mRNA_P-littoralis_Contig893.6.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig893.6.3
Unique NamemRNA_P-littoralis_Contig893.6.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D8LSX3_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSX3_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 5.460e-36
Identity = 136/333 (40.84%), Postives = 165/333 (49.55%), Query Frame = 1 
Query:  649 AEEVRLAAE--ARSPPSRIIDKETRRRLLDYFVFRPXXXXXXXXXXXXXXXXXXTAVGGFKTMMAKIDGRLYNDDDEERRKSDTLGSSGRGLRFSLGSSRGGGSTPGINSSTGSSGRIFGGVFSLLPSRAAASSSPASPPAEATTLPL--PPDASSLPPTGAAGET--NAGDGNAEGRSSGDPEEGGLAAL--------PADSRRTGRGSEDEPRGQAAAXXXXXXXXXXXXTVAKDSSEGGREGCGCSPTTGNAEATGGDKAGGEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNN 1605
            AEE RL AE   R  P  ++DKETRRR+L+YF    XXXXXXXX                               +  +R+ D +G SGRG+RF    +R GG+  GI+ +   SGR+F GVFS  P RA AS SP  PP  A    L  P           AG    +  +   + R++ D EEG  AA         PA    T R +  E R  AAA              A    + G EG  C P T       G++A GE ST  SCIVCFGDY YG+ELCRL C HLYHA CIDEWLDG NH WCPLCKTD+++ +    PA S+N
Sbjct:    5 AEEARLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXX------------------XXXXXXXXXXXPSNTAQREGD-IGGSGRGIRFPK-LARVGGNASGISGA--GSGRLFAGVFS--PYRAPASGSPPRPPGAAXXXSLRSPXXXXXXXXXRRAGRDAYSTAEHVDQERAAADREEGLAAAAAALASDAEPATDSCTNRPAGGEIRDAAAAGPAAGSETDVVVAEASAGEKAGDEGPSC-PRTDAKGGVQGEEAKGEGSTGGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIMSTSGYLDPAGSSN 312
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BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A6H5K661_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K661_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.140e-26
Identity = 132/335 (39.40%), Postives = 166/335 (49.55%), Query Frame = 1 
Query:  652 EEVRLAAE--ARSPPSRIIDKETRRRLLDYFVFRPXXXXXXXXXXXXXXXXXXTAVGGFKTMMAKIDGRLYNDDDEERRKSDTLGSSGRGLRFSLGSSRGGGSTPGINSSTGSSGRIFGGVFSLLPSRAAASSSPASPPAEATTLPLPPDASSLPPTGA---AGET--NAGDGNAEGRSSGDPEEG---GLAALPADSRRTGRGSEDEPRG--------QAAAXXXXXXXXXXXXTVAKDSSEGGREGCGCSPTTGNAEATGGDKAGGEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSN 1602
            EE  L AE   R  P  ++DKETRRR+L+YF    XXXXXXXXXXXXXXXX  +                 N  +  +R+ D  GS GRG+RF    +RGG    G + +   SGR+F GV S  P RA AS SP  P                        AG    N  +   + R++ + EEG     A L +D+        D P G        + AA            +V +++   G EG     T  +A    G++A GE ST  SCIVCFGDY YG+ELCRL C HLYHA CIDEWLDG NH WCPLCKTD+++ +    PA S+
Sbjct:    9 EEATLEAEEAGRRRPPGVLDKETRRRVLNYFXXXXXXXXXXXXXXXXXXXXSRS-----------------NPSNTAQREGDICGS-GRGVRFPK-LARGGSIASGTSGA--GSGRLFVGVLS--PCRAPASGSPPRPXXXXXXXXXXXXXXXXXXXXXXRRAGRDAFNTAEHIDQERAAANREEGLPAAAAVLASDAEPETDSGTDRPAGGEIRAAAAEGAAARNETDVVVVGTSVGEEAPGAGDEGSSYPRT--DAGGVLGEEAKGEGSTRGSCIVCFGDYTYGEELCRLRCGHLYHAKCIDEWLDGENHGWCPLCKTDIISTSGYLNPAGSS 318
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BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A6H5KUH7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH7_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.060e-22
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 1 
Query: 1405 WSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSN 1602
            WS +ESCI+CFG+YA GD LCRLPCRH YHA CID WLD   HSWCPLCK+ ++    P+ P NS+
Sbjct:   72 WSCSESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDSPGHSWCPLCKSSLLL---PSEPRNSS 134
[Close]
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D8LQW5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW5_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 6.990e-21
Identity = 42/67 (62.69%), Postives = 51/67 (76.12%), Query Frame = 1 
Query: 1405 WSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNN 1605
            WS+ ESCI+CFG+YA GD LCRLPCRH YHA CID WLDG  HSWCPLCK+ ++    P+ P N ++
Sbjct:  452 WSSGESCIICFGEYAEGDVLCRLPCRHTYHAECIDAWLDGPGHSWCPLCKSSLLP---PSEPRNGSD 515
[Close]
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D7FRQ0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 4.080e-20
Identity = 44/70 (62.86%), Postives = 49/70 (70.00%), Query Frame = 1 
Query: 1399 GEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 1608
            GEWST ++CIVCFGDY  GD L RLPCRH+YHA CIDEWLD A    CPLCKTD+     P  P  S +T
Sbjct:  251 GEWSTGQACIVCFGDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDPCRSIST 320
[Close]
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A6H5JEY0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY0_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 5.070e-19
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 1 
Query: 1399 GEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 1608
            GEWST ++CIVCF DY  GD L RLPCRH+YHA CIDEWLD A    CPLCKTD+     P   + S +T
Sbjct:  151 GEWSTGQACIVCFSDYEPGDRLARLPCRHVYHAQCIDEWLDRAKLPSCPLCKTDLRHATPPDDRSRSIST 220
[Close]
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: D7FRQ1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 9.580e-18
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 1 
Query: 1399 GEWSTAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 1608
            GEWST ++CIVCFGDY  GD L  LPCRH+YHA CIDEWLD A    CPLCKTD+     P   + S +T
Sbjct:  344 GEWSTGQACIVCFGDYEPGDRLALLPCRHVYHAQCIDEWLDRAKIPSCPLCKTDLRHATPPDDRSRSIST 413
[Close]
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A7S0QVM1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVM1_9CHLO)

HSP 1 Score: 70.5 bits (171), Expect = 4.510e-11
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1 
Query: 1414 AESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDV 1563
            AE C +C  D+A GD+L RLPCRH +H TCIDEWL     S CP+CK D+
Sbjct:   67 AELCTICLDDFAKGDQLRRLPCRHHFHVTCIDEWL--GRRSMCPVCKHDL 114
[Close]
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A0E0LQD2_ORYPU (RING-type domain-containing protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0LQD2_ORYPU)

HSP 1 Score: 72.4 bits (176), Expect = 1.410e-10
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1 
Query: 1408 STAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 1608
            ST+ SC +C  DY++G++L  LPCRH +HATC+D WL     ++CP+CK D  AG +  +P  S +T
Sbjct:   63 STSSSCAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWK-TFCPVCKRDASAGTS--KPPASEST 126
[Close]
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Match: A0A0E0I6A8_ORYNI (RING-type domain-containing protein n=1 Tax=Oryza nivara TaxID=4536 RepID=A0A0E0I6A8_ORYNI)

HSP 1 Score: 72.4 bits (176), Expect = 2.840e-10
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1 
Query: 1408 STAESCIVCFGDYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARPANSNNT 1608
            ST+ SC +C  DY++G++L  LPCRH +HATC+D WL     ++CP+CK D  AG +  +P  S +T
Sbjct:  110 STSSSCAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWK-TFCPVCKRDASAGTS--KPPASEST 173
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig893.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSX3_ECTSI5.460e-3640.84RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K661_9PHAE1.140e-2639.40RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KUH7_9PHAE1.060e-2263.64RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LQW5_ECTSI6.990e-2162.69RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ0_ECTSI4.080e-2062.86RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEY0_9PHAE5.070e-1960.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FRQ1_ECTSI9.580e-1860.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S0QVM1_9CHLO4.510e-1158.00Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A0E0LQD2_ORYPU1.410e-1046.27RING-type domain-containing protein n=1 Tax=Oryza ... [more]
A0A0E0I6A8_ORYNI2.840e-1046.27RING-type domain-containing protein n=1 Tax=Oryza ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig893contigP-littoralis_Contig893:14665..22338 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSX3
PFAMsPA,zf-RING_11,zf-RING_2
Model size1614
Max annot lvl2759|Eukaryota
KEGG koko:K03257,ko:K15694
KEGG Pathwayko03013,map03013
KEGG ModuleM00428
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.49e-37
EggNOG OGsKOG4628@1|root,KOG4628@2759|Eukaryota
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-26_001750.1
EC2.3.2.27
Descriptionprotein modification by small protein conjugation or removal
Cds size1374
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko03012,ko03019,ko04121,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig893.6.3prot_P-littoralis_Contig893.6.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig893 15354..22338 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791782.2333694-UTR-P-littoralis_Contig893:14664..148881680791782.2333694-UTR-P-littoralis_Contig893:14664..14888Pylaiella littoralis U1_48UTRP-littoralis_Contig893 14665..14888 +
1680791782.2484808-UTR-P-littoralis_Contig893:15337..153531680791782.2484808-UTR-P-littoralis_Contig893:15337..15353Pylaiella littoralis U1_48UTRP-littoralis_Contig893 15338..15353 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791782.270398-CDS-P-littoralis_Contig893:15353..156231680791782.270398-CDS-P-littoralis_Contig893:15353..15623Pylaiella littoralis U1_48CDSP-littoralis_Contig893 15354..15623 +
1680791782.2824771-CDS-P-littoralis_Contig893:17194..173331680791782.2824771-CDS-P-littoralis_Contig893:17194..17333Pylaiella littoralis U1_48CDSP-littoralis_Contig893 17195..17333 +
1680791782.294271-CDS-P-littoralis_Contig893:18994..195271680791782.294271-CDS-P-littoralis_Contig893:18994..19527Pylaiella littoralis U1_48CDSP-littoralis_Contig893 18995..19527 +
1680791782.3061266-CDS-P-littoralis_Contig893:20365..205581680791782.3061266-CDS-P-littoralis_Contig893:20365..20558Pylaiella littoralis U1_48CDSP-littoralis_Contig893 20366..20558 +
1680791782.3189373-CDS-P-littoralis_Contig893:21298..214231680791782.3189373-CDS-P-littoralis_Contig893:21298..21423Pylaiella littoralis U1_48CDSP-littoralis_Contig893 21299..21423 +
1680791782.329522-CDS-P-littoralis_Contig893:22224..223381680791782.329522-CDS-P-littoralis_Contig893:22224..22338Pylaiella littoralis U1_48CDSP-littoralis_Contig893 22225..22338 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig893.6.3

>prot_P-littoralis_Contig893.6.3 ID=prot_P-littoralis_Contig893.6.3|Name=mRNA_P-littoralis_Contig893.6.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=458bp
MSSPAAYGERASSARVQGAEQLGETTTTTPAAAAQQAPPAPPAPPAPSAP
ALEPPEPPVLYQDALFLFIAEGRIPSRTEMLVFALGFVSMISLVFITSDL
MNSKALRPWYVLVFMVTSSYFGVLVWSQRVAVAEYAAEEVRLAAEARSPP
SRIIDKETRRRLLDYFVFRPPEEEKKVETNNGSSSYSSTAVGGFKTMMAK
IDGRLYNDDDEERRKSDTLGSSGRGLRFSLGSSRGGGSTPGINSSTGSSG
RIFGGVFSLLPSRAAASSSPASPPAEATTLPLPPDASSLPPTGAAGETNA
GDGNAEGRSSGDPEEGGLAALPADSRRTGRGSEDEPRGQAAAATVAAAAA
AASATVAKDSSEGGREGCGCSPTTGNAEATGGDKAGGEWSTAESCIVCFG
DYAYGDELCRLPCRHLYHATCIDEWLDGANHSWCPLCKTDVVAGAAPARP
ANSNNTS*
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mRNA from alignment at P-littoralis_Contig893:14665..22338+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig893.6.3 ID=mRNA_P-littoralis_Contig893.6.3|Name=mRNA_P-littoralis_Contig893.6.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=7674bp|location=Sequence derived from alignment at P-littoralis_Contig893:14665..22338+ (Pylaiella littoralis U1_48)
CTAATTTGGTGCATTGTCCGTGTGTTTTTGTTTACTACCGTCGTTCACAC
AGAGGCGCCAACAAGTGACTTGAAACAAGAACGGGTGAGCGTTGGGTTAT
GGTGTAGGGGAGGACACGCCTGCGGCGTGTGCATGCTCATTCAGCAAGTG
GCAGAGTCCTGCAGATCTATAGTTGCATGTACGTTGTAGCCTGCGAAGTT
TGCAACAGGAGCAGCACCAATCAGGCAAGTCTTTCTGATTTCACATTTTC
TCTCGGAGTACTACTGCAACACAGCTGGTGTTGTTTGCTAATGCACGAGC
TCCGCCTTTGTTAGCGCTGTGAGCCACCCCATGGCGTGAAGCTCTTCTTT
TGAAGCTCCCATCACAATCCCTGCGTCTTGTGTTGCTGATGTGGTGGTAT
GGAGTGGATAGTTGTTGCCGCGATTCTGGTGCGGTCGGCGGGTTAAAACT
GTACGTACGGAGTGTAACAATCTCCGTTTCCCCGCGGGCGCTGACTCTAA
TACTACTGATGTGTACTTCTACTCCTCTGCTGGTAAGCGTGTCTTCTTCA
AAAGGGCCTCAATTCAACTTGCGGAGCGGGTTCGCCAAACAAGTTTCTCA
CGTACAAAGTATACTGTGATCGTGACAAAATAGCTCTCTGTTCTCTCTCC
GTTTGCCCGTAAATGTTGTACAGACACCACGCAAGTCCCATGTCTTCGCC
TGCTGCATACGGCGAACGGGCGTCGTCAGCGCGTGTGCAGGGGGCTGAGC
AGCTCGGCGAGACGACGACAACAACACCAGCAGCAGCAGCACAGCAAGCA
CCACCGGCACCACCAGCACCACCGGCACCATCGGCACCAGCACTGGAGCC
ACCAGAGCCACCAGTGCTGTACCAAGACGCGCTGTTCCTCTTCATTGCCG
AAGGGAGGATACCTTCTCGGACAGAAATGCTGGTGTTCGCGCTGGGGTTT
GTTTCCATGGTGAGTGTCTCCAAGGAAGGGTGAGCAGTTTTCATCTTTGG
AACGGACCAAGGGGAGACTTTTGTCTCACGACCACTTCTGCTGTGCTACT
GCTGTTCAAGTAGATGTCCTGCAAGTATTAGTATTCACACAGCTGAACCG
GATGGCCGCACGTTGGAGCAGAACCCCCAGGTGACCATCATACAACCATT
TGGCCCACTATTGCGCGTAGATGGGCACTTGTAATTCCTCGAGTTGGACA
AGATTTTCCAAGTGGAAAATCAGGCCGGGTCCAACTTGCACTATCGCACA
GGAGTAGCAAGGGGAAAATCGGAAATTCTTGGAGCGATTGGAATTTAACG
GGGGGGTTGTCAGGTGGCAAGGAAGGCGGTTTGTGCTGATTTTTAAGCAT
CTAATGGTGCAAAGCGGCGAGCGTGATCGTCAGCACGGCCAGGATCGCTC
GTAAATGGAGTAGTGTACCTGCACGTGGCTTGTGTGTTTGTGTGCTCGTG
TGTGTATCTGTGCTTGGTGCGGGCTGTGAACCACTGCGGCGCAACCTCGT
GGCCGCGCGTGCGGCCGATTTTAAGGTGGAACTCCTGGCGTTTCGGGTTC
AAATCCATCGATGGATTTCAAGCGATAAGAATCCGTCGAATCAGATTTTT
TTTGCTGATTCCAAGTGAAGACAACCCCCGAAAGATGGGACTTTTTTCCA
ACATGGACTTTTTTCCAACATGGAATTTGGATTCTCATTACAGCAGTTCC
TCATGTGAATGAGACCCTTCGGTTCCAATGTTCGGAGCTAACACAAGAGC
GGGGCTTAGGTGAAGAGATGCACCGGTGTATCTCTTTGGCGTTTGTGATA
TGTTTACGGCCTGCTGTGTAGAACCAAATATTTTAAATATGATGAAGCAC
GTGTAATAAGTATGGAAATCGAACGCATTTCACACTACAAGAGAGGGGTG
CCTTCTCTCCTGCTGATTGTTCTCTTCTTCCTGGGCGACGGTTCAGCGGT
ACGGCAATGACCTGAAATATGCTGGTTGAAGAGGTGTCTACACCACACCA
CACCACACCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACGGGT
GCGCGGCGAAAAACTCATTCATCCCGCGAGCTATTTCATCCCCTCCCCAG
ACTGCTGCCGCTGCTGCCGCCGCCGCCGCCGCCGCCGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCCCATGTGGCAGTGTTTACTCAGCGCGCATCCATGG
GGCAGAGAAAGAGACAACATGCGTGTGAGGGATATTTCTTAAAAAACATA
AAGAATGCGTCACTGGCGGGTGGGTCTCTCAGGCGAGTTGTTCTTTCGTT
TCTTCTGCGAGAGAACAACGGCGTAATCATGAAACAAGGAAGAAGACAAA
CAGGAGGGGGGCTTTCTCGTTCTCCTTTTCTTGGTGCTGCGCTGCTGCTG
TACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTATGATTTGATTCGC
ACGTTTCAGCTCTCATCCTATCTCGGCTGCCCGCTCGCCGCATCGCTCGT
GTTACCCGCGATCATATCATACTGCTGTAGATATCTCTGGTCTTTATCAC
CAGCGATCTGATGAACTCGAAAGCCTTGAGGCCGTGGTACGTGCTCGTTT
TCATGGTCACCAGCAGCTACTTCGGAGTCCTCGTCTGGTCGCAGAGGGTG
GCCGTCGCCGAATATGCAGGTATGTGATACGATGATGCATATATACTACA
TGGAAGTTCGCTTCGAAGACGACACACCACGCTTTTGTGACATGACATGA
AACATTTGTGACGCAATCGCAACTGACAAGCAGAAGCACCATGTAGCCCT
GTTATCGATGCAGGTGGCGCATAATACATACCCCCCCCTCCCCCCGGCCT
GGAACCACTTGTGTGTCCCCTGATTTCTTCACTACGGGCGGGTAGGTGAC
ACAGACGTTGCAGCTTATACATGGGAAAAATGCCATTTTTTTTTTAATGC
AGACGAAATAAATGCTGGAATCACAACTCTCGGGGTTGTTCCGCGTCCAA
AATCGGTTTTCTTGCTACACCTCCGGCTGTTGTGTCGATCCAAAATCAAA
ATTATGCATACACTTTTTGAGCACTACACCAACCCACCTCCATCTCTGAA
GATTTCTGAGCGAGTATGGCCACGCTACGGAGGTGTAACATTGGCGTGAA
GTCATGTATATTTTTTCGAAGTGTTTTTACGATATTTGTGGAAGTGGCCT
CATCATTTCTAGGACCGCGAATTGCGCCGCTGCCGGGTACTAAATTTTTA
ACTTGATTTGGTTAATTTTAGGCAACTTTTGCAGGCCGGCATTGACCGCC
GTAGTACCGATCCCAAACTATGCAATCGCCAGATGTGTCCTACACCTATC
CACCCTCGCCCCTAGAGATTCCTGGACGATTTGAAACATTTTATGAAGGT
GTAACATAAGCGTGAAAGTGTCTCCCAAGAAGAGTAAAGTATCACATGAA
ACAGCAGCACACGGTTTGAATCCAGATGTGATGGCGCAGCATTTATCCCG
TTCAAAGCACAATCCAAGTATAATAACAGCTTGAGGGTGGAAGAGTATGG
CTTGCTTGAGGTGTCTCCCTACTTTCGCGGCGACCCCTGGTCTGTGCGAG
GAGTACGAGGTGTTGACCACAGGTGGGTTCAGCAGGGCAGCAGGGGTCAA
AATTTGAGAAGGGCTGGAAAAAAATATTTTCCCGCTCGAGCCAACACGCC
TCCGATCGTGTCTGTACTTTTTTCCTTTCTTATGGGCTGCAACACGTGTG
TGACCGATGCCTCTCTTGTTTTTATTTTTTTAGCAGAATTGGAGCATTAA
TCTTCGCCCAGAGCATTTTGGGCGCAAAAGCTGTGTCACACTCTTGCCGG
CGCCGATAACTTCTAGTCATCCGGAAAAACGCCTCGCACACTATACAAAC
AGTACTATTATACGATGGTGGCAGTACAATACGTAGCGGTAGCGCCTTTG
AGCTCACCAATCAAACCGTACACACCCAATCACATTGTCAACCTCCTTTA
CAGCAGTATTGGATGAGGGTGCTTGTTTTTTTGTGATGGTACTGCTTTAG
TGGTGTTTTGTTTCACGTTGTTTTGTTTTGTTTATCTCTGGGTCGTCTGC
TCTTAATTTGTCATGCAATCGAGTGGACAAAAACGTTGTACACGCCTTAT
GCTGCGGCAAGCGCGTGCGTTCCCGTAGGGCGGGAACTACAAACGGTATG
CTTCGTAGTGGATGCCATACACGCACACATCTAATTTTGATTCTCAATTT
GATACTCTGGACAATCCGTTTTTTTGTTTCGTTTTCGGTTTTGCGAAAAA
ATCAACATCAAAATCGAAAAACAAATTCAGCGGAGGAGGTAAGGTTGGCG
GCCGAGGCAAGAAGCCCCCCGTCCAGGATCATCGACAAGGAGACGAGGCG
CAGGTTGTTGGACTACTTCGTGTTCCGCCCGCCGGAAGAGGAGAAGAAAG
TAGAAACGAACAACGGCAGCAGCAGCTACAGCAGCACTGCTGTGGGAGGA
TTCAAGACAATGATGGCGAAAATCGACGGCCGTCTCTACAACGACGACGA
CGAAGAGCGAAGAAAGAGCGACACTCTGGGGAGCAGCGGGAGAGGGCTAA
GGTTTTCCCTCGGCAGCAGCCGAGGAGGCGGTAGCACCCCGGGCATCAAC
AGCAGCACAGGCAGCAGCGGGAGAATATTCGGAGGCGTGTTCTCCCTCCT
CCCTTCCCGCGCTGCTGCCAGCTCGTCCCCCGCTTCCCCTCCGGCGGAGG
CCACCACCCTACCTCTGCCCCCGGATGCTTCTTCGTTACCGCCGACTGGT
GCGGCAGGGGAGACTAACGCGGGCGACGGCAACGCTGAGGGACGCAGCTC
TGGCGATCCCGAGGTGATTGATTTTGATTCGATGAAGTTTTGATCATGGT
GGGGGAGAACGCAAGTAGGGTTGACTGTCAAATCATATGATGCGACGCTG
CTGCTTGTTATGTTCACCTCTTCATCGCGCTTTCCATCGTTTAGCCGCCC
GAAAGCCCCACCACCATCACCACCACCACGAATGAACCCTTGCGATGTTT
CGGAGACCGTTCCCTTTATTAGACAGGTCTACGAGTGATAATTTAATGCA
GTGGACGATGTGACTCCAATCCACTAGCATCTTCGTCGTCGATGTCCTTC
CTTCCTCAGTGACTGTGCAAAGACTGTGACTCGTTGGATTTGTGTTGTGC
GCGCACACACACACTAAATTTTCACGCAACGTTCGTCAAAATTTCATTTC
TCACACACACCGGTCGCTGTCATGTGCTATATACCAAGATTTGGACGTTG
TACGTAAATTATACTCCGAGTATATCCCAGAACTTGATACCAAGGGCATA
TGTACCAGTACACACTGGTGTAGTCGAGCAGCAGAAAGCGAAAATATTTT
TCATGTCTTGTTTCGTGAAATGCCCTGTGCTCGTCCGCTTGTGATACCTC
CCTACCGCCGTCTGTCTGTCCTTAGACCCGCCCCCCTGTCTGGTAGATGA
AGAAAACAACTGTGCTCCGTTACGGCATTGTACCAAAGGGATGCGCGGTC
TCTACAGCAGTATAGTCGCTGAGGCAGGTGAAACCCGAGTTTAGTCTTCC
CCCCCTCTAGCTCTGCAAACGCCCCGCCATTCTCGAACATCTTTTATTAC
CCCAACAAGAAAAACCACCCGTGTGTTTTCGAACTTGCGCGTAACTTTCA
GGAAGGAGGGTTGGCTGCTCTTCCCGCCGACAGCAGAAGAACAGGAAGAG
GCAGCGAAGATGAGCCTCGGGGACAGGCAGCAGCGGCAACAGTAGCAGCA
GCAGCAGCAGCAGCGTCGGCCACTGTTGCGAAGGATTCAAGCGAGGGGGG
GAGGGAAGGTTGCGGGTGCAGTCCAACGACCGGCAACGCGGAAGGTGGGT
CTTCTCGGCGATGGTAACTTCTGTGCCACAAACGGCAACTTAGTCACGTC
CATCCTGGTTGCTGTTGTTGTAGAGACGGAGTTGTATGATGGTCGGGCAG
ATATTGGGGGCGGGCCCGCGACGCTGCATTTCATCCTGTGCGATTTCATA
GATAGGCCCGCCGGATAGCTGTGGTGCTCATCTCTTGCATGTCCTCCGAA
GCCAGTACAGGGAGGAAGCTCTCGCCCGGTGCTTTCTAGTTTTGCATCCC
CCATACAACCCGTTTCGTCTCTGTGAGCGTTTGTGCTGAACTGAGTGGCA
CCTGATCTTCCGTGGGTTATGCCGCCGGTCTTTGCCTCAACTCCTTTGTG
AGACCGGTTGGTGTTTGGGGCTCTGAGAGCGTGCTGACGTTTGTGCAATG
GTTCCGATCCAAAACTGGTGCTGGCGGATTGGACTTGAAACGCGGCTCGA
CCGCGTTGGTTCGGCACTTGTACCGCCTCGTGTGGATGGATGCATGGGGC
CCGGTATTTGATGCTCTGTACAAGTGTGTATGTTGTCGAACACGTTTCAC
TCTCTCAACACCCCCCCCACCCCCCCCAACATAAAAAAAACGTGCCGTGA
GTTTTAAATCAAAGAAAATAAAAATCAGAAAAAGCAGTAACAATACAGGT
GAACAAACCCAGACAACAAGACTTATATTTTTATGCACCCTGGGTGAATG
ATGTATGTTTTTTTGTGTTTTTACCTGTGAGTAGCTACGGGCGGCGACAA
GGCAGGTGGGGAGTGGTCAACGGCCGAGTCGTGCATCGTCTGCTTCGGCG
ACTACGCTTACGGCGACGAGCTGTGCCGGTTGCCCTGCCGGCACCTCTAC
CACGCGACGGTATGTATACGATAGGGGCAGTCCGCGTCCGATCGTTCATG
TATGTTTGTTTATGTTGTTGTAGAATTTATGCGTTTGTTTTTTCGTCGGC
CCGGTGGGCGCGTGTTCGAGCTCCGTGTCGTCCGCGCGCGTTTCAGTGCT
GCATACCATCGTACAACGACAACCAACAGATACAATCTGCTCCAGTCAAG
TATGTTGCTGCAAAAACTACGTGCGGCATTCAATAAATAAAGAGGTGTAC
TCGTGACCCCGGCTGATGCACCCACACCATACCGAAAGGTGTACAGTAGA
CTGGTGCCTAGAATAAACGGGATGACACGACACGCACACACTCGCGTGGC
TGTTTTTTGTCTCTTTATTTTTTTTTCTACGAGGGGGGGGCTTTTTTACG
CGCAATATCTTCTTACCGAACACTATATACAAGTAATTGTGCTTGTTCTT
GCTCGTAAAATATGATGGACATTATTCTCCGACAAAAATCAGACGTCTCG
ACCGAGGCTGACGCCGCTCCACCGCCCAGTGGTTTTCGGCCAATCAGAAT
TCAGCACCGTCGGTGTTGACCAATAGGAAGACTGCGGGCACTTGATGTCT
TTCTCCCACGCCGTGCGTGCAAGGCATTCACTTTTTGTGGAGATCACGTG
ATGGCACTAGCTTGTGTGGTACCGTCGTTCTGTACCTGTTGCTGGTGCTA
AAGAAACTGATATTTTCTGCGTCCGTTTTGCTTTACCAACCGCTCGTGCA
ATCAAGATGCATTCATAGTTACTGCTTCATGCGCTGTGCTGTACTTTTCT
GGGACCAAAGTGCATCGACGAGTGGCTCGACGGAGCAAATCACTCCTGGT
GCCCCCTGTGCAAGACGGACGTCGTTGCCGGAGCCGCTCCGGCACGCCCA
GCTAACAGCAACAACACGAGCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig893:14665..22338+

>mRNA_P-littoralis_Contig893.6.3 ID=mRNA_P-littoralis_Contig893.6.3|Name=mRNA_P-littoralis_Contig893.6.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1374bp|location=Sequence derived from alignment at P-littoralis_Contig893:14665..22338+ (Pylaiella littoralis U1_48)
ATGTCTTCGCCTGCTGCATACGGCGAACGGGCGTCGTCAGCGCGTGTGCA
GGGGGCTGAGCAGCTCGGCGAGACGACGACAACAACACCAGCAGCAGCAG
CACAGCAAGCACCACCGGCACCACCAGCACCACCGGCACCATCGGCACCA
GCACTGGAGCCACCAGAGCCACCAGTGCTGTACCAAGACGCGCTGTTCCT
CTTCATTGCCGAAGGGAGGATACCTTCTCGGACAGAAATGCTGGTGTTCG
CGCTGGGGTTTGTTTCCATGATATCTCTGGTCTTTATCACCAGCGATCTG
ATGAACTCGAAAGCCTTGAGGCCGTGGTACGTGCTCGTTTTCATGGTCAC
CAGCAGCTACTTCGGAGTCCTCGTCTGGTCGCAGAGGGTGGCCGTCGCCG
AATATGCAGCGGAGGAGGTAAGGTTGGCGGCCGAGGCAAGAAGCCCCCCG
TCCAGGATCATCGACAAGGAGACGAGGCGCAGGTTGTTGGACTACTTCGT
GTTCCGCCCGCCGGAAGAGGAGAAGAAAGTAGAAACGAACAACGGCAGCA
GCAGCTACAGCAGCACTGCTGTGGGAGGATTCAAGACAATGATGGCGAAA
ATCGACGGCCGTCTCTACAACGACGACGACGAAGAGCGAAGAAAGAGCGA
CACTCTGGGGAGCAGCGGGAGAGGGCTAAGGTTTTCCCTCGGCAGCAGCC
GAGGAGGCGGTAGCACCCCGGGCATCAACAGCAGCACAGGCAGCAGCGGG
AGAATATTCGGAGGCGTGTTCTCCCTCCTCCCTTCCCGCGCTGCTGCCAG
CTCGTCCCCCGCTTCCCCTCCGGCGGAGGCCACCACCCTACCTCTGCCCC
CGGATGCTTCTTCGTTACCGCCGACTGGTGCGGCAGGGGAGACTAACGCG
GGCGACGGCAACGCTGAGGGACGCAGCTCTGGCGATCCCGAGGAAGGAGG
GTTGGCTGCTCTTCCCGCCGACAGCAGAAGAACAGGAAGAGGCAGCGAAG
ATGAGCCTCGGGGACAGGCAGCAGCGGCAACAGTAGCAGCAGCAGCAGCA
GCAGCGTCGGCCACTGTTGCGAAGGATTCAAGCGAGGGGGGGAGGGAAGG
TTGCGGGTGCAGTCCAACGACCGGCAACGCGGAAGCTACGGGCGGCGACA
AGGCAGGTGGGGAGTGGTCAACGGCCGAGTCGTGCATCGTCTGCTTCGGC
GACTACGCTTACGGCGACGAGCTGTGCCGGTTGCCCTGCCGGCACCTCTA
CCACGCGACGTGCATCGACGAGTGGCTCGACGGAGCAAATCACTCCTGGT
GCCCCCTGTGCAAGACGGACGTCGTTGCCGGAGCCGCTCCGGCACGCCCA
GCTAACAGCAACAACACGAGCTAG
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