prot_P-littoralis_Contig893.6.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig893.6.3
Unique Nameprot_P-littoralis_Contig893.6.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length458
Homology
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.520e-36
Identity = 136/333 (40.84%), Postives = 165/333 (49.55%), Query Frame = 0
Query:  137 AEEVRLAAE--ARSPPSRIIDKETRRRLLDYFVFRPXXXXXXXXXXXXXXXXXXTAVGGFKTMMAKIDGRLYNDDDEERRKSDTLGSSGRGLRFSLGSSRGGGSTPGINSSTGSSGRIFGGVFSLLPSRAAASSSPASPPAEATTLPL--PPDASSLPPTGAAGET--NAGDGNAEGRSSGDPEEGGLAAL--------PADSRRTGRGSEDEPRGQAAAXXXXXXXXXXXXTVAKDSSEGGREGCGCSPTTGNAEATGGDKAGGEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNN 455
            AEE RL AE   R  P  ++DKETRRR+L+YF    XXXXXXXX                               +  +R+ D +G SGRG+RF    +R GG+  GI+ +   SGR+F GVFS  P RA AS SP  PP  A    L  P           AG    +  +   + R++ D EEG  AA         PA    T R +  E R  AAA              A    + G EG  C P T       G++A GE ST  SCIVCFGDY YG+ELCRL C HLYHA CIDEWLDG NH WCPLCKTD+++ +    PA S+N
Sbjct:    5 AEEARLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXX------------------XXXXXXXXXXXPSNTAQREGD-IGGSGRGIRFPK-LARVGGNASGISGA--GSGRLFAGVFS--PYRAPASGSPPRPPGAAXXXSLRSPXXXXXXXXXRRAGRDAYSTAEHVDQERAAADREEGLAAAAAALASDAEPATDSCTNRPAGGEIRDAAAAGPAAGSETDVVVAEASAGEKAGDEGPSC-PRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSN 312          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.710e-27
Identity = 132/335 (39.40%), Postives = 166/335 (49.55%), Query Frame = 0
Query:  138 EEVRLAAE--ARSPPSRIIDKETRRRLLDYFVFRPXXXXXXXXXXXXXXXXXXTAVGGFKTMMAKIDGRLYNDDDEERRKSDTLGSSGRGLRFSLGSSRGGGSTPGINSSTGSSGRIFGGVFSLLPSRAAASSSPASPPAEATTLPLPPDASSLPPTGA---AGET--NAGDGNAEGRSSGDPEEG---GLAALPADSRRTGRGSEDEPRG--------QAAAXXXXXXXXXXXXTVAKDSSEGGREGCGCSPTTGNAEATGGDKAGGEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSN 454
            EE  L AE   R  P  ++DKETRRR+L+YF    XXXXXXXXXXXXXXXX  +                 N  +  +R+ D  GS GRG+RF    +RGG    G + +   SGR+F GV S  P RA AS SP  P                        AG    N  +   + R++ + EEG     A L +D+        D P G        + AA            +V +++   G EG     T  +A    G++A GE ST  SCIVCFGDY YG+ELCRL C HLYHA CIDEWLDG NH WCPLCKTD+++ +    PA S+
Sbjct:    9 EEATLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXXXXXXXXXXSRS-----------------NPSNTAQREGDICGS-GRGVRFPK-LARGGSIASGTSGA--GSGRLFVGVLS--PCRAPASGSPPRPXXXXXXXXXXXXXXXXXXXXXXRRAGRDAFNTAEHIDQERAAANREEGLPAAAAVLASDAEPETDSGTDRPAGGEIRAAAAEGAAARNETDVVVVGTSVGEEAPGAGDEGSSYPRT--DAGGVLGEEAKGEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIISTSGYLNPAGSS 318          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 5.920e-23
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0
Query:  389 WSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSN 454
            WS +ESCI+CFG+YA GD LCRLPCRH YHA CID WLD   HSWCPLCK+ ++    P+ P NS+
Sbjct:   72 WSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLL---PSEPRNSS 134          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.410e-21
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 0
Query:  389 WSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNN 455
            WS+ ESCI+CFG+YA GD LCRLPCRH YHA CID WLDG  HSWCPLCK+ ++    P+ P N ++
Sbjct:  452 WSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLP---PSEPRNGSD 515          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.300e-20
Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 0
Query:  387 GEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 456
            GEWST ++CIVCFGDY  GD L RLPCRH+YHA CIDEWLD A    CPLCKTD+     P  P  S +T
Sbjct:  251 GEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSIST 320          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.190e-19
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query:  387 GEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 456
            GEWST ++CIVCF DY  GD L RLPCRH+YHA CIDEWLD A    CPLCKTD+     P   + S +T
Sbjct:  151 GEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRSRSIST 220          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 5.610e-18
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query:  387 GEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 456
            GEWST ++CIVCFGDY  GD L  LPCRH+YHA CIDEWLD A    CPLCKTD+     P   + S +T
Sbjct:  344 GEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDLRHATPPDDRSRSIST 413          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A7S0QVM1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVM1_9CHLO)

HSP 1 Score: 70.5 bits (171), Expect = 3.710e-11
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  392 AESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDV 441
            AE C +C  D+A GD+L RLPCRH +H TCIDEWL     S CP+CK D+
Sbjct:   67 AELCTICLDDFAKGDQLRRLPCRHHFHVTCIDEWL--GRRSMCPVCKHDL 114          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A0E0LQD2_ORYPU (RING-type domain-containing protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0LQD2_ORYPU)

HSP 1 Score: 72.4 bits (176), Expect = 1.090e-10
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  390 STAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 456
            ST+ SC +C  DY++G++L  LPCRH +HATC+D WL     ++CP+CK D  AG +  +P  S +T
Sbjct:   63 STSSSCAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWK-TFCPVCKRDASAGTS--KPPASEST 126          
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A0E0I6A8_ORYNI (RING-type domain-containing protein n=1 Tax=Oryza nivara TaxID=4536 RepID=A0A0E0I6A8_ORYNI)

HSP 1 Score: 72.4 bits (176), Expect = 2.140e-10
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  390 STAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 456
            ST+ SC +C  DY++G++L  LPCRH +HATC+D WL     ++CP+CK D  AG +  +P  S +T
Sbjct:  110 STSSSCAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWK-TFCPVCKRDASAGTS--KPPASEST 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSX3_ECTSI1.520e-3640.84RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE4.710e-2739.40RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE5.920e-2363.64RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI3.410e-2162.69RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI2.300e-2062.86RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE3.190e-1960.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI5.610e-1860.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S0QVM1_9CHLO3.710e-1158.00Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A0E0LQD2_ORYPU1.090e-1046.27RING-type domain-containing protein n=1 Tax=Oryza ... [more]
A0A0E0I6A8_ORYNI2.140e-1046.27RING-type domain-containing protein n=1 Tax=Oryza ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 395..437
e-value: 8.3E-6
score: 35.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 394..438
e-value: 3.1E-9
score: 37.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 395..438
score: 11.36805
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 379..444
e-value: 4.4E-16
score: 59.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..34
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 38..439
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 394..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig893contigP-littoralis_Contig893:15354..22338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig893.6.3mRNA_P-littoralis_Contig893.6.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig893 14665..22338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig893.6.3 ID=prot_P-littoralis_Contig893.6.3|Name=mRNA_P-littoralis_Contig893.6.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=458bp
MSSPAAYGERASSARVQGAEQLGETTTTTPAAAAQQAPPAPPAPPAPSAP
ALEPPEPPVLYQDALFLFIAEGRIPSRTEMLVFALGFVSMISLVFITSDL
MNSKALRPWYVLVFMVTSSYFGVLVWSQRVAVAEYAAEEVRLAAEARSPP
SRIIDKETRRRLLDYFVFRPPEEEKKVETNNGSSSYSSTAVGGFKTMMAK
IDGRLYNDDDEERRKSDTLGSSGRGLRFSLGSSRGGGSTPGINSSTGSSG
RIFGGVFSLLPSRAAASSSPASPPAEATTLPLPPDASSLPPTGAAGETNA
GDGNAEGRSSGDPEEGGLAALPADSRRTGRGSEDEPRGQAAAATVAAAAA
AASATVAKDSSEGGREGCGCSPTTGNAEATGGDKAGGEWSTAESCIVCFG
DYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARP
ANSNNTS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD