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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 367 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-06_009290.1 |
| Cds size | 366 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791779.5770214-CDS-P-littoralis_Contig89:571202..571252 | 1680791779.5770214-CDS-P-littoralis_Contig89:571202..571252 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig89 571203..571252 + |
| 1680791779.58875-CDS-P-littoralis_Contig89:572338..572435 | 1680791779.58875-CDS-P-littoralis_Contig89:572338..572435 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig89 572339..572435 + |
| 1680791779.6090064-CDS-P-littoralis_Contig89:573099..573203 | 1680791779.6090064-CDS-P-littoralis_Contig89:573099..573203 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig89 573100..573203 + |
| 1680791779.6207576-CDS-P-littoralis_Contig89:573614..573729 | 1680791779.6207576-CDS-P-littoralis_Contig89:573614..573729 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig89 573615..573729 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig89.107.1 >prot_P-littoralis_Contig89.107.1 ID=prot_P-littoralis_Contig89.107.1|Name=mRNA_P-littoralis_Contig89.107.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp
RRAVQEKENAKSEAVERADLIHSALQIEVKKNREAARGRDRELADLKKQV
VRTSRSLALSEAERIAERNSLYSKIDKLNEEARRLGVQTEASKNLAARTV
TRVSNGAFLNASQASKALAPKG back to topmRNA from alignment at P-littoralis_Contig89:571203..573730+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig89.107.1 ID=mRNA_P-littoralis_Contig89.107.1|Name=mRNA_P-littoralis_Contig89.107.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2528bp|location=Sequence derived from alignment at P-littoralis_Contig89:571203..573730+ (Pylaiella littoralis U1_48)
CGGAGGGCGGTCCAAGAGAAAGAAAACGCGAAATCCGAGGCGGTCGAGAG
GTACGAGCTTTTTCGTGCATACGCTGCCGTGTCAATAGTTGTGACGAGAT
GCGACGTAGATAGGCGCCGGTTCATCGTCGAGCTTTACTTAATATTTAAC
GTCGATCAGGTCATACAAGACACTTCCTTCTCTACTGAAACATACGGTAC
AACTGTGCTTTGAGTCGGCCCCCTGAGAAACGAACAGCAGCAGCGCATCG
ATTCGCAATAAATAAGAAATAACTTGTGTTGCCCTTCGGACGGAAGAGGG
CAACTTTCCTACCAATAAGCGTATTCTTCTCGCTTTCCTGTGTTAGGTAC
CTAGCTAGTACTTTGTGGCCCTCAATGATGGGCGTGGCTCGGTACGTGTG
CGTCTTTGGCGATTGCGTGGAAAAGACGCCTGTGAAATCCGCTGCCAACC
CCCCCCTCCTTCGAGGGCAACTCAGCCGAGAAAACGGCATGCCTAGCGCT
CACACAATAACTGTACTCACACATAGCCACTGTCTCTATTTGGTCCATCT
CTATGTATGCATCTGTCTCATCGTTCCAATCTGGTGGAGTTGGAGGATTT
AAAGGTAATGCCTAAATGCTCTCCATCCACCTGGTGCTACTTTGGTGGCT
ATGTGCACATAATGTTCTGCAGGTATTCGGCAAGGGTGGGTGGTGATAAT
TTAATCGGTTTGACCTCGTCTTCAGAACCTGGCACAAAATCAAGCAACAA
TACGGTGTTCATGTTATTCTTGATCATTGGACTTCACTACAATCTGTTCG
CTTACAACACTTATAGGCGCGAGCTTTACACCACAGAAAACTCATGCAAT
GCCGCAGTTCGTCGTGGTGGATCACGTGTACCCGTTATATATGACATGAC
CATATTACTTTCGTCGGAACGCTGCATGCAGTGGAGCCGCAGAGAGGACG
CGGCGTGCCGAGGTTTGGCTGAATGGTCGACAACTAACAGAAGAAAAGGG
TTAAACGTGATAACGTTTAACGTTGTGTGGCCGACAGCAGAAGAAAACAA
GTTGAACGGAAAAGTTAACGCCAACAATACCTCACTCTTTGTTTTTCATT
TGCCCCGATAACACACAAAACTATGTGGTATCTCAGGGCGGACCTTATTC
ACTCAGCGCTCCAAATCGAGGTGAAGAAGAATAGGGAAGCGGCGAGGGGG
CGGGATCGCGAGCTGGCGGACCTAAAAAAGCAGGTACGAACGACGTGCTC
CTGAAAACAAAAGGCTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTC
CTTCTTCTCCTTATTTTCCTTCAGTATCTTGGTCGTCGTCGTTTCCTTCT
CTTTCTGCCTTCTTCCCGAACCAAATGCTGTCTGCCGTTCGTCTGTGTTT
GGTTCCATTTCCTCCATCATTGATAGTGTTGTGTTTCACGGCACACATTG
GTATTCGATGATTTCTGTACACAGGAAGGAACCAACAAACGTGCATGAAT
GAAGTATTATACCGCTCAGATATACTCCGTGTGTTAGGCGGGCGGCATCA
TAGAGCGAATTCGAGTAAGCATGAAGTTGTGTTATTCTCACTCACTCGGA
GTGTATGCAAGTGTTCGAAAGGCGCGATGATACCACACAGCAAGGCAAAC
GAGTCATTGCCATTGCTTTCACAGGTTTTCCGCGCGCGTCGTTGCACAAG
AGATATCCAGGGACGAGAAATATGTATACGAACGTCAGTGGTCAGACTGC
TCGGCAGACAGACAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGCCCTACAATACAGTCAAACTCGACTCTTTCGCATTTGGCTCCAGGTC
GTCCGTACTAGCCGGAGCCTGGCCCTTTCCGAAGCGGAGAGGATAGCCGA
GAGAAACAGCCTGTACAGCAAGATCGACAAACTGAACGAAGAAGCTCGCA
GGTGAGAACAAATTGGGAGGGGGGGAGGTGGTATCTAAAATTGTGCCGAC
GGCTGATGGAAACTCCTGATGATGTCCATTCTTTCAGGGGCTGTCACTCA
CGTATTGCCTGGGGAAGGGGGTACTTCGCCCGAAAGGTTACAGCAGTCCT
GCAAAACTACGTAAGTCTAATCTCTACAAGCCGAAAGAGGGGAGGTTGAC
CGAGACACCCAAGTGCACCACAGGTAGGAATGCCCCCCGCCCCCAGTCCC
CGGTATCTACCCTTTATTTTTTCATTCAAACAAGCATGGTGCTGTCGCAG
CCGCTGCAGCAGCGGCAGCAGCAGTATTGTGGCGAATGAAAGTATTTCAT
AGCGAAGGCTTGTCGCCATACGCCCTCCTCTGCCGCCCCCCCTTCAATTC
CCGATCAAGCAGGTTAGGTGTGCAGACCGAAGCCAGCAAGAACCTCGCCG
CGAGGACGGTCACACGGGTTTCCAATGGAGCCTTTCTCAACGCCAGCCAG
GCGTCCAAAGCCCTTGCGCCTAAGGGGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig89:571203..573730+ >mRNA_P-littoralis_Contig89.107.1 ID=mRNA_P-littoralis_Contig89.107.1|Name=mRNA_P-littoralis_Contig89.107.1|organism=Pylaiella littoralis U1_48|type=CDS|length=366bp|location=Sequence derived from alignment at P-littoralis_Contig89:571203..573730+ (Pylaiella littoralis U1_48)
CGGAGGGCGGTCCAAGAGAAAGAAAACGCGAAATCCGAGGCGGTCGAGAG
GGCGGACCTTATTCACTCAGCGCTCCAAATCGAGGTGAAGAAGAATAGGG
AAGCGGCGAGGGGGCGGGATCGCGAGCTGGCGGACCTAAAAAAGCAGGTC
GTCCGTACTAGCCGGAGCCTGGCCCTTTCCGAAGCGGAGAGGATAGCCGA
GAGAAACAGCCTGTACAGCAAGATCGACAAACTGAACGAAGAAGCTCGCA
GGTTAGGTGTGCAGACCGAAGCCAGCAAGAACCTCGCCGCGAGGACGGTC
ACACGGGTTTCCAATGGAGCCTTTCTCAACGCCAGCCAGGCGTCCAAAGC
CCTTGCGCCTAAGGGG back to top
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