGTTATTATGGTATCGTATCGTATCTTATCGTCTGAT GGCACTACAAGCATCCGAAAGTAAGCCCCCCCTCCCCCTCTCTCTGTAGC AAGGAAAAAGAAGGACAAAACTAGTGTTGGCTCCGTAGATGTCGGTGGTA ACGCCGCGGGTCGAGGAAATATTCGCAGTAGTGCATCATGTCTATTCCCC GGGCGACCGTGGGAGGTCGGAGGTGGTTGGTTGCGTAGAAAAAAAACGGC GCCCAAACAGCACCGCTGTCTGTGGACGGGGTTGGGGGGGTATCGCCAGA GGACATGACGTTGTATGGGTATGGTACGTTTAACAACAAGCAATGGGAGC GAAACATGGTTAAATTTAGCACAGCCAAGTATATGTTGGCATACGTGCCA TTTCGCTTTTTTCGTTGAAAACACCACAAACAGGTGTATAACTCGTGAAC TTCTCTGACGCGATTATTTTGCATGCCCTGTTGCCCCTGGCGTGTGCGCT TGCTTCTCAGAAGGGCCAACCGCCCCCACCGCTAGGTCCGCATGACCCCA AGGGCTGGGTCACTGATGGACTGCCAGTTGACGAGACATCCCCAGCCTTC TTGCGCAAGAACAAGCACAAGGGAGGTCGGAAGTTCAGCCATACCAGTGA TCTGCTCGAGCGACTCCCGAAGGTGAACCGACAGGGCCTGCAAGCCGTGC GTGATTTTGTTGGCGGCAAGGGTCCGTATCTCCCTTTCCAGTTCTTCGAG GAGTGCTTCCCGCGAGAGGCCCAGGACATCGTTCTACAGGAGGTACGTGA TTGTTGGCCCGTTTTTTTTCTTGAGAAGGTTGATGAGATCATGTTCATGT GTGAGGTCGGTCTGTAACACCAAAACACGTTCCCGGGTGGTCTCAACAGT CCAAATGTTGTCGTTGCTCTTGCTGCTGCTGCTGCTCCAGTTGGAAATAC CATGGAACAGAATGTTTTAATCGCGCTTGGATTTAGGATTCACCGTCGAC ATGTTGTTGCAGCTGCGGCTGTTGGAGGCAACATGGAACATAATTTGTTT TTCGGGCACGCTGCACCTTTGACCCGATTTACTACCGTGTCACCCTTCCG TCGCCTCGGCCGATTCCtTTTTTTTTTTCAGACCAACAGCTACGCCAACT TCTGTGCGGAGACTACCAACCCGTCCCCGCTCCAGGAGGTGCGCCACAAG AAGAAGAAGTGGATGAAGGGGTTCCAGGGGATACCTACAACCGAGAACAA GGACAAGAAAAATGTGGCCGACTTTCAGCGGCATCACCTGTACGGGGTGA TTGGCATCCTCGTCACGGGCGGGCTCACGCAGAAACGGCGTTTCACCAAC CACTGGGGGTATCACCGGACCACGACTACAGCCGGGTACGAGAATGCATG CCTCGTGACTTGTTCCTCCTCTTCTATTCTCGCTTCTTCCACATCGCGCC CCCGACAGGCAAGGTTGACAAGAAGGACCCCAACTACGACTCCAAGCATC ACATCAGGTACAGTGCTGTTTTCTGTTGGCATGTCGACTCCTCCCTCTGC CCCCCCGCATCCGCAGGAGGAAACCAAAAAAATCATCGTTGTAGTAAATA TTCTCGCATGAGCTCGACACGAAGGTCTAGCTTGTATCCAGTGATTAATA ATCAGGCACACTGGCGTGGTTGGAGATCGTAAATTTATATAGTGACGGAT ATACGCAGCGTCGAGGAAGTCAAGGAACGAAGCACAGCAGGGGGGGGGCG GGGGAGGAGGGTAAGGCCCCTTTGTTGTCACTATGTGGTTGAAACTCGGC ATGCAGCGTTTTGAGGGCGGCCACCCCTTTTCGTTCCCCACAGCGCCGAA CGAATCGCACGTTAATTGCATGACATGTGCTGCTTCGCCGCTAAATGTGA TAACCCAAACGCCGTCAAAACTATTGTCTTGTATAACTGACACCTCCAGG AAGTTCGAGGAGGCGCTGAACCTCGCATGGAGCAAGCTTGCAGATCCTGG AGCGTGGCTTTCGTATGATGAGCAGATGGTCAAGTGCACGTCTAGATCTA TGTTTTTCATCATGAGGTACAACCCGAAGAAGCCCATCAAACATGGTGAG TGGTTTATCTTGTTTGGAGTAACGTCACCGGTTGTTCAACAACCCTTCTG GCGTGTAGGAAGGGTGTGGACTCCGTGTATGTTACAGTTCTTCCGGGGTC GACACGATTTTGCTACTTGCTGTGACTACATAGGTCGGGGGTGTGTGAAT ATCATGCTGCGAATGTTACAAGCACCCGGTCGGTTGGATGCGGGTGAGGC TCACGTTTGAAACTGGTTTTTTTTTGCAGTACGGCCACGAAATCCCCTGC CAAAAATGGGGCTTCGTTAGGTTGGCTCCTAAGCGGAGCAGTCGTTTCCC TGCACGAGGCATAGTACGCTTTTTTTCCTTGTACCAGGCATGCATCCTGC GCGCGCAACCGTGTAATCAATCTCCGCTCCGCTTCGTGCGCATATCTACC GTTTATGCCATCCGCAGGAAGACGTATAGCAGGCGCGAACAGGGAGGTGC TGACGAGCATGCAGCCGGTTGTTCGTTTGGACTACACGGGTGGCATGGGT GGTGTAGACGTCGCCGATCAGCGGCTTACCGCACACGCCCACGTGCACAA ACCCATGACGTATTTCTGGCGCCGTGTGTTCGACCAGAAGTTGCAGCAGG CCATCAGCAACGCGTACCTCCTCTTCCTGATGTGGGCGGAAGTGTTGCTT GCGCAATGCAAGGCGGTGTTGGCGGAGCGCCGGGAGGGGGGCCATGCTGC GGGCTCAGCAGCGGGCGCTGCCGAGCAGATGGGGGGTGGGGGTGACCTTA CCGTGGCAGAGCTTGAGGAACTCAGTGCTGGGTTGGCAAGAATGATCAAG ACAGAGCGCGTAGACTGGGACACCAGACTGGCATGCATCCTCATGGCCAA GTGCGGTGTCGGCCATAAGAACAAGGGGGGGAGGCGTACGTATAAGGAGG TCCCTGTGTATGACAGCAACGGCGCAAAAACGGTGAAGGTGTGTAGGGGA GGGACGTGCGTGAAGGGCGACGACCCCACGGCCCGCTACAAATCGAAGAG GACACGTGGGGTTTGTTGGTGCAGTATCTGTAGCAACGGGCTAGGGAAGA TGAGGGCCGTCCACCTCTGCAAGCAGTGCCGCGCGTCCACACAAGGGCAC GTGGCAGCCGCACTGGAGGCCGACCGTCATTACACGGCCATCAACTGGGC GACGTGATTGTCTTTGCTGGATTTTTCGTGGCAAAACTGCATGTACCTTG TTTTCTCCTAGCGATATGGATGGGGGTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig896:55601..60479+

>mRNA_P-littoralis_Contig896.17.1 ID=mRNA_P-littoralis_Contig896.17.1|Name=mRNA_P-littoralis_Contig896.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=996bp|location=Sequence derived from alignment at P-littoralis_Contig896:55601..60479+ (Pylaiella littoralis U1_48)
ATGCCTCGTGACTTGTTCCTCCTCTTCTATTCTCGCTTCTTCCACATCGC
GCCCCCGACAGGCAAGGTTGACAAGAAGGACCCCAACTACGACTCCAAGC
ATCACATCAGGAAGTTCGAGGAGGCGCTGAACCTCGCATGGAGCAAGCTT
GCAGATCCTGGAGCGTGGCTTTCGTATGATGAGCAGATGGTCAAGTGCAC
GTCTAGATCTATGTTTTTCATCATGAGGTACAACCCGAAGAAGCCCATCA
AACATGGAAGACGTATAGCAGGCGCGAACAGGGAGGTGCTGACGAGCATG
CAGCCGGTTGTTCGTTTGGACTACACGGGTGGCATGGGTGGTGTAGACGT
CGCCGATCAGCGGCTTACCGCACACGCCCACGTGCACAAACCCATGACGT
ATTTCTGGCGCCGTGTGTTCGACCAGAAGTTGCAGCAGGCCATCAGCAAC
GCGTACCTCCTCTTCCTGATGTGGGCGGAAGTGTTGCTTGCGCAATGCAA
GGCGGTGTTGGCGGAGCGCCGGGAGGGGGGCCATGCTGCGGGCTCAGCAG
CGGGCGCTGCCGAGCAGATGGGGGGTGGGGGTGACCTTACCGTGGCAGAG
CTTGAGGAACTCAGTGCTGGGTTGGCAAGAATGATCAAGACAGAGCGCGT
AGACTGGGACACCAGACTGGCATGCATCCTCATGGCCAAGTGCGGTGTCG
GCCATAAGAACAAGGGGGGGAGGCGTACGTATAAGGAGGTCCCTGTGTAT
GACAGCAACGGCGCAAAAACGGTGAAGGTGTGTAGGGGAGGGACGTGCGT
GAAGGGCGACGACCCCACGGCCCGCTACAAATCGAAGAGGACACGTGGGG
TTTGTTGGTGCAGTATCTGTAGCAACGGGCTAGGGAAGATGAGGGCCGTC
CACCTCTGCAAGCAGTGCCGCGCGTCCACACAAGGGCACGTGGCAGCCGC
ACTGGAGGCCGACCGTCATTACACGGCCATCAACTGGGCGACGTGA
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