mRNA_P-littoralis_Contig893.18.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE) HSP 1 Score: 245 bits (625), Expect = 4.530e-73 Identity = 126/218 (57.80%), Postives = 152/218 (69.72%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLSLKVRG 635
YF R+L S W+ ELLLV YDR LVPVIK EQ GRTE++GEC+R FDP S +P+P+ QY WLR+D KA RDGIAANLAM+VL D++W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPD+GE EL ++HFIV AK YWGK+F KW+V+SVDTD WMIILLAM+T L + G
Sbjct: 304 YFKRQLLSTWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEG 521
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 246 bits (629), Expect = 5.500e-71 Identity = 126/218 (57.80%), Postives = 153/218 (70.18%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLSLKVRG 635
YF R+L SKW+ ELL+V YDR LVPVIK EQ GRTE++GEC+R FDP S +P+P+ QY WLR+D KA RDGIAANLAM+VL D++W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPD+GE EL ++HFIV AK YWGK+F KW+V+SVDTD WMIILLAM+T L + G
Sbjct: 393 YFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEG 610
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 246 bits (629), Expect = 2.140e-70 Identity = 126/218 (57.80%), Postives = 153/218 (70.18%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLSLKVRG 635
YF R+L SKW+ ELL+V YDR LVPVIK EQ GRTE++GEC+R FDP S +P+P+ QY WLR+D KA RDGIAANLAM+VL D++W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPD+GE EL ++HFIV AK YWGK+F KW+V+SVDTD WMIILLAM+T L + G
Sbjct: 1412 YFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEG 1629
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: D8LEN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN1_ECTSI) HSP 1 Score: 236 bits (603), Expect = 7.870e-70 Identity = 119/213 (55.87%), Postives = 150/213 (70.42%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEALSVG----GAGDCVEE-EPLLHFRN--GAAPGVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLS 620
YF +L SKW+ ELL+V YDR LVPVIK HEQ GR+E+IGEC+R FDP S +P+P+ QY SWLR+D KA RDGIAA+LA +VL D +W+ D + +AFYGV EP G+ AE + + GAG+ + E EPLLHFR+ GV+RQRGPD+GE EL ++HFI AK YWG+ FDKW+V+SVDTD WMIILLAM+T L+
Sbjct: 48 YFKNQLLSKWLQSTELLVVCYDRQELVPVIKGHEQLGRSEKIGECSRTFDPKSTDPVPSLQYGSWLRADGKAARDGIAAHLATRVLADDVWTGDTKPNGIVAFYGVGGEPDLSADHPPGVDAEGIGLEMAREGAGEALPETEPLLHFRDRTDTIEGVERQRGPDIGEAELSVIHFIAWAKKYWGRSFDKWVVSSVDTDLWMIILLAMTTGWLT 260
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 238 bits (607), Expect = 2.780e-69 Identity = 123/217 (56.68%), Postives = 150/217 (69.12%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEA-LSVGGAGDCVE---EEPLLHFRNG--AAPGVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLSLKVRG 635
Y +R+L SKW+ ELLLV YDR LVPVIK EQ GRTE++GEC+R FDP S +P+ QY WLR+D KA R+GIAA LAM+VL D++W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG PGV+RQ GPD+GE EL ++HFIV AK YWGK+FDKW+V+SVDTD WMIILLAM+T L + G
Sbjct: 523 YRMRQLLSKWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVTALQYGPWLRADRKAARNGIAAYLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLSADHPAGVDAEGGLEMGGVGATEALSGTEPLLHFRNGNDPTPGVERQLGPDIGEAELSVIHFIVWAKKYWGKNFDKWIVSSVDTDLWMIILLAMTTGWLRPRGEG 739
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5JUY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY2_9PHAE) HSP 1 Score: 232 bits (591), Expect = 1.480e-66 Identity = 116/216 (53.70%), Postives = 148/216 (68.52%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEALSVGGAGD---CVEEEPLLHFRNGAAP--GVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLSLKVRG 635
YF ++L SKW+ +LL+V YDR LVP IK HEQ GRTE++GEC+R FDP S +P+P+ QY SWLR+D KA R GIAANLAM+VL D +W+ D + +AFYGV EPG G++AE + + G G E LLHFRNG P V+R RGPD+ E EL ++HFI +AK+YWGK FDKW+V+S DTD W IILLAM+T L+ + G
Sbjct: 82 YFKKQLLSKWLKSTKLLVVCYDRQELVPAIKGHEQLGRTEKLGECSRTFDPKSTDPVPSLQYGSWLRADGKAARAGIAANLAMRVLADDVWTGDTKPNGIVAFYGVGGEPGLSGDNHAGVNAEDVGLDGVGSRMALAETVLLLHFRNGTGPIPDVERHRGPDIREAELCVIHFIARAKAYWGKKFDKWVVSSEDTDLWTIILLAMTTGWLTPRGEG 297
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5L0B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B5_9PHAE) HSP 1 Score: 221 bits (562), Expect = 1.240e-63 Identity = 115/199 (57.79%), Postives = 140/199 (70.35%), Query Frame = 3
Query: 45 ELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEA--LSVG--GAGDCVEE-EPLLHFRNGA--APGVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLS 620
ELL+V YDR LVPVIK HEQ GRTE++GEC+R FDP S +P+P+ QY WLR+D A RDGIA +LA +VL D +W+ D + AFYGV EP G+ AE L VG GAG + E EPLLHFR+G GV+RQRGPD+GE EL ++HFIV AK YWG+ FDKW+V+SVDTD WMIILLAM+T L+
Sbjct: 125 ELLVVCYDRQELVPVIKGHEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGMAARDGIATHLATRVLADDVWTGDTKPNGIAAFYGVGGEPDLSVDHPPGVHAEGIGLEVGREGAGKALSETEPLLHFRDGTNTIEGVERQRGPDIGEAELSVIHFIVWAKKYWGESFDKWIVSSVDTDLWMIILLAMTTGWLT 323
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5KTD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD3_9PHAE) HSP 1 Score: 219 bits (557), Expect = 3.970e-63 Identity = 127/284 (44.72%), Postives = 155/284 (54.58%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPG-----------------------KEESIETGISAE---------------------------------------------ALSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLSLKVRG 635
YF R+L SKW+ ELL+V YDR LVPVIK EQ GRTE++GEC+R FDP S +P+P+ QY WLR+D KA RDGIAANLAM+VL D++W+ D + +AFYGV EPG + E GI+A L +GG G EPLLHFRNG P GV+RQRGPD+GE EL ++HFIV AK YWGK+F KW+V+SVDTD WMIILLAM+T L + G
Sbjct: 250 YFKRQLLSKWLQPTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPSGVTRRRFPEPYHSFTFETEXARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPVLGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEG 533
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE) HSP 1 Score: 222 bits (566), Expect = 2.940e-62 Identity = 125/250 (50.00%), Postives = 150/250 (60.00%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSED---NG-----------------------------RDRTIAFYGVCSEPGKEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMSTERLSLKVRG 635
YF + SKW+ ELLLV YDR LVPVIK EQ GRTE++GEC+R FDP S +P+P+ QY WLR+D K RDGIAA LAM+VL D++W+ D NG +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPD+GE EL ++HFIV AK YWGK+F KW+V+SVDTD WMIILLAM+T L + G
Sbjct: 700 YFKSQPLSKWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKVTRDGIAAYLAMRVLADEVWTGDTKSNGIVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEG 949
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Match: A0A6H5JT24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT24_9PHAE) HSP 1 Score: 218 bits (554), Expect = 3.560e-62 Identity = 109/204 (53.43%), Postives = 137/204 (67.16%), Query Frame = 3
Query: 3 YFVRELYSKWMMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSQYQSWLRSDSKAPRDGIAANLAMKVLVDKMWSEDNGRDRTIAFYGVCSEPGKEESIETGISAEALSVGGAGDCVEEEPLLHFRNGA--APGVQRQRGPDVGETELPLVHFIVQAKSYWGKDFDKWLVTSVDTDEWMIILLAMST 608
YF ++ +SKW+ EL +V YDR LVP I+ HEQ GRTE +GEC+R FDP S +P+P + SWLR D KA RDGIAANLAM+VL D +W+ D + +AFYGV EP G+ A+ VG +E PLLH R+ P V+R RGPD+GE EL ++HFI +AK YWGK FDKW+ +SVDTD WMIILLAM+T
Sbjct: 87 YFKKQFFSKWLKSTELFVVCYDRQELVPAIRGHEQLGRTETLGECSRTFDPKSTDPVPLLHHGSWLRVDGKAARDGIAANLAMRVLADDVWTADTKPNGIVAFYGVGGEPRLSADNPAGVDAD---VG-----LETVPLLHVRDETDPIPDVERHRGPDIGEAELFVIHFIARAKKYWGKTFDKWVASSVDTDLWMIILLAMTT 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig893.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig893.18.1 >prot_P-littoralis_Contig893.18.1 ID=prot_P-littoralis_Contig893.18.1|Name=mRNA_P-littoralis_Contig893.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp MMERELLLVSYDRAVLVPVIKEHEQAGRTEEIGECARVFDPLSEEPIPTSback to top mRNA from alignment at P-littoralis_Contig893:80800..81706+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig893.18.1 ID=mRNA_P-littoralis_Contig893.18.1|Name=mRNA_P-littoralis_Contig893.18.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=907bp|location=Sequence derived from alignment at P-littoralis_Contig893:80800..81706+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig893:80800..81706+ >mRNA_P-littoralis_Contig893.18.1 ID=mRNA_P-littoralis_Contig893.18.1|Name=mRNA_P-littoralis_Contig893.18.1|organism=Pylaiella littoralis U1_48|type=CDS|length=615bp|location=Sequence derived from alignment at P-littoralis_Contig893:80800..81706+ (Pylaiella littoralis U1_48)back to top |