mRNA_P-littoralis_Contig892.9.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig892.9.1
Unique NamemRNA_P-littoralis_Contig892.9.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 3.220e-138
Identity = 256/470 (54.47%), Postives = 307/470 (65.32%), Query Frame = 1
Query:    1 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAKADDMKAMLVSCTTQAVTGRYVLADLDIVMTIVPKPPPKVATVPNGTPAQKSW----RRASPGDGRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWL---------------SLARMVHENIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGFQDL 1353
            M  D+SD+AAEAAR+AL +GST+ D VS   DLGEELPVIKPV KTLK IR  VETVK NRE+L +LE RCTY+ AC +VKCR   S  +DV PL DCVE A+ F ERC SRR +VS  +KA SD  EIAGLN+ VDRLT DL LAG+AVL  K DDMK  L                +D  +  +P+   K+A VP G P +KSW    R A         G+DR    A  G       G+      +   ++  E F+DG+VWL                LARMVHE IGGS+GR P A++D A YIK+R+E GH G+ LKCLVVADNVWE++VVSKL+ETGM VLLSTRDE ++  S GKAV VD LS+ DAESVL+R AELP E RLPDDAVDLI+LCG VAMD+AFVGRWSTVRGRHD A+WS AA  IR E+  V  D  + +  +   KRR+A+L  GF+DL
Sbjct:    1 MVADISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESE-VDVAPLKDCVEAAKNFAERC-SRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTL--------------DRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGS---GKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDL 451          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 1.360e-131
Identity = 245/482 (50.83%), Postives = 311/482 (64.52%), Query Frame = 1
Query:    1 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPV-------IKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAKADDMKAMLVSC-TTQAVTGRYVLADLDIVMTIVPKPPPKVATVPNGTPAQKSWRRASPGDGRCA*GTDRRWGA--AFGGTFWC*RFGQDHSRG*VCAKSKAL------ETFADGVVWLS---------------LARMVHENIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGFQDL 1353
            MA   S AAAE  ++ L MGS  VD ++FM +LGE+LP        ++PVLKTL  IRE VE V+ N+E+L++L  RC YL ACV+VK RQ   S MD+TP+ +C+E A + VERCG R  +++  + ASSD  EIA + A +  L  DL LAGVA+L  K  D+ AM+    T QA T   +LA+ + ++  + K P K+A +P  TP +KSW              +R + A  A GG       G D   G   A S+ +      + F+DGVVWL+               LA M+ E +GG   RRP  +DDGAAYIKE+++ GHGGKGLKCLVVADNVWEKEVV KLLETGM VLLSTRDE L+ GS G+ VGVD +S+ +AESVLR+ +ELPPE RLPDDAVDLIELCG VAMDLAFVGRWSTVRGR D+ AWS AA K+R E+G + G+  SG V ++   RR+AVL AGF+DL
Sbjct:    1 MAAKSSGAAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRG-KMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVER------LYVMERVFEALTAVGGPHLVGLVG-DSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGG---RRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDL 471          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 2.050e-129
Identity = 244/487 (50.10%), Postives = 303/487 (62.22%), Query Frame = 1
Query:    1 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAK---ADDMKAMLVSCTTQAVTGRY-------VLADLDIVMTIVPKPPPKVATVPNGTPAQKSWR-----------RASPGDGRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWL---------------SLARMVHENIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGFQDL 1353
            MA  ++DA  E A++A  MGS   DV+ F+ DLGEELP+++PVL+TL+ IREKVETVK+N EDL  L  RCTY+ AC IVKCR   +  +DV PL DCV    KFVER   +R ++S  +KA  D G+I  L  R+  L GDL LAG+A L AK   AD      V+   Q   G+        +LA  + ++  +PKPP KVA VP GTP  KSW            +A   DG          G    G       G+  +   + +     ETF+DG+VWL                LA+MV E+IGGS+GRRP  +DDG AY+K+++ENGHGGKGLKCLVVADNVWE +VVS+LLETGM +LLSTRDE L+  ++G+ VGVD LS+ +AESVLRR AEL PE RLPDDA DLIELCG VAMDLAFVGRWSTVRGR D+ AWS AA K+R E+      + S    DS   RR A+L AGF+DL
Sbjct:    1 MAAYVADATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTE-LDVAPLEDCVNAVEKFVERY-RKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASL-AKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADG----------GPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDL 474          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 2.400e-119
Identity = 226/460 (49.13%), Postives = 290/460 (63.04%), Query Frame = 1
Query:   58 GSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAKADDMKAMLVSCTT-QAVTGRYVLADLDIVMTIVPKPPPKVATVPNGTPAQKSW---RR--------ASPGDGRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWLS---------------LARMVHENIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAV-GVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGFQDL 1353
            G+   DV++F+ +  + LP+I+PVLKTLK +               +L  RCTY+  CVIV+CR+  SSG+  TPL++CV     FVERC SRR  +S  +KA+ D  EIAGL  R++ L GDLRLAG+A +  K +D+KA+L    T QA++    LA+ DI+   V   P  +ATVP GTPA+KSW   RR        A PG+G          G    G       G+  +   +   ++  E F+DG+VWLS               LAR+V E+IGGS+GRRP   DDGAAY ++R+++GHGGKGLKCLVVADNVWE+ V+SKLLETGM VLLSTRDE L+  + G  V GVD LS+ DA SVLRR +EL PE+RLPD+AV+L+ELCG VAMD+AFVGRWSTVRGR D+ AWS AA K+R +I        S NV D    RR+AVL AGF+DL
Sbjct:    6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKG-SSGLKATPLMECVNAVGAFVERC-SRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEG----------GPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIER---SRVSDNVWDIRAVRRKAVLQAGFEDL 450          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 2.060e-104
Identity = 214/463 (46.22%), Postives = 274/463 (59.18%), Query Frame = 1
Query:    1 MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAKADDMKAMLVSCTT-QAVTGRYVLADLDIVMTIVPKPPPKVATVPNGTPAQKSW---------RRASPGDGRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGV--VWLSLARMVHENIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGFQDL 1353
            MA + S AAAE  ++AL MGS  VD ++F+ DL E+LP                    +N+E+L++L  RC +L  CVIVK RQ   S MDV+P+ +C+E A + VERCG R  +++  + ASSD  +IA + A +  L  +L LAGVA+L  K  D++A +      QA T   +LA+ +I+   + K P K A +P  TP  KSW         R   P               A GG       G D   G   A S+ + +  D +  + L LA MV+E IGG   RRP  +DDG AYIKER+  GHGG+GLKCL V DNVWEKEVV +LLE GM VLLSTRDE L+ G  G+ V V+ LS+ +AESVLR+ AELPPE RLPDDAVDLIELCG VAMDLAF GR STVRGR D+ AWS AA K+R E+     +   G V ++   RR+AV+ AGF DL
Sbjct:    1 MAAESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRG-KMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPL-------------TADGGPPLVGLVG-DSGSGKTTAASEIVRSNEDRLPSLMLQLAHMVYEEIGG---RRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDL 426          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 2.040e-94
Identity = 190/419 (45.35%), Postives = 236/419 (56.32%), Query Frame = 1
Query:  148 IREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQ-QPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAKADDMKAMLVSCTTQAVTGRYVLADLDIVMTIVPKPPPKVATVPNGTPAQKSWRRASPGDGRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWLS---------------LARMVHENIGGSMGRRPVAADDGA-AYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGFQDL 1353
            +RE VETV + R++L +LE RCTY+ AC+I K R   P S  +V+PL DCV +A KFVER                                             K   M+ M+     QA   + +LA+ +I++  +PKPP K A VP GTP +KSW                  G    G       G+  +   +   +   E+F+DG+VWL+               LARMV E+IGG +G  P  +   A AYIK+R+ENGHGGKGLKCL VADNVWEKEVVS LL+TGM+VLLSTR E L+ G+ G  V +D LS  DAESVLR  AELPP VRLPDDAVDLI+LCG VAMDLAFVGRWSTVRGRHD+ AWS AA K+R EI  + GD     V  +   RR+A+L AG +DL
Sbjct:    1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVER--------------------------------------------RKKRTMEQMV---QNQAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERHVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDI---VDGARGNRRKAILQAGLEDL 369          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 6.330e-79
Identity = 195/494 (39.47%), Postives = 248/494 (50.20%), Query Frame = 1
Query:   16 SDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAKADDMKAMLVSCTTQAVTGRYVLADLDIVMTIVPKPPPKVATVPNGTPAQKSWR---------------------------RASPGDGRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWL-----------------SLARMVHENIGGSMGRRPVAADDG--AAYIKERIENGHGGKGLK-CLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVG-DSSKKRREAVLSAGFQDL 1353
            S A  EAARV L MGST  D+V F  +LG E+PV+  VLKTLK IR + E V+ N E L++LE RCTY+ ACVIVK RQ  SS M+V PL  CV  A  F+ RC SRR       KASSD  E+  LN+RVD LTGDL LAG+A L+AK DD+KAML     Q      V                 VA VPNG P + SW                            R+  G   CA        A+  G     R   +     +   ++  E F DGVVWL                  LA+ V E++  S G  P A+  G  +A+I + +       G K CLVVAD+VWE +++ +L  TGM VL ++RD  L+    G  V VD LSK +AE +LR  AEL     LP  A  +IE C  +A  L FVGRWSTV+G  D+  W+ A   I  E+  + G++ +     D S  +R A+L AGF DL
Sbjct:   49 SGAPEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARC-SRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASV----------------PVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCA--------ASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDL 517          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 6.920e-73
Identity = 147/281 (52.31%), Postives = 183/281 (65.12%), Query Frame = 1
Query:  574 KVATVPNGTPAQKSW--RRASPGD----GRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWLS---------------LARMVHENIGGSMGRRPVAADDGAAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGDSSKKRREAVLSAGFQDL 1353
            K+  VP GTPA+KSW  +R    D    G  + G  R  G   G          +  R      ++  E F+DG+ WLS               LAR+V+E+IG S+GRRP ++DD AAYI++R++ G GGK LKCLVVADNVWEKEVVSKLLETGM VLLSTR+  L+  + G+ VGVD LS+ DA SVLRR AELPP+ ++P DAVDLIELCG VAMDLAFVGRWSTVRGR D+ AWS A  K+REE+G V     S  + ++   RR+A+L AGF+DL
Sbjct:   32 KLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVR-----STEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDL 307          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 3.310e-62
Identity = 147/319 (46.08%), Postives = 193/319 (60.50%), Query Frame = 1
Query:    1 MATDMSDAAAEAARVALTMGSTVVDVVSFM--GDLGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQ--QPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVLNAKADDMKAMLVS--CTTQAVTGRYVLADLDIVMTIVPKPPPKVATVPNGTPAQKSWR--RASPGDGRCA*GTDRRWGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWLS---------------LARMVHENIGGSMGRRPVAADDGA-AYIKERI 885
            M T +SDAA EAA +AL MGST VD++SF+  GD G ELPV+  VLKTL  +RE VETV++NR++L +LE RCTY+ A VIVK RQ  QP SG+DVTPL DCV  A KF ERC  RR +    +KA S   E+A LNAR+DRL GDL LAG+A +  +  D+K M++    + QA   + +LA+ +IV+  +PKPP K A +P GTP +KSW   R    D      T    G    G       G+  +   +   +   E+F+DG+VWL+               LARMVHE+IGG +G RP  + D A AYIK+R+
Sbjct:    1 MVTTLSDAAVEAANLALKMGSTAVDMISFVHRGD-GGELPVVGTVLKTLTAMRETVETVQQNRDELAALEKRCTYMTASVIVKFRQIPQPGSGLDVTPLKDCVVVAEKFAERCKKRRMRWE-IVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTGEA-GPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKRLPSLMLQLARMVHEDIGGCVGGRPNESGDNADAYIKQRM 316          
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.090e-42
Identity = 146/473 (30.87%), Postives = 221/473 (46.72%), Query Frame = 1
Query:   97 LGEELPVIKPVLKTLKFIREKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVEDARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAVL-------NAKADDMK------------------AMLVSCTTQAVTG-RYVLADLDIVMTIVPKPPPKVATVPNGT--PAQKSWRRASPGDGRCA*GTDRR---WGAAFGGTFWC*RFGQDHSRG*VCAKSKALETFADGVVWLS-----------------LARMVHENIGGSMGRRP---VAADDG--AAYIKERIENGHGGKGLKCLVVADNVWEKEVVSKLLETGMSVLLSTRDEGLIPGSSGKAVGVDYLSKTDAESVLRRTAELPPEVRLPDDAVDLIELCGHVAMDLAFVGRWSTVRGRHDQAAWSHAARKIREEIGNVCGDSFSGNVGD-SSKKRREAVLSAGFQDL 1353
            +G+E+  ++PV   L  +++  + +++N + L  L   C  +   V+VKC     + +DVTPL +CV+D    V    SRR   S F    S+V  I  L  R++ L   + LA   V+       NA  +D++                   ML  CT     G + VL  L       P+     A  P G   P     RR      R     D     W  A  G       G+  +   +       E F DG+VW+                  LA  VHE++   +G  P   VAA +G  AAYIK R+E G+ G+GLKCLVVAD+VWE EV+  L ++GM  L+++RD  L   S GKAV +D++++ +   +L++ A+L      P++A  +++LC +VAM+L FVGR S +R + D   W  A  +IR EIG    D   G+  D ++ KRR+ +   G++D 
Sbjct:    1 MGKEIGFLQPVCAALGRMKDSWDEIQRNEDRLAELYELCEVITCFVVVKC-DGGRNNIDVTPLSECVDDLEALVADY-SRRGLCSKFCNPDSEV--IEQLGKRIENLVHVMELAATVVVSEQVGGVNAAVEDLRRQLEINWARNECLLAKHETMLEECTKNIERGIKSVLQQLP-----APQAERDQAPEPKGVWKPEDHVIRRHVVA--RVCEYFDSANSPWMVALVGRSGA---GKTSTASEMALHYHLRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKLGISPSAAVAAAEGTAAAYIKTRMEQGNAGRGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEIRSEIGAEVSDP-GGDFDDWAASKRRDVIFRVGYKDF 458          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig892.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW8_ECTSI3.220e-13854.47NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZY7_ECTSI1.360e-13150.83NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE2.050e-12950.10NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KLK9_9PHAE2.400e-11949.13NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE2.060e-10446.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J759_9PHAE2.040e-9445.35NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LFN6_ECTSI6.330e-7939.47NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE6.920e-7352.31NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7G5K4_ECTSI3.310e-6246.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU40_9PHAE1.090e-4230.87NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig892contigP-littoralis_Contig892:102796..104979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZW8
PFAMsNB-ARC,TPR_10,TPR_12,TPR_16,TPR_4,TPR_7,TPR_8
Model size1355
Max annot lvl2759|Eukaryota
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.15e-53
EggNOG OGsCOG0457@1|root,KOG1840@2759|Eukaryota
Descriptiondetermination of stomach left/right asymmetry
Cds size654
COG categoryC
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791781.9325988-CDS-P-littoralis_Contig892:102795..1033261680791781.9325988-CDS-P-littoralis_Contig892:102795..103326Pylaiella littoralis U1_48CDSP-littoralis_Contig892 102796..103326 +
1680791781.9443965-CDS-P-littoralis_Contig892:104111..1042341680791781.9443965-CDS-P-littoralis_Contig892:104111..104234Pylaiella littoralis U1_48CDSP-littoralis_Contig892 104112..104234 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791781.959026-UTR-P-littoralis_Contig892:104234..1043721680791781.959026-UTR-P-littoralis_Contig892:104234..104372Pylaiella littoralis U1_48UTRP-littoralis_Contig892 104235..104372 +
1680791781.974273-UTR-P-littoralis_Contig892:104416..1049791680791781.974273-UTR-P-littoralis_Contig892:104416..104979Pylaiella littoralis U1_48UTRP-littoralis_Contig892 104417..104979 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig892.9.1prot_P-littoralis_Contig892.9.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig892 102796..104234 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig892.9.1

>prot_P-littoralis_Contig892.9.1 ID=prot_P-littoralis_Contig892.9.1|Name=mRNA_P-littoralis_Contig892.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp
MATDMSDAAAEAARVALTMGSTVVDVVSFMGDLGEELPVIKPVLKTLKFI
REKVETVKKNREDLRSLEGRCTYLAACVIVKCRQQPSSGMDVTPLVDCVE
DARKFVERCGSRRHQVSNFMKASSDVGEIAGLNARVDRLTGDLRLAGVAV
LNAKADDMKAMLVSCTTQAVTGRYVLADLDIVMTIVPKPPPKVATVPNGT
PAQKSWRRASPGDGRCA*
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mRNA from alignment at P-littoralis_Contig892:102796..104979+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig892.9.1 ID=mRNA_P-littoralis_Contig892.9.1|Name=mRNA_P-littoralis_Contig892.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2184bp|location=Sequence derived from alignment at P-littoralis_Contig892:102796..104979+ (Pylaiella littoralis U1_48)
ATGGCCACCGACATGAGCGATGCTGCAGCGGAGGCTGCCAGGGTCGCCCT GACGATGGGGTCGACCGTGGTGGACGTGGTATCTTTCATGGGGGACTTGG GTGAGGAGCTACCGGTGATTAAGCCGGTCTTGAAGACGCTCAAGTTCATT CGTGAAAAAGTGGAGACAGTAAAAAAGAACCGGGAGGACCTACGGAGCCT CGAAGGAAGGTGCACTTACCTCGCGGCATGCGTCATCGTGAAGTGTAGGC AACAGCCCAGCTCGGGGATGGATGTGACTCCACTCGTGGACTGCGTTGAG GATGCACGGAAGTTTGTGGAGCGCTGTGGTAGCCGGCGACACCAGGTGTC GAATTTCATGAAGGCCTCCAGCGACGTAGGCGAGATTGCTGGATTGAACG CACGTGTGGACCGTTTGACGGGGGACTTGAGATTGGCAGGCGTTGCCGTT CTGAACGCAAAGGCCGACGACATGAAGGCAATGCTGGTGAGTTGCACGAC GCAGGCTGTGACTGGCCGCTATGTCCTAGCCGTACAGCACAGGCAGTATT GTAATCTGAAATATGTACAGCAGCTCGTTTGCTCTGCATAGATGAGATTT AAGTTGCGAAGACCTCTGGCCCCGTTAAACACGGAGTCGCATGTAGTTGG ATGGTGATGTACAGTTGGGGTGCTCAAACACAAATGTTTCTAACTACTCA GCGCGAGGCAGGAGATAATCGTTCCTGACAAATGTCTCGGCATTCAACAT TGGTCAATTAGCTGAGCGACAAGGATAGCGTAGTCACGGATCTTCTCAAA TTGATAAATGCCCAAAAACGTGTTTTACAGGGTTTCCTCTCTTTGCTTTT GGTGAGTTCAATTTGCTGCTGGAAATGGCGTCATAGCCAAGCTGGAAGGC CTTTGACTTCCTATTGCACGCCCCTTCGATGTAAAACATCATCAACCGCC GCCCCTTCACTCCTCTACTCTTTGTCGATCGAATTTGTTTTTTGGGTAGG GTTCCTCCCGCAGTGCGACATCTTGGCGCGACTGTCAAAGTTTCGTGAAC GTCCGTTGCCAAATGCTCAGCATGTTGCTACTCGCATGTTTTCCCTTTTC CATCTCACGTAGCAGCGTGGTCGTGGGCGGTTGCATGTGCTCGTACATTC AGACGAAAGCTCGTTGCCCTCAGCTCGCCTGCCGTGATATGGATGTTCCC TTTACAGCTGCGGTGGTGTTGGTGTTTTCTGTACGACGACTTCTTGCCCG GTGTTTTAACACGCACGTTCTTGCCATTCTTCCGCGACGTTTCTGTTCCA GGAGGGTATCAGCAAGGACCTAGACATCGTGATGACCATTGTACCAAAGC CGCCGCCCAAGGTAGCCACGGTTCCCAATGGTACGCCGGCACAAAAGAGC TGGCGTCGAGCGTCGCCAGGTGATGGGCGCTGTGCTTGAGGCACTGACAG GCGGTGGGGGGCCGCGTTTGGCGGGACTTTTTGGTGCTAGCGGTTCGGGC AAGACCACAGCCGCGGCTGAGTTTGTGCGAAGTCAAAGGCGCTCGAAACT TTCGCCGACGGTGTCGTGTGGTTATCGGTCAACCAAGGTGCCAAGGAGCG CCTCCGTCTTTGATGCTCCAGCTAGCCCGTATGGTGCATGAAAATATCGG CGGCAGTATGGGCCGTCGCCCGGTGGCAGCCGACGACGGTGCTGCGTACA TCAAAGAGCGCATCGAGAACGGGCACGGGGGCAAGGGATTGAAGTGTCTC GTGGTGGCCGACAACGTGTGGGAAAAGGAGGTGGTCTCGAAGCTCCTGGA GACTGGCATGTCCGTTCTCCTATCGACCCGCGACGAAGGGTTGATACCGG GCTCATCGGGCAAGGCCGTGGGCGTGGACTACCTTTCCAAGACAGATGCA GAGTCGGTGCTGAGGAGAACAGCAGAGCTACCTCCTGAGGTGCGGTTGCC CGACGATGCCGTTGACTTGATCGAGCtgTGTGGTCACGTGGCGATGGACC TTGCATTCGTGGGGCGGTGGAGCACCGTTCGCGGCAGGCACGACCAGGCG GCTTGGTCTCATGCGGCTCGGAAAATTCGCGAAGAGATTGGCAACGTTTG TGGTGACTCCTTCAGCGGCAACGTGGGTGATTCGAGCAAGAAACGCCGTG AGGCCGTTCTTAGTGCCGGCTTCCAGGACCTAGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig892:102796..104979+

>mRNA_P-littoralis_Contig892.9.1 ID=mRNA_P-littoralis_Contig892.9.1|Name=mRNA_P-littoralis_Contig892.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=654bp|location=Sequence derived from alignment at P-littoralis_Contig892:102796..104979+ (Pylaiella littoralis U1_48)
ATGGCCACCGACATGAGCGATGCTGCAGCGGAGGCTGCCAGGGTCGCCCT
GACGATGGGGTCGACCGTGGTGGACGTGGTATCTTTCATGGGGGACTTGG
GTGAGGAGCTACCGGTGATTAAGCCGGTCTTGAAGACGCTCAAGTTCATT
CGTGAAAAAGTGGAGACAGTAAAAAAGAACCGGGAGGACCTACGGAGCCT
CGAAGGAAGGTGCACTTACCTCGCGGCATGCGTCATCGTGAAGTGTAGGC
AACAGCCCAGCTCGGGGATGGATGTGACTCCACTCGTGGACTGCGTTGAG
GATGCACGGAAGTTTGTGGAGCGCTGTGGTAGCCGGCGACACCAGGTGTC
GAATTTCATGAAGGCCTCCAGCGACGTAGGCGAGATTGCTGGATTGAACG
CACGTGTGGACCGTTTGACGGGGGACTTGAGATTGGCAGGCGTTGCCGTT
CTGAACGCAAAGGCCGACGACATGAAGGCAATGCTGGTGAGTTGCACGAC
GCAGGCTGTGACTGGCCGCTATGTCCTAGCCGACCTAGACATCGTGATGA
CCATTGTACCAAAGCCGCCGCCCAAGGTAGCCACGGTTCCCAATGGTACG
CCGGCACAAAAGAGCTGGCGTCGAGCGTCGCCAGGTGATGGGCGCTGTGC
TTGA
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