prot_P-littoralis_Contig89.56.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig89.56.1
Unique Nameprot_P-littoralis_Contig89.56.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length114
Homology
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.840e-73
Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = 0
Query:    1 MRTSTRTGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            MRTS R+GQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEAS+FY GKRIAYIYKAKTLKNGTKYRVVWGKVCR HGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI
Sbjct:   44 MRTSPRSGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASNFYLGKRIAYIYKAKTLKNGTKYRVVWGKVCRGHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 156          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.040e-60
Identity = 88/105 (83.81%), Postives = 99/105 (94.29%), Query Frame = 0
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            QPVRLYVKGV+LG+KRGLRN Y+HTSLIKIQGVED  A++FY GKRIAYIYKAK LKN +K+RV+WG+VCRAHGTNGV+RAKFRTNLPPKAIGAPVRVMLYPS+I
Sbjct:   16 QPVRLYVKGVVLGYKRGLRNQYNHTSLIKIQGVEDTAATEFYLGKRIAYIYKAKALKNNSKFRVIWGRVCRAHGTNGVIRAKFRTNLPPKAIGAPVRVMLYPSRI 120          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA)

HSP 1 Score: 179 bits (453), Expect = 3.770e-56
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0
Query:    7 TGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            + QPVRLYVKGV+LG+KRGLRN Y HTSLIKIQGV+D +  DFY GKR+AYIYKA    NG+KYRV+WGKVCRAHGT GVVR KFRTNLPPKAIG PVRVMLYPS+I
Sbjct:   13 SSQPVRLYVKGVVLGYKRGLRNQYCHTSLIKIQGVDDCKDVDFYLGKRVAYIYKASNKVNGSKYRVIWGKVCRAHGTTGVVRCKFRTNLPPKAIGGPVRVMLYPSRI 119          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A4D9CXD4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXD4_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.480e-55
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 0
Query:    7 TGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            + +PVRLYVKGV+LG+KRGLR   +HTSLIKI G+++K++ DFY GKRIAYIYKAKTLKN TKYR +WGKV RAHGTNGVVRAKFR NLPPKAIG PVRVMLYPS I
Sbjct:    6 SSEPVRLYVKGVVLGYKRGLRQQTNHTSLIKIDGLDEKKSVDFYLGKRIAYIYKAKTLKNNTKYRAIWGKVTRAHGTNGVVRAKFRRNLPPKAIGGPVRVMLYPSTI 112          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A7S1XMC8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC8_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.220e-53
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTL-KNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            QPVRLY KGV+LG+KRGLRN  +HTSLIKIQGVEDK+ + FY GKRIAYIYKA T  K G+K+RV+WGKVCRAHG+NGVVRAKFR NLPP  IGAPVRVMLYPS+I
Sbjct:   16 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 121          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA)

HSP 1 Score: 170 bits (431), Expect = 7.030e-53
Identity = 81/110 (73.64%), Postives = 95/110 (86.36%), Query Frame = 0
Query:    5 TRTGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTL-KNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            T   QPVRLYVKGV+LG+KRG RN Y+HTSL+KIQGV++K+ + FY GKRIAYIYKA T  K G+K+RV+WGKVCRAHG+NGVVR KFR NLPP +IGAPVRVMLYPS+I
Sbjct:    4 TGESQPVRLYVKGVVLGYKRGQRNQYNHTSLVKIQGVDEKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRCKFRKNLPPTSIGAPVRVMLYPSQI 113          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A7S2XUS1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 8.230e-53
Identity = 80/110 (72.73%), Postives = 94/110 (85.45%), Query Frame = 0
Query:    4 STRTGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            +T   QPVRLYVK VM+G+K GLR  + HT+L KIQGV+DK+++ FY GK+IAYIYKA TLK  +KYRVVWGKV RAHG+NGVVRAKFRTNLPPKAIG P+RVMLYPSK+
Sbjct:    9 NTSDAQPVRLYVKAVMVGYKGGLRTQHCHTALAKIQGVDDKKSAGFYLGKKIAYIYKAHTLKKNSKYRVVWGKVTRAHGSNGVVRAKFRTNLPPKAIGGPLRVMLYPSKV 118          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A7S1TVH1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVH1_9STRA)

HSP 1 Score: 172 bits (435), Expect = 9.540e-53
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    9 QPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTL-KNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            QPVRLY KGV+LG+KRGLRN  +HTSLIKIQGVEDK+ + FY GKRIAYIYKA T  K G+K+RV+WGKVCRAHG+NGVVRAKFR NLPP  IGAPVRVMLYPS+I
Sbjct:   62 QPVRLYTKGVVLGYKRGLRNQINHTSLIKIQGVEDKKETTFYLGKRIAYIYKAHTPNKEGSKFRVIWGKVCRAHGSNGVVRAKFRKNLPPSCIGAPVRVMLYPSQI 167          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: A0A329S8J7_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A329S8J7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.400e-51
Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 0
Query:    7 TGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            +GQP RLYVKGV LG+KRGLRN Y HT+L+KIQG+ DK+  DFY GK+IAYIYKAK+LKNGT++RVVWGKV RAHG+NGVVRAKF  NLP +AI   VRVMLYPS++
Sbjct:   24 SGQPTRLYVKGVFLGYKRGLRNQYSHTALVKIQGLTDKKDVDFYLGKKIAYIYKAKSLKNGTQFRVVWGKVMRAHGSNGVVRAKFAKNLPAEAISKSVRVMLYPSRV 130          
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Match: K3W6U5_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W6U5_GLOUD)

HSP 1 Score: 167 bits (422), Expect = 1.550e-51
Identity = 77/107 (71.96%), Postives = 91/107 (85.05%), Query Frame = 0
Query:    7 TGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFYFGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAIGAPVRVMLYPSKI 113
            +GQP RLYVKGV +G+KRGLRN Y HTSLIKIQG++DK+  DFY GK+IAYIYK KTLKN +K+RV+WGKV RAHG NG+VRAKF  NLP +AI A VRVMLYPS++
Sbjct:    5 SGQPTRLYVKGVFVGYKRGLRNQYSHTSLIKIQGLQDKKDVDFYLGKKIAYIYKGKTLKNNSKFRVIWGKVTRAHGNNGLVRAKFAKNLPAEAISASVRVMLYPSRV 111          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig89.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G033_ECTSI1.840e-7395.58Ribosomal protein L35 n=1 Tax=Ectocarpus siliculos... [more]
A0A836CIX4_9STRA1.040e-6083.81Ribosomal protein L35Ae-domain-containing protein ... [more]
A0A7S2SN13_9STRA3.770e-5678.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CXD4_9STRA2.480e-5577.57Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1XMC8_9STRA2.220e-5378.30Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U9P7_9STRA7.030e-5373.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XUS1_9STRA8.230e-5372.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TVH1_9STRA9.540e-5378.30Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A329S8J7_9STRA1.400e-5172.90Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
K3W6U5_GLOUD1.550e-5171.96Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 13..107
e-value: 2.2E-42
score: 143.1
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 5..113
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 15..107
score: 24.444086
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190translation elongation factor selb, chain A, domain 4coord: 1..113
e-value: 2.8E-49
score: 167.6
NoneNo IPR availablePANTHERPTHR10902:SF0RIBOSOMAL PROTEIN L35Acoord: 5..113
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 75..96
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 13..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig89contigP-littoralis_Contig89:336468..341221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig89.56.1mRNA_P-littoralis_Contig89.56.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig89 335499..342168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig89.56.1 ID=prot_P-littoralis_Contig89.56.1|Name=mRNA_P-littoralis_Contig89.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp
MRTSTRTGQPVRLYVKGVMLGFKRGLRNTYHHTSLIKIQGVEDKEASDFY
FGKRIAYIYKAKTLKNGTKYRVVWGKVCRAHGTNGVVRAKFRTNLPPKAI
GAPVRVMLYPSKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001780Ribosomal_L35A
IPR038661L35A_sf
IPR018266Ribosomal_L35Ae_CS
IPR009000Transl_B-barrel_sf