mRNA_P-littoralis_Contig89.54.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig89.54.1
Unique NamemRNA_P-littoralis_Contig89.54.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A6H5LFZ8_9PHAE (Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LFZ8_9PHAE)

HSP 1 Score: 583 bits (1504), Expect = 2.100e-204
Identity = 289/333 (86.79%), Postives = 302/333 (90.69%), Query Frame = 2
Query:  122 MWLALLGLVLVGTRYVSGFVVAPGNALVPARGAAPASPA-RCGASPIVMGATKLVPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLPTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 1117
            MW   + L+ +G  + + FVVAPG AL     AA  S A RCGAS + M ATKLVPFSKYQGLGNDFILVDNRE  EPMLTA ESA+LCDRR GIGGDGVIFALPGSD MDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKK+AEYKIHTLAGTIIP+AR+DGLVTVDMGPPELNGPKVPSTLPTN DG+VLKEPI+VDGKDWEVTCVSMGNPHAVVFVPDV ALDLP +GPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGL DRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR
Sbjct:    1 MWPTTIALLAIGAHHAAAFVVAPGTALGRQGPAAARSAATRCGASTVAMSATKLVPFSKYQGLGNDFILVDNREEAEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKKAEYKIHTLAGTIIPLAREDGLVTVDMGPPELNGPKVPSTLPTNDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 333          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A835YU85_9STRA (Diaminopimelate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU85_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 2.180e-135
Identity = 194/277 (70.04%), Postives = 222/277 (80.14%), Query Frame = 2
Query:  287 FSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLPTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 1117
            F KY+GLGNDFILVDNRE  +P+L+  +SA LCDR  GIGGDGVIFALPG   +DY MRI NSDGSEPEMCGNGIRCMARFLADL+G+KEA Y+I T AG I+P+    GLVTVDMGPPELNGPKVP+TLPT ADG V+  P++V G+ W VTCVSMGNPHA+VFV D+  + L  +GP FE +  FPA+ NTEFVQVL+R H+KM VWERG G T ACGTGACALVVA+VL GL DRKCTVTLPGGDL I+WRE+D KVYMTGPA   F G   V+
Sbjct:   28 FHKYEGLGNDFILVDNRETADPVLSPEQSAKLCDRNFGIGGDGVIFALPGEGDLDYKMRIYNSDGSEPEMCGNGIRCMARFLADLDGEKEATYRIGTGAGLIVPVVGGGGLVTVDMGPPELNGPKVPTTLPTGADGAVVAAPLEVAGQQWSVTCVSMGNPHAIVFVNDLNTIKLADIGPLFEHNAVFPARTNTEFVQVLSRSHLKMKVWERGAGATLACGTGACALVVAAVLNGLADRKCTVTLPGGDLVIDWREADNKVYMTGPATPVFSGSVRVQ 304          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A7R9YC33_9STRA (Diaminopimelate epimerase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC33_9STRA)

HSP 1 Score: 387 bits (994), Expect = 1.550e-127
Identity = 192/288 (66.67%), Postives = 223/288 (77.43%), Query Frame = 2
Query:  269 ATKLVPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAE--YKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTL-PTNADGIVLKEPIQVD---GKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVV 1114
            A K V FSKYQGLGNDF+LVDNR+AEEP+LT  ES  LCDR  G+G DGVIFA+PG DG DYSMRI NSDGSEPEMCGNGIRCMA+FL DL+G   AE  YKI TLAGT++P     G++TVDMG PEL GP+VP+TL PT  D  V+  P+      GKDW+VTCVSMGNPH + FV D+ A+DL  VGPQFE HP FPA++NTEFVQVL++ H+KM VWERG G T ACGTGACAL VA+VL  L DRK TVTLPGGDL IEW E D ++ MTGPA+L F G+A++
Sbjct:   29 AAKKVAFSKYQGLGNDFLLVDNRDAEEPILTPDESEALCDRHFGVGADGVIFAMPGRDGCDYSMRIYNSDGSEPEMCGNGIRCMAKFLQDLDGSSGAEKQYKIWTLAGTMVPTVVASGMITVDMGEPELRGPEVPTTLKPTRDDSAVIDAPMAAPLPGGKDWKVTCVSMGNPHCITFVDDLDAVDLAAVGPQFENHPVFPARVNTEFVQVLSKSHLKMKVWERGAGPTLACGTGACALHVAAVLNNLCDRKATVTLPGGDLIIEWAE-DNRLLMTGPADLVFSGEAML 315          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA)

HSP 1 Score: 377 bits (969), Expect = 1.450e-123
Identity = 183/278 (65.83%), Postives = 218/278 (78.42%), Query Frame = 2
Query:  281 VPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKK--EAEYKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLPTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLT-DRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGD 1105
            V F KY GLGNDFILVDNR + +P+++  ++A +CDR  G+GGDGVIFALP S+  DY+MRI NSDGSEPEMCGNGIRCMARFL  L+G +  E  Y I+T AG IIP+ R DGLVTVDMGPP L GPKVP+TL      +V+  P++V  +DWEVTCVSMGNPHAVVF+ +V +LDL  VGPQFE+HP FPA+INTEFV+V +  H+KM VWERG G T ACGTGACAL VA++LAG T +R C VTLPGGDL+IEWRE + + YMTGPAEL F GD
Sbjct:   50 VAFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP-SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIRGDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFIDNVDSLDLHHVGPQFESHPEFPARINTEFVEVKSPTHLKMKVWERGAGPTLACGTGACALTVAAILAGKTSERTCVVTLPGGDLEIEWREENNRCYMTGPAELVFSGD 326          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A8J5XME3_DIALT (Diaminopimelate epimerase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XME3_DIALT)

HSP 1 Score: 372 bits (954), Expect = 1.220e-121
Identity = 183/288 (63.54%), Postives = 221/288 (76.74%), Query Frame = 2
Query:  248 ASPIVMGATKLVPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAE-YKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLPTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVP--DVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1102
            A P++      + FSKY G+GNDFILVDNR + E +LT  ++  +CDR  GIGGDGVIFALPG DG DY+MRIINSDGSEPEMCGNGIRCMA+F+A LEG+  +  Y I T AG IIP    DGLV VDMG P L+G KVP+TLP +A G V+  P+ V G+ W VTCVSMGNPHA+VFV   D ++L L  +GP FE H +FPA+ NTEFV+VL+R H++M VWERG G T ACGTGACAL+VA+VL GL +R+ TV+LPGGDL+IEWRESDGK+ MTGPAELA+ G
Sbjct:   15 ARPMMGAGGSQLAFSKYHGIGNDFILVDNRASRELLLTPAQAERMCDRNFGIGGDGVIFALPGEDGADYAMRIINSDGSEPEMCGNGIRCMAKFVAALEGRATSHTYTISTRAGPIIPALTADGLVAVDMGRPILDGAKVPTTLPADASGRVIGAPLDVAGRRWAVTCVSMGNPHAIVFVDSLDESSLPLSTIGPLFEKHAAFPARTNTEFVKVLSRTHLQMRVWERGAGATLACGTGACALLVAAVLNGLAERRATVSLPGGDLEIEWRESDGKITMTGPAELAYTG 302          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A7S2HNF9_9STRA (Diaminopimelate epimerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HNF9_9STRA)

HSP 1 Score: 371 bits (952), Expect = 4.860e-121
Identity = 185/280 (66.07%), Postives = 216/280 (77.14%), Query Frame = 2
Query:  281 VPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDG-MDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEA---EYKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTL-PTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAG-LTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1102
            V F KYQGLGNDFIL+DNR+  EP+LT  ++  +CDR  G+GGDGVIFALP S+   DY MRI NSDGSEPEMCGNGIRCM +F+  +EG  E     Y I T AG IIP  R+DGLVTVDMG P L G KVP+TL PT +DG+VL  P++V G++W VTCVSMGNPHA+VFV D+ A+DL  VGP FET+P FPAKINTEFVQVL+  H+KM VWERG G+T ACGTGACAL VA++ +G  T+R CTV LPGGDL IEWRESDGK+YMTG AE  F G
Sbjct:   43 VEFEKYQGLGNDFILIDNRDDPEPLLTPAQAERMCDRNFGVGGDGVIFALPASEAESDYRMRIYNSDGSEPEMCGNGIRCMTKFIQKIEGGAETAKESYHISTGAGPIIPKIREDGLVTVDMGFPILEGSKVPTTLQPTKSDGMVLDAPLEVMGQEWLVTCVSMGNPHAIVFVDDLEAVDLNSVGPVFETNPVFPAKINTEFVQVLDPTHLKMKVWERGAGVTLACGTGACALTVAAIASGRTTERTCTVHLPGGDLDIEWRESDGKIYMTGAAEPVFDG 322          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A2V0NX36_9CHLO (Diaminopimelate epimerase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NX36_9CHLO)

HSP 1 Score: 364 bits (934), Expect = 1.750e-118
Identity = 179/282 (63.48%), Postives = 212/282 (75.18%), Query Frame = 2
Query:  287 FSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLP-TNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAA-----LDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVV 1114
            F KYQGLGNDFILVDNR A EP+LT  ++A LCDR  GIGGDGVIFALP     D +MRI NSDGSEPEMCGNGIRC+ARF+AD++G    +Y+IHTLAG I P    DG V VDMG P L+GP+VP+TLP T   G V++ P+ + G+ W +TCVSMGNPHAV++  + A      LD+  +GPQFE++  FPA+ NTEFV+VLNRGHV+MVVWERG G T ACGTGACA VVA VL G  DR+C V LPGG L IEWRE+D ++YMTGPAELAF G   V
Sbjct:   36 FKKYQGLGNDFILVDNRHAPEPILTPDQAAALCDRNFGIGGDGVIFALPPVGATDLTMRIYNSDGSEPEMCGNGIRCLARFVADVDGAAARKYRIHTLAGLIQPELLGDGQVCVDMGEPILDGPRVPTTLPPTREGGAVVEAPLPLAGRRWGITCVSMGNPHAVIYSANGAPIKVDDLDIFDIGPQFESNTVFPARTNTEFVEVLNRGHVRMVVWERGAGRTLACGTGACATVVAGVLEGKVDRRCRVDLPGGPLHIEWREADNRIYMTGPAELAFSGQVAV 317          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: A0A1Z4J1X5_9CYAN (Diaminopimelate epimerase n=10 Tax=Nostocales TaxID=1161 RepID=A0A1Z4J1X5_9CYAN)

HSP 1 Score: 360 bits (924), Expect = 1.550e-117
Identity = 176/277 (63.54%), Postives = 207/277 (74.73%), Query Frame = 2
Query:  281 VPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEG--KKEAEYKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTL-PTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1102
            + F+KY GLGNDFIL+DNR +  P++T  ++  LCDR  GIG DGVIFALPG +G DYSMRI NSDGSEPEMCGNGIRC+A FLADLEG  KK  +Y+IHTLAG I P    DG V VDMG P+L   ++P+TL P N    V+ +P++V G  WEVTCV+MGNPH + FV DVAA+ L V+G QFE HP+FP +INTEF+QV+   HVKM VWERG GIT ACGTGACA +VA VL G  +RK TV LPGG L IEW E D +VYMTGPAEL F G
Sbjct:    3 IEFTKYHGLGNDFILIDNRSSSTPVITPEQAVKLCDRHFGIGADGVIFALPGENGTDYSMRIFNSDGSEPEMCGNGIRCLAAFLADLEGEAKKSDQYRIHTLAGVITPQLMSDGQVKVDMGIPKLLAGEIPTTLRPANEK--VINQPLEVAGNTWEVTCVNMGNPHCITFVDDVAAIPLEVIGSQFEHHPAFPQRINTEFIQVVRPDHVKMRVWERGAGITLACGTGACASLVAGVLTGKCERKATVELPGGPLLIEWSEIDQRVYMTGPAELVFTG 277          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: UPI001F445AEF (diaminopimelate epimerase n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F445AEF)

HSP 1 Score: 360 bits (923), Expect = 2.190e-117
Identity = 172/277 (62.09%), Postives = 208/277 (75.09%), Query Frame = 2
Query:  281 VPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKK---EAEYKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLPTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1102
            + F+KY GLGNDFIL+DNR +  P LTA E+   CDR  GIG DGVIFALPG DG DY+MRI NSDGSEPEMCGNGIRC+ARF+ADLEGK+      Y+IHTLAG ++P    DGLVTVDMG P L   ++P+TL +  D  V+ +P++V G+ W VTCVSMGNPH + FV DVAA+ L  +GPQFE HP+FP K NTEF+QV+   ++KM VWERG GIT ACGTGACA +VA+VL G ++R+ TV LPGG LQIEW  S+  +YMTGPAE  F G
Sbjct:    3 IEFTKYHGLGNDFILIDNRGSTTPRLTAEEAVRWCDRHFGIGADGVIFALPGQDGTDYTMRIFNSDGSEPEMCGNGIRCLARFIADLEGKEPNASVTYRIHTLAGVMMPQLEPDGLVTVDMGEPRLLAAEIPTTL-SQPDEKVINQPLEVAGQSWSVTCVSMGNPHCITFVEDVAAIPLEAIGPQFECHPAFPKKTNTEFIQVVRPDYLKMRVWERGAGITLACGTGACASLVAAVLTGQSNRRATVELPGGPLQIEWSASNHHLYMTGPAEKVFTG 278          
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Match: UPI001A0C8BC8 (Diaminopimelate epimerase n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI001A0C8BC8)

HSP 1 Score: 359 bits (921), Expect = 4.520e-117
Identity = 172/277 (62.09%), Postives = 204/277 (73.65%), Query Frame = 2
Query:  278 LVPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVIFALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAE--YKIHTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLPTNADGIVLKEPIQVDGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQG 1102
            ++ FSKY GLGNDFIL+DNR + EP L    +  +CDR  GIG DGVIFALPG DG DY+M+I NSDGSEPEMCGNGIRC+A+F+ADLEG +     YKIHTLAG I P    DG VTVDMG P+L   ++P+ L  + +  V+ +P+QV GK W VTCVSMGNPH ++FV DV A+ L  +GPQFE HP+FP + NTEF+QV+   ++KM VWERG GIT ACGTGACA VVA VL    DR CTV LPGG LQIEW E DG+VYMTGPAE  F G
Sbjct:    2 VIEFSKYHGLGNDFILIDNRHSPEPALAPETAVKMCDRHFGIGADGVIFALPGRDGTDYTMKIYNSDGSEPEMCGNGIRCLAKFIADLEGTERVNKSYKIHTLAGVITPKLESDGQVTVDMGAPQLTASEIPTNL-GSPEAKVIAQPLQVTGKSWSVTCVSMGNPHCIIFVEDVDAILLTKIGPQFEHHPAFPQRTNTEFIQVIKPNYLKMRVWERGAGITLACGTGACASVVAGVLNDKCDRLCTVELPGGCLQIEWSELDGRVYMTGPAEKVFTG 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig89.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LFZ8_9PHAE2.100e-20486.79Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID... [more]
A0A835YU85_9STRA2.180e-13570.04Diaminopimelate epimerase n=1 Tax=Tribonema minus ... [more]
A0A7R9YC33_9STRA1.550e-12766.67Diaminopimelate epimerase n=2 Tax=Pinguiococcus py... [more]
A0A7S2S1Q0_9STRA1.450e-12365.83Diaminopimelate epimerase n=2 Tax=Rhizochromulina ... [more]
A0A8J5XME3_DIALT1.220e-12163.54Diaminopimelate epimerase n=2 Tax=Diacronema luthe... [more]
A0A7S2HNF9_9STRA4.860e-12166.07Diaminopimelate epimerase n=1 Tax=Dictyocha specul... [more]
A0A2V0NX36_9CHLO1.750e-11863.48Diaminopimelate epimerase n=1 Tax=Raphidocelis sub... [more]
A0A1Z4J1X5_9CYAN1.550e-11763.54Diaminopimelate epimerase n=10 Tax=Nostocales TaxI... [more]
UPI001F445AEF2.190e-11762.09diaminopimelate epimerase n=1 Tax=Leptodesmis sich... [more]
UPI001A0C8BC84.520e-11762.09Diaminopimelate epimerase n=1 Tax=Pleurocapsales c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig89contigP-littoralis_Contig89:330143..335351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G034
PFAMsDAP_epimerase
Model size1884
Max annot lvl2759|Eukaryota
KEGG rclassRC00302
KEGG koko:K01778
KEGG ReactionR02735
KEGG Pathwayko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00525,M00527
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons6
Evalue4.93e-199
EggNOG OGsCOG0253@1|root,2QQKJ@2759|Eukaryota
Ec32 ortholog descriptiondiaminopimelate epimerase
Ec32 orthologEc-06_009100.1
EC5.1.1.7
Descriptiondiaminopimelate epimerase activity
Cds size999
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig89.54.1prot_P-littoralis_Contig89.54.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig89 330907..335230 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791778.2119615-UTR-P-littoralis_Contig89:330142..3309061680791778.2119615-UTR-P-littoralis_Contig89:330142..330906Pylaiella littoralis U1_48UTRP-littoralis_Contig89 330143..330906 -
1680791778.2944136-UTR-P-littoralis_Contig89:335230..3353511680791778.2944136-UTR-P-littoralis_Contig89:335230..335351Pylaiella littoralis U1_48UTRP-littoralis_Contig89 335231..335351 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791778.2253609-CDS-P-littoralis_Contig89:330906..3311491680791778.2253609-CDS-P-littoralis_Contig89:330906..331149Pylaiella littoralis U1_48CDSP-littoralis_Contig89 330907..331149 -
1680791778.2361617-CDS-P-littoralis_Contig89:331567..3317261680791778.2361617-CDS-P-littoralis_Contig89:331567..331726Pylaiella littoralis U1_48CDSP-littoralis_Contig89 331568..331726 -
1680791778.2464821-CDS-P-littoralis_Contig89:332339..3324561680791778.2464821-CDS-P-littoralis_Contig89:332339..332456Pylaiella littoralis U1_48CDSP-littoralis_Contig89 332340..332456 -
1680791778.2626772-CDS-P-littoralis_Contig89:333111..3332251680791778.2626772-CDS-P-littoralis_Contig89:333111..333225Pylaiella littoralis U1_48CDSP-littoralis_Contig89 333112..333225 -
1680791778.272333-CDS-P-littoralis_Contig89:333907..3340041680791778.272333-CDS-P-littoralis_Contig89:333907..334004Pylaiella littoralis U1_48CDSP-littoralis_Contig89 333908..334004 -
1680791778.2819223-CDS-P-littoralis_Contig89:334961..3352301680791778.2819223-CDS-P-littoralis_Contig89:334961..335230Pylaiella littoralis U1_48CDSP-littoralis_Contig89 334962..335230 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig89.54.1

>prot_P-littoralis_Contig89.54.1 ID=prot_P-littoralis_Contig89.54.1|Name=mRNA_P-littoralis_Contig89.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=333bp
MWLALLGLVLVGTRYVSGFVVAPGNALVPARGAAPASPARCGASPIVMGA
TKLVPFSKYQGLGNDFILVDNREAEEPMLTAGESANLCDRRLGIGGDGVI
FALPGSDGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKI
HTLAGTIIPIARDDGLVTVDMGPPELNGPKVPSTLPTNADGIVLKEPIQV
DGKDWEVTCVSMGNPHAVVFVPDVAALDLPVVGPQFETHPSFPAKINTEF
VQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLTDRKCTVTLP
GGDLQIEWRESDGKVYMTGPAELAFQGDAVVR*
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mRNA from alignment at P-littoralis_Contig89:330143..335351-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig89.54.1 ID=mRNA_P-littoralis_Contig89.54.1|Name=mRNA_P-littoralis_Contig89.54.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5209bp|location=Sequence derived from alignment at P-littoralis_Contig89:330143..335351- (Pylaiella littoralis U1_48)
CTCTGTCCATGGCGCTCAGAGCACTGGAATCTGCCCACTTGCTGTCGCCT TGTGTTTACTCCCACAAGCCGCAGACCATACCTTCTCTCCCTCTTTCTCC CACGGTCAATTTTTCACAGCTATGTGGTTAGCTTTGTTAGGATTGGTGCT GGTTGGCACTCGATATGTCTCAGGTTTCGTGGTGGCCCCAGGCAATGCCC TCGTGCCAGCTCGGGGGGCAGCACCAGCTTCGCCAGCACGATGTGGGGCA TCACCTATTGTTATGGGTGCCACCAAGCTCGTGCCCTTTTCAAAGTACCA GGGGCTGGGCAACGACTTTATACTCGTGGACAACAGAGAGGCTGAGGAGC CGATGCTCACAGCCGGAGAGTCCGCCAACTTGTGCGACAGGTGAGGAATG TGCAAAAAACATGATCAAAAGGGCAGCCTACCTGCTGCTGCGGGTAGCGT TTCCGAAACAGCAGACAGCCGACTTCCGTGTGCAGCAGCAGCAGCAGCAG CAGTTATTGACCACAATCGCTTGCGCTACCAAAGCGTATGCCTTTGAATG TGATCCGGTTCGTTCTGCTCCAGCCTGTTTTCATCACAAGCACCGCTGCT GTAGCTACAGGTTTTACGACGTCGTTGCTGTAGCTGCAGAGCTGCTGTGC TGTGTGCATGTGTCACAGCTGTCTACCGATGAAGTAACCGTATGATGACA CCTGTGGTAGGGTTTTCGATTGTCGATATCTCCACAGCAGGTAGAAATCA AACAACGGAGCATTGCATTGGTGCCGAAAATCCTCGACCCCGGCAATGTC CCGTCAAATTATTTCCGAAAAGCTCATCGCTCATACTCGCACCCTTGTCG TTGTGAAGCTTGACATTGAGCTGTGAAAGATCGTCCATTCCGTCTGTCTT ACTTCGAAGAACTCCGTATAATACAGCAGCACGGTTTCACCCTTTTTTCG TGTGGTGTCGAAAGAGTTGATTGGCGTGTCCACGTGGCTTAACCCTCTTT ACCTTTAGGTAGCTGAATATCGCCATTTTGGGTCGCCATTTAGTTGTTTG TGTGACTCCCAACATTATCTTCAAATTTGACCTCGCTAACAGGTCAATTT TAATTCCCATTCTATAAGCAAAAAAACGCTTTTATAGAGCCTTTGTTAAA AAAAAATCCATGATTTTTCGCAGGCGGTAAAAAGTTGATTAAACGAGTTG ACATGTCACAGCTGTGACCTATCATGGCCCGAATGCTCAATTGGGGAGAA ACATGGATGACTCCACTCCCACCCCCACCCCCGCTACACGCAGGAACTGA CTGCTGTTTCCCTTGTTCTGCCTGCCACCACGCTCCGATGCACAAAGGCG ATTGGGCATTGGCGGGGACGGCGTGATCTTTGCGCTCCCAGGCTCGGACG GCATGGACTACTCGATGCGAATCATCAACTCGGACGGATCTGAGGTACAC ACCGTACCGAGCATGGGCAGTACTTATATGTGGATTTTGAGGTTCCAGAC ACAGGACGCATGACTGGCGCGATCGGTAACTCCCCCGAGATATTCACCGC AAAACAAATGCTTTTAAGGGCCATTCGGTGTTCCAATAGCTTTGCGGAAG GCCCGTTATTGCATTGGTGACAGAATGGGAGCGTTCCGCTTGGACTGAAT GGTTGTGCCGCCGCATTTTGGAACTAGTCTCCCCCCGTGCTAGCTCTGCC TCATGGCGACTGCGCTTTAGAGAGAGATGCGCTCGCGGACTCCATGTAGC AGCCAAGAGGTTCGTTACTGCTCTGAATTGTGAACTGGTATGTTGTATGA AATTAACGATGGCGAAGTGTTCCACCTTTGTACTAACACACCGGATTTAC AGTAGTGCTGTACGATCGTTCGAGTATGGGCACCTCCTCTCGGCTGAGGT GTGTACCCTGCCGATCGTTGCTCATCAAATAGCGTCGAGGGTGTGTGAGT GTGCTGCGTGTGTGTGCGTAAACGTTTACCTGAGGTTATCTTTCGAAATA CCTACATACGGCACAAGTGAACGTAGGATATTGGACAAGGTAAATTTACC TTCAACCCCGCAGCGATGATGTTTAATTTTATTTATTTATTTATTTTTCT CTCGGTCATCAAATTGAAATGCGCAGCCGGAGATGTGCGGCAACGGGATC CGCTGCATGGCCAGGTTTCTGGCGGACTTGGAGGGGAAGAAGGAAGCGGA GTACAAGATCCACACGCTGGCGGGGACCATCATTCCTATCGTAAGACACA AACACCTACTGTATGAAGTTTGATACAGCAGTAGCCCTGAAGCGCGCCCC CAGTACTTTTGCCGAGAACACTAAACAGATCACTAGATACCTCAATGTAC TAGCACGGACACAGCGCAATCTCCTTATTTTCACGTCGAGACATCACACG TCCAGAGCAACATTGGTATTATGTACCATGAGCGAGTACAACCGACACCG TAGCTGAAGATTGCATACTTGTAAGCTGCCTACCAACGCCGCATTCAGGT GACACGCACACTACCCAAGGATGTATTCTGTATGATGTACGATTTGATGC TTTTGTCAGACGAAAACAGAGGTATAGGCCGCTTTTCATTGTCTGGTCGT GTCCAACGCCAAGGGGAGGTTGCCACGAGGTATCAGTTCCACCTGGTGGC CTTGCGGGTCGGCTTCGCCCCACTCTCATAGGAGATACCCAACCCTCTTC CTCCTCCTGCCTTCCCTAATTCCGCCGACAACCATTGCCGTTTTGGTTGG CTGGACGAAGAGGCGCGGGATGTCTGTTTGCGTGTTGCTGTACGCCTTTG GCGCGGCCAACCGACCCCGCGCTGCCCGCCGTCATGTGCCCTTTCCTCGT TTCCCTCGTTCACGGCGCGTTCGATTTCTTGCTCTTTACTCTTAGGCGAG AGATGACGGGCTAGTGACCGTGGACATGGGACCGCCGGAGCTTAACGGGC CGAAGGTGCCCAGCACTCTTCCCACCAACGCCGATGGGATTGTTTTGAAG GAGCCGATACAGGTACGAGCTTTTCCCCATGTCTGCTGGTGACTTCGACA CGTGGTATCCTTGAACCTAGCAGGTAACTTGGTGGACCAAATGAGCAATG CGCAGCGGAATGGCACCTGCAACAGCAACGGTGAATTCAAAGCGGTTAGT CTCCGTGCCTGTCAGTAGTTGCGTAGTTTCCGGAACGCTGGTTCGTGGCG GTGCTGGTGCCTGCGGTATGGTATTAACACAAACCAAATGTCACCTTTTT ATACAGCGCCCCATTTCCTTGTGGCGCTCGACGCTGTATTCTCTGTCTGA TGATTCCTCGCGGTGGTTGGTCGTGCGGAGCCTTCTTTTCATCACATATC GATACTTGTTGCATCACCTTGCCGTGCGCCTACTGATTTGCCACTTCGTG CATTCTCGTGTGAAAGATAGTCTCCGTCTTATACGTTGCAACTCATCACC GGTTTGGGCATGCCCAAAGTCATTTCTCGAGAAACAACCGGCAGTTGTAC ATAGGTAGATCACCGAACAGACGTCGTACCGCCCGCAGTCACGAGTCACA CGTCGCCTGAACCCCCCCACTTGCGCCTTCCACCTTCCATACATGATGTT TGGAAACCCCTCTTTCAACGCAAAGGTTGACGGCAAAGATTGGGAGGTTA CTTGCGTGAGCATGGGCAACCCCCACGCTGTCGTCTTCGTTCCTGATGTC GCCGCCCTGGATCTGCCGGTCGTGGGGCCTCAGTTCGAGACTCACCCATC TTTCCCGGCTAAGATCAACACCGAGTTTGTGCAGGTGAATCCGACATTCT TTGCGGAGTATCAATGAAAACACGCCCTCTTTTGCACATACCGGAACGTC TTCGAACCACCATGTCTCAAATGGTCGCCCAGAGTGTTGTCCCGTCTTGT GTCTCGAGATTTTCTCGGAGGCATCATCAAAGCCAAACATTTCATCGGCC GATGCACGCTATTTATTTATTTCAAGGCTCGTGCCATTGATGTATTATTT GTACGTCACCTTTGATCTTTACGCCTCCTTCTCCATTCCCCGCCCCGCCG TCCCATCTCCCCGCGTTTGAGAAAATCACACTCTGTGCATTATCCCCCCC TTATGCCCACCCACCCCACTGAGAGTATCGAGAAGTACCTGACCCCCCCC CTCCCCCCGCGCGGGCCGCCTTCCTCCTCAAATTATCATGTCCACCGCGC AGGTTTTGAACCGGGGGCACGTGAAGATGGTGGTTTGGGAGCGAGGGTGC GGCATCACTCAGGCGTGCGGCACGGGCGCCTGCGCGCTGGTCGTCGCCTC CGTCCTCGCCGGCCTTACGGACCGCAAGTGCACGGTGACGTTGCCGGGGG GGGACTTGCAGATCGAGTGGAGAGAGTCGGACGGCAAGGTTTACATGACG GGGCCGGCGGAGCTGGCGTTCCAGGGAGATGCCGTCGTGCGGTGACAACA CTAGGTTGTACAGTACGTGCATCTAGGATGTTTATCTTATTGTTTCCTAT TGGGAATGGGGATCGCCCCCTTTCAGTTAGCTTAGCCACCTTTTTGGGGG CAACAGGTTGTGTAGAATTGTAGTACTGCTGTGGTTTTTATCGAGGGTTG CTCATGATCGGGGGGGCGGAAGCCGGGTGATTATTTGGGGCTTGCACACA CGACGAGGCCGGCGAAACTGGCATTCCAGGCGTATGCCGTCGTGTGGAGG CAGCTTTGAATGGTTTTGAAGGCGTGTTACAAAATTTAGTTGCTTTGGAC CCAACAACAGCAGGTATGCAACTAACTGCGACGTTATGATTCGACTGAAC GAAGAAGTTTGCAAGAATAGAAGCTTTCCTAAATATTGAACAGGGGTTGT TGGGCGTGTTGCTCTGTCTTGGACGTAGGCTGGCGCGGTGTTGTGTTGAA AAGGATACACTTGCGCATTCCTCCCTTGGGCTTCCCCTGGACGGCTATAC TTGTGACAGACGAATCCGTCACACTTGAGATCTCCAAAGATCCACAAATA GCAGGAGAAGGTACTCCGAAGGATCCGGGACACCTTATCGCAGCAGATGA TGAAGGGGAGCTATGCTGTTGCTTCTAGCTCTGATTTCTGCCTGTGATAC CTGATTCTAGTAGCAGTCTTCGACCCTTCGACCTACACGTGTCGCAGCTA GCTCGCAACTGCCGAATGTTGGAGGGAAACGCGTGGTTCTTGGGCTTCTG AGCGACACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig89:330143..335351-

>mRNA_P-littoralis_Contig89.54.1 ID=mRNA_P-littoralis_Contig89.54.1|Name=mRNA_P-littoralis_Contig89.54.1|organism=Pylaiella littoralis U1_48|type=CDS|length=999bp|location=Sequence derived from alignment at P-littoralis_Contig89:330143..335351- (Pylaiella littoralis U1_48)
ATGTGGTTAGCTTTGTTAGGATTGGTGCTGGTTGGCACTCGATATGTCTC
AGGTTTCGTGGTGGCCCCAGGCAATGCCCTCGTGCCAGCTCGGGGGGCAG
CACCAGCTTCGCCAGCACGATGTGGGGCATCACCTATTGTTATGGGTGCC
ACCAAGCTCGTGCCCTTTTCAAAGTACCAGGGGCTGGGCAACGACTTTAT
ACTCGTGGACAACAGAGAGGCTGAGGAGCCGATGCTCACAGCCGGAGAGT
CCGCCAACTTGTGCGACAGGCGATTGGGCATTGGCGGGGACGGCGTGATC
TTTGCGCTCCCAGGCTCGGACGGCATGGACTACTCGATGCGAATCATCAA
CTCGGACGGATCTGAGCCGGAGATGTGCGGCAACGGGATCCGCTGCATGG
CCAGGTTTCTGGCGGACTTGGAGGGGAAGAAGGAAGCGGAGTACAAGATC
CACACGCTGGCGGGGACCATCATTCCTATCGCGAGAGATGACGGGCTAGT
GACCGTGGACATGGGACCGCCGGAGCTTAACGGGCCGAAGGTGCCCAGCA
CTCTTCCCACCAACGCCGATGGGATTGTTTTGAAGGAGCCGATACAGGTT
GACGGCAAAGATTGGGAGGTTACTTGCGTGAGCATGGGCAACCCCCACGC
TGTCGTCTTCGTTCCTGATGTCGCCGCCCTGGATCTGCCGGTCGTGGGGC
CTCAGTTCGAGACTCACCCATCTTTCCCGGCTAAGATCAACACCGAGTTT
GTGCAGGTTTTGAACCGGGGGCACGTGAAGATGGTGGTTTGGGAGCGAGG
GTGCGGCATCACTCAGGCGTGCGGCACGGGCGCCTGCGCGCTGGTCGTCG
CCTCCGTCCTCGCCGGCCTTACGGACCGCAAGTGCACGGTGACGTTGCCG
GGGGGGGACTTGCAGATCGAGTGGAGAGAGTCGGACGGCAAGGTTTACAT
GACGGGGCCGGCGGAGCTGGCGTTCCAGGGAGATGCCGTCGTGCGGTGA
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