mRNA_P-littoralis_Contig89.45.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: D7FZ90_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ90_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.340e-51 Identity = 114/209 (54.55%), Postives = 132/209 (63.16%), Query Frame = 3
Query: 24 MANLLKMASKGDVEGVRKYLKKSGAKINSTDSDGQTALHCGAKGGHVDVCRELLASVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACP-ADGYTPLHIAAKKGFVECAEVLLQHGAPIDGNPDKWGNLPEDSCAVSEIRVLITMARQERATADAAGC------PPPYNPHAATAPPPTEEYKRDMN-NHHASSPEASPS 626
M NL +ASKGD+EGVRK+L +S AKIN+TD GQT LH AKGGHV+VCR VA++LCEAGASTS +DG +PLHIAA KGFVECAEVLLQHGAPID + ++WGNLPE+ C VSEIR LI ARQER DAAG PYNP+AA+APPP EE K + SSP+A PS
Sbjct: 1 MVNLHDLASKGDLEGVRKFLARSAAKINNTDKAGQTPLHIAAKGGHVEVCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQVLCEAGASTSAGLQTSDGRSPLHIAANKGFVECAEVLLQHGAPIDTSRNRWGNLPEEDCVVSEIRTLIAAARQER---DAAGPVAGVAGSSPYNPYAASAPPPMEERKEGVGFPPGCSSPQAPPS 206
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: A0A6P7FUW9_DIAVI (ankyrin-1-like n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FUW9_DIAVI) HSP 1 Score: 66.6 bits (161), Expect = 2.580e-9 Identity = 47/126 (37.30%), Postives = 73/126 (57.94%), Query Frame = 3
Query: 36 LKMASK-GDVEGVRKYLKKSGAKINSTDSDGQTALHCGAKGGHVDVCRELLASVANVDA-EDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACPADGYTPLHIAAKKGFVECAEVLLQHGAPID 407
L +AS+ G+++ V++ ++ GA+IN DS G TALH H V + LLA A+++A E + T L I+ N ++ +LL EAGA+ G P+HIAAKKG++ E L++G +D
Sbjct: 55 LHLASRLGNLDAVQQLIE-GGAEINEVDSSGLTALHVATFSQHKKVAKYLLAHGADLNAIETYQQETPLNISTGINDHEMVRLLIEAGANMQCL-DISGNMPIHIAAKKGYLNIVECFLENGINVD 178
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: UPI001D06E399 (ankyrin-1-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D06E399) HSP 1 Score: 62.8 bits (151), Expect = 5.230e-8 Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 3
Query: 129 TALHCGAKGGHVDVCRELLASVANVDAEDSKHR-TSLLIAVENNRAKVAKLLCEAGASTSVACPADGYTPLHIAAKKGFVECAEVLLQHGA 398
T LH AK G++D+ +LL A+++ R T + AVEN + V +L GA+ V DG TPLHIAAK+GF++ AE LL HGA
Sbjct: 2 TPLHIAAKLGYIDIVEDLLNHGASINFLTLTERYTPIHFAVENGTSVVITMLLSRGANFDVQ-GEDGMTPLHIAAKQGFIDIAEDLLNHGA 91
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: A0A553HIN4_9PEZI (BZIP domain-containing protein n=1 Tax=Xylaria flabelliformis TaxID=2512241 RepID=A0A553HIN4_9PEZI) HSP 1 Score: 61.2 bits (147), Expect = 1.310e-7 Identity = 42/133 (31.58%), Postives = 61/133 (45.86%), Query Frame = 3
Query: 36 LKMASKGDVEGVRKYLKKSGAKINSTDSDGQTALHCGAKGGHVDVCRELLASVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVA---CPADGYTPLHIAAKKGFVECAEVLLQHGAPIDGNPDKW 425
L MA++ + + + L + A N D DG T L GG+ + LL+ A ++ D K R++L A R V ++L + G C G TPLHIA F ++LLQ GA + G KW
Sbjct: 168 LHMAARKGRDKIVRTLLQHNADCNQRDGDGLTPLLHAVIGGYCETVTLLLSHGARIELVDHKSRSALHWAAAQKREAVLRVLLQNGGDRLPVMNKCDDSGMTPLHIAVDSDFEAGVQLLLQFGASVSGQKQKW 300
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: A0A1S3ZBC6_TOBAC (serine/threonine-protein kinase STY17-like isoform X1 n=9 Tax=Solanaceae TaxID=4070 RepID=A0A1S3ZBC6_TOBAC) HSP 1 Score: 61.2 bits (147), Expect = 1.670e-7 Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 3
Query: 33 LLKMASKGDVEGVRKYLKKSGAKINSTDSDGQTALHCGAKGGHVDVCRELLASVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACPADGYTPLHIA 347
LL +A KGDV+GV+ L + +NS D DG+TALH A GHV+V + LL+ AN+DA D T+ A +V +L GA P TP+ +A
Sbjct: 78 LLFLACKGDVKGVKDLLDEDDVDVNSIDLDGRTALHIAACEGHVEVVKLLLSRKANIDARDRWGSTAAADAKYYGNVEVYNILKARGAKV----PKTRNTPMTVA 178
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: A0A442MDY3_9HYPH (C-type cytochrome n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A442MDY3_9HYPH) HSP 1 Score: 60.5 bits (145), Expect = 2.100e-7 Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 3
Query: 45 ASKGDVEGVRKYLKKSGAKINSTDSDGQTA-LHCGAKGGHVDVCRELLASVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACPADGYTPLHIAAKKGFVECAEVLLQHGAPID 407
A KGDV + L +GA +N +SDG A LH H+D R LL A+V A T L+ AV NR + LL GA ++ A PLH+A KKG ++C + L++ GA ++
Sbjct: 27 AKKGDVAAIAAALD-AGANVN--ESDGLAAPLHYAVNRQHLDAARLLLERGADVKAVSKLGGTPLMAAVAKNRPEFITLLLAHGADPNLT--AGKQAPLHVAVKKGCLDCVKALVEAGADVN 143
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: A0A1S3Z4T3_TOBAC (integrin-linked protein kinase homolog pat-4-like isoform X1 n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Z4T3_TOBAC) HSP 1 Score: 60.1 bits (144), Expect = 3.680e-7 Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 3
Query: 33 LLKMASKGDVEGVRKYLKKSGAKINSTDSDGQTALHCGAKGGHVDVCRELLASVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACPADGYTPLHIA 347
LL +A KGDV+GV+ L + +NS D DG+TALH A GHV+V + LL+ AN+DA D T+ A +V +L GA P TP+ +A
Sbjct: 78 LLFLACKGDVKGVKDLLDEDDVDVNSIDLDGRTALHIAACEGHVEVVKLLLSRKANLDARDRWGSTAAADAKYYGNVEVYNILKARGAKI----PKTRNTPMTVA 178
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: UPI001F1E9B70 (ankyrin repeat domain-containing protein n=1 Tax=Mesorhizobium muleiense TaxID=1004279 RepID=UPI001F1E9B70) HSP 1 Score: 58.5 bits (140), Expect = 9.830e-7 Identity = 44/133 (33.08%), Postives = 68/133 (51.13%), Query Frame = 3
Query: 45 ASKGDVEGVRKYLKKSGAKINSTDSDGQTA-LHCGAKGGHVDVCRELLASVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACPADGYTPLHIAAKKGFVECAEVLLQHGAPIDGNP-DKWGNLP 437
A KGD+ + L +GA +N +SDG A LH H+D + L+ A+V+A T L+ AV NR + LL GA+ + A TPLH+A K+G ++C + L++ GA ++ D + P
Sbjct: 27 AKKGDIAAIAAALD-AGANVN--ESDGLAAPLHYAVNRQHLDAAKLLIGRGADVNAVSKIGGTPLMAAVAKNRFEFITLLLAHGANPNST--AGKQTPLHLAVKRGCLDCVKALVEAGADVNARTADSFARTP 154
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: A0A2P4YM66_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YM66_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.030e-6 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = 3
Query: 123 GQTALHCGAKGGHVDVCRELLA-----SVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACPADGYTPLHIAAKKGFVECAEVLLQHGAPIDGNPD 419
G T L A GH D+ ++LL V ++ + +K T+L +A R V +LL + G + A GYTPL +AAK+G+VE +VLL GA I+ D
Sbjct: 241 GLTPLMYAAMYGHADIVKDLLPLSCQRDVDTIETKCNKKCTALYLAASQRRKTVCELLLDVGRAAVDARDWKGYTPLMVAAKRGYVEIVQVLLSRGANIEAVND 344
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Match: A0A6S7J881_PARCT (Transient receptor potential cation channel subfamily A member 1-like (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J881_PARCT) HSP 1 Score: 58.5 bits (140), Expect = 1.420e-6 Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 3
Query: 69 VRKYLKKSGAKINSTDSDGQTALHCGAKGGHVDVCRELLASVANVDAEDSKHRTSLLIAVENNRAKVAKLLCEAGASTSVACPA---DGYTPLHIAAKKGFVECAEVLLQHGAPIDGNPDKWGN-----LPEDSCAVSEI 464
VR KS +N T + QTAL A+ GH V +LL A+ D RT L A+E ++ KLL + + + A DGYTP+H AA +GF+E +LL++GA ++ + + + SCAV E+
Sbjct: 63 VRFIGSKSKRFVNETTENSQTALVLAAQCGHTSVVEQLLDLKADFTISDDSDRTVLHYAIEYP--EMLKLLLKKKDLSRLLINAKEKDGYTPVHNAALRGFIESVRILLEYGAELNVFTNTSRSPLHCAVSSQSCAVVEL 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig89.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig89.45.1 >prot_P-littoralis_Contig89.45.1 ID=prot_P-littoralis_Contig89.45.1|Name=mRNA_P-littoralis_Contig89.45.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=208bp MVYLHGLMANLLKMASKGDVEGVRKYLKKSGAKINSTDSDGQTALHCGAKback to top mRNA from alignment at P-littoralis_Contig89:237126..238609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig89.45.1 ID=mRNA_P-littoralis_Contig89.45.1|Name=mRNA_P-littoralis_Contig89.45.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1484bp|location=Sequence derived from alignment at P-littoralis_Contig89:237126..238609+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig89:237126..238609+ >mRNA_P-littoralis_Contig89.45.1 ID=mRNA_P-littoralis_Contig89.45.1|Name=mRNA_P-littoralis_Contig89.45.1|organism=Pylaiella littoralis U1_48|type=CDS|length=624bp|location=Sequence derived from alignment at P-littoralis_Contig89:237126..238609+ (Pylaiella littoralis U1_48)back to top |