mRNA_P-littoralis_Contig894.36.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 472 bits (1214), Expect = 9.640e-166 Identity = 230/269 (85.50%), Postives = 245/269 (91.08%), Query Frame = 2
Query: 2 DFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSSCLLELYKKHESARSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETP-AVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 805
DFRHTRARTGELVR+FVDEAGIAD+FPGFQSIAAGTNLLALCK++ CLLELY+K E ARSRERVARK+ Q PRHSR WSAAPEPVTHDKRRRLDRYCT PEAV+ L++AVAI+GCVLDMCGGPEDAVAQ F TCEVLTNDVSSRLS TNLDAS+LSFRD+F KAN GK+PDWVVTSPPYKGAVGFVKAALAVATKG ALKLPLSFLEPCADRGGWL + P AVC+FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRLVFCPE
Sbjct: 34 DFRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFCPE 302
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 273 bits (697), Expect = 2.620e-88 Identity = 138/232 (59.48%), Postives = 168/232 (72.41%), Query Frame = 2
Query: 65 IADRFPGFQSIAAGTNLLALCKQSSCLLELYKKHESARSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDG 757
+ D+FPG + + L LCK++ CLLEL+ ++ SR R++ + P +W+ APEPV KRR +DRYCTSP ++AL V+ISGCVLDMCGG +DAVA R TC+VLTNDV RLSP TNLDAS SF DDFL A+ G++PDW+VTSPPYKGA+ FVKAAL VA KG ALKLPLSFLEPCADR GWL A PA+C+ + RA+Y AH V+VGEFWGVWY G
Sbjct: 1 MGDKFPGLKCGDPSIDKLVLCKRAGCLLELFVLNQQRDSRAPTKRRAKRGP----KWTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAH-VRVGEFWGVWYPPG 227
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 274 bits (701), Expect = 6.160e-88 Identity = 146/271 (53.87%), Postives = 179/271 (66.05%), Query Frame = 2
Query: 5 FRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSSCLLELYKKHESARSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLS------PDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVF 796
+R R RT ++R FV AG+A++FPG + G + L CK++ C+L+ KH S +R +K + + W++APEP H KRR LDRYCTS AV+AL DAV +SG VLDMCGGP+DAVA++ TCEV+TNDVSSRLS PDT+LDAS +F +FL ++P+ VV SPPYKGAV FVKAAL VA G ALK LSFLEPC DR WL A P VCVFLRRA YT HV +GEFWGVWY GG G++LVF
Sbjct: 25 YRQLRPRTMSMLRAFVRNAGLAEKFPGVMPLGVGIDSLVRCKRAECVLKQNDKHMSDFCHDRARKKQKRNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYT-PEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 261 bits (667), Expect = 3.690e-84 Identity = 129/202 (63.86%), Postives = 152/202 (75.25%), Query Frame = 2
Query: 203 SSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 805
+++TPRH++ APEP TH +RR LDRYCTSPEA+DA AV I+GCVLDMCGGP DAVA R TCE+LTNDVSS DTNLDAS+ SF +DFL A SGKRP+WV TSPPY A+ FVKAA+++ATKG K+ + FLEPCAD GGWL P++CVFLRRAKYT A++ K EFWGVWY SC N +RLVFCPE
Sbjct: 2 AARTPRHAKGQRTAPEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLRRAKYTRANNAKTSEFWGVWYTQEMSCRNR--TRLVFCPE 201
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 255 bits (652), Expect = 4.030e-82 Identity = 126/145 (86.90%), Postives = 133/145 (91.72%), Query Frame = 2
Query: 2 DFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSSCLLELYKKHESARSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSR 436
DFR TRARTGEL+R+FVDEAG+ADRFPGFQS AAG NL ALCK+S CLLELYKKHE ARSRERVARK+ QTPRHSR WSAAPEPVTH KRRR DRYCTSPEAVDALRDAVAI+GCVLDMCGGP+DAVA FGGTCEVLTNDVSSR
Sbjct: 41 DFRQTRARTGELLRSFVDEAGLADRFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWARSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSSR 185
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 249 bits (636), Expect = 3.560e-79 Identity = 125/209 (59.81%), Postives = 152/209 (72.73%), Query Frame = 2
Query: 74 RFPGFQSIAAGTNLLALCKQSSCLLELYKKHESARSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSP-----DTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWL-AETPAVCVF 682
+FP + +G L LC + CLL+LY K +++ R ++ Q RH +W+ PEP H KRR LDRYCTSPEAV+AL AV + GCVLDMCGGP DA+A R G TC+V+TND+S+RLSP DTNLDAS+ SF DFL A G+RPDWV+TSPPYKGA+ +VK+AL++A KG ALKLPLSFLEPCADRGGWL A PAVCVF
Sbjct: 12 KFPSLNAEGSGMYRLVLCNRPDCLLQLYIKQLREKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVF 220
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 245 bits (625), Expect = 1.380e-78 Identity = 122/146 (83.56%), Postives = 130/146 (89.04%), Query Frame = 2
Query: 104 GTNLLALCKQSSCLLELYKKHESARSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPP 541
G+NL+ALCK+S LLELYKKHE ARSRERVA K+ QTPRHSR WSAAPEPVTHDKRRRLDRYCTSP AVDALRDAV I GCVLDMCGGPE AVA FGGTCEVLTNDV SRLSPD+NLDAS+LSF DFLKA+ GK+PDWVVTSPP
Sbjct: 2 GSNLVALCKRSGYLLELYKKHERARSRERVAWKAEQTPRHSRTWSAAPEPVTHDKRRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGKQPDWVVTSPP 147
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 243 bits (621), Expect = 8.310e-77 Identity = 126/203 (62.07%), Postives = 149/203 (73.40%), Query Frame = 2
Query: 17 RARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSSCLLELYKKHESA----RSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLP 613
R RT VR FVDE GIA++FP G + L LCK+S CLL+LYKKHE RS++R ARK++QTPRH+ PEP TH KRR LDRYCTSPEAV+AL AV+I+GC+LD+CGGP DAVA R G TCEVLTNDVSS DTNLDAS+ SF DDF A+SGKRPDWVVTSP YK A+ FVKAA+++AT+G + P
Sbjct: 2 RPRTSSQVRAFVDEIGIANQFPALDEGGLGASTLTLCKRSGCLLQLYKKHEQRMSKERSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVKAAMSLATRGVTVPAP 204
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 222 bits (566), Expect = 7.400e-70 Identity = 111/151 (73.51%), Postives = 116/151 (76.82%), Query Frame = 2
Query: 356 MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVGFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPAV-CVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 805
MCGGPEDAVA FGGTCEVLTNDVSSRLSP A+ GK+PDWVVTSPPYKGAVGFVKA LAVA KG AL+LPLSF +PCADRG WL + P V C FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRLVFCPE
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRLSP-----------------AHPGKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWYTDGG-CGKSGGSRLVFCPE 133
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Match: A0A6H5JUT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT6_9PHAE) HSP 1 Score: 216 bits (551), Expect = 7.380e-67 Identity = 109/135 (80.74%), Postives = 120/135 (88.89%), Query Frame = 2
Query: 71 DRFPGFQSIAAGTNLLALCKQSSCLLELYKKHESARSRERVARKSSQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLS 475
D+FPGFQSIAA TNLLALCK++ CLLELY+K E ARSRERVARK+ Q PRHSR WSAAPEPVTHDK RRLDRYCT PEAV+ L++AVAI+GCVLDMCGGPEDAVAQ F TCEVLTNDVSSRLS TNLDAS+L+
Sbjct: 23 DKFPGFQSIAARTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKCRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLN 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig894.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig894.36.1 >prot_P-littoralis_Contig894.36.1 ID=prot_P-littoralis_Contig894.36.1|Name=mRNA_P-littoralis_Contig894.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=151bp MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSback to top mRNA from alignment at P-littoralis_Contig894:95839..96945+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig894.36.1 ID=mRNA_P-littoralis_Contig894.36.1|Name=mRNA_P-littoralis_Contig894.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1107bp|location=Sequence derived from alignment at P-littoralis_Contig894:95839..96945+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig894:95839..96945+ >mRNA_P-littoralis_Contig894.36.1 ID=mRNA_P-littoralis_Contig894.36.1|Name=mRNA_P-littoralis_Contig894.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=453bp|location=Sequence derived from alignment at P-littoralis_Contig894:95839..96945+ (Pylaiella littoralis U1_48)back to top |