mRNA_P-littoralis_Contig893.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5KN69_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN69_9PHAE) HSP 1 Score: 135 bits (340), Expect = 4.570e-38 Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 4 GYWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLACGCRG 276
GYWQDG K+ MP+ DF GW ++PKAKG A L G NCV+W+SEHSYIG D K T+TCGC P CR CGC+GRKCSLACGCRG
Sbjct: 13 GYWQDGFKDHMPERDFNGKGWIINPKAKGSNASALTGENCVMWMSEHSYIGPDGKMVTMTCGCDPVKALKHNCRGCGCKGRKCSLACGCRG 103
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5KR74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR74_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.340e-37 Identity = 57/90 (63.33%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 4 GYWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLACGCR 273
GYWQDG K+ MP+ DF GWG++PKAKG A L G NCV+W+SEHSYIG D K T+TCGC P CR CGC+GRKCSLACGCR
Sbjct: 209 GYWQDGFKDHMPERDFNGKGWGINPKAKGSNASALTGENCVMWMSEHSYIGPDGKMVTMTCGCDPVKALKHNCRGCGCKGRKCSLACGCR 298
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5K9G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G2_9PHAE) HSP 1 Score: 140 bits (352), Expect = 3.660e-37 Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 4 GYWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLACGCRG 276
GYWQDG K+ MP+ DF GWG++PKAKG A L G NCV+W+SEHSYIG D K T+TCGC+P CR CGC+GRKCSLACGCRG
Sbjct: 298 GYWQDGFKDHMPERDFNGKGWGINPKAKGSNASALTGENCVMWMSEHSYIGPDGKLVTMTCGCNPVKALKHNCRGCGCKGRKCSLACGCRG 388
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5JQD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD3_9PHAE) HSP 1 Score: 137 bits (344), Expect = 8.110e-36 Identity = 58/91 (63.74%), Postives = 65/91 (71.43%), Query Frame = 1
Query: 4 GYWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLACGCRG 276
GYWQDG K+ MP+ DF GWG+DPKAKG A L G N V+W+SEHSYIG D K T+TCGC P CR CGC+GRKCSLACGCRG
Sbjct: 444 GYWQDGFKDHMPERDFNRKGWGIDPKAKGSNASALTGENSVMWMSEHSYIGPDGKMVTMTCGCDPVKAFKHNCRGCGCKGRKCSLACGCRG 534
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5KNV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV6_9PHAE) HSP 1 Score: 132 bits (332), Expect = 1.150e-34 Identity = 58/100 (58.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query: 4 GYWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLA---------CGCRG 276
GYWQDG K+ MP+ DF GWG++PKAKG A L G NCV+W+SEHSYIG D K T+TCGC+P CR CGC+GRKCSLA CGCRG
Sbjct: 259 GYWQDGFKDHMPERDFNGKGWGINPKAKGSNASALTGENCVMWMSEHSYIGPDGKLVTMTCGCNPVKALKHNCRGCGCKGRKCSLARKGRECSLACGCRG 358
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5K0U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U7_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.990e-31 Identity = 54/90 (60.00%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 7 YWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLACGCRG 276
YWQ+GL+ETMP +F GWGVDP+ KG +EL NCVL LSE+SYIG D KT TL CGC+P++ +C C C+ RKCSLACGCRG
Sbjct: 329 YWQNGLRETMPATEFAGKGWGVDPRGKGSNGDELTAGNCVLRLSEYSYIGPDRKTVTLACGCNPEM---YLCNRCRCKDRKCSLACGCRG 415
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5JJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH5_9PHAE) HSP 1 Score: 123 bits (308), Expect = 7.340e-31 Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 1
Query: 7 YWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLACG 267
YWQ+GL+E MP +F GWGVDP+ KG +++ELI NCVLWLSE+SYIG + KT TL CGC+PD +C C C+ RKCSLACG
Sbjct: 426 YWQNGLREAMPTTEFAYEGWGVDPRGKGSDSDELIAENCVLWLSEYSYIGPNRKTVTLACGCNPDTA---LCNRCRCKDRKCSLACG 509
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5KUW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW9_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.960e-21 Identity = 46/97 (47.42%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 1 MGYWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRG------RKCSLACGCR 273
+GYWQDG E +P DF GWG+DP G + NCVLWLSE+ Y+GTD+KT+T CGC P + G R RKCSLAC CR
Sbjct: 364 LGYWQDGCLEVVPARDFNGGGWGIDPTGVGGSPGHMTAENCVLWLSEYPYVGTDNKTQTEKCGCKPAPGKKNL----GVRXXXXKARRKCSLACVCR 456
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5JT11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT11_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 4.410e-21 Identity = 46/90 (51.11%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 7 YWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTCGCHPDLPPHRMCRSCGCRGRKCSLACGCRG 276
YWQ+GL+E MP +F GW VDP+ K + EL NCVL LSE SYIG D KT TL CGC+P+ +C C + RKCSL RG
Sbjct: 821 YWQNGLREAMPATEFAGKGWSVDPQGKRNDGVELTVKNCVLDLSEFSYIGPDRKTITLACGCNPETT---LCNRCRWKDRKCSLXXXXRG 907
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Match: A0A6H5JVZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVZ4_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 5.910e-21 Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 31 TMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYIGTDSKTKTLTC-GCHPDLPPHRM-CRSCGCRG--RKCSLACGCRG 276
T+P DFK+ GWGVDP K + EL NCV+WLSEHSY+G+D+KTKTL C C P + C+ C C RKCSL CGCRG
Sbjct: 508 TVPPRDFKDQGWGVDPTLKNFASLELTKENCVMWLSEHSYVGSDNKTKTLACKDCRPPTIGRPINCQRCRCNKDERKCSLTCGCRG 593 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig893.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig893.19.1 >prot_P-littoralis_Contig893.19.1 ID=prot_P-littoralis_Contig893.19.1|Name=mRNA_P-littoralis_Contig893.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=92bp MGYWQDGLKETMPKIDFKNHGWGVDPKAKGREAEELIGSNCVLWLSEHSYback to top mRNA from alignment at P-littoralis_Contig893:81987..82262+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig893.19.1 ID=mRNA_P-littoralis_Contig893.19.1|Name=mRNA_P-littoralis_Contig893.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=276bp|location=Sequence derived from alignment at P-littoralis_Contig893:81987..82262+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig893:81987..82262+ >mRNA_P-littoralis_Contig893.19.1 ID=mRNA_P-littoralis_Contig893.19.1|Name=mRNA_P-littoralis_Contig893.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=276bp|location=Sequence derived from alignment at P-littoralis_Contig893:81987..82262+ (Pylaiella littoralis U1_48)back to top |