prot_P-littoralis_Contig89.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig89.19.1
Unique Nameprot_P-littoralis_Contig89.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length124
Homology
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BLAST of mRNA_P-littoralis_Contig89.19.1 vs. uniprot
Match: D8LHE6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE6_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 4.480e-26
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0 
Query:    1 GGGGNVEFELQKDNAS-SSSSITGET--GTSKGGVAADGEAWNECPSLPSSKVTNQSFEDCLRAGEGKLREEIKRLHKELQQKTGEDMKRTKGAGALAAQARTIMTQDKTRTAAAALSTKGRASAVQ 124
            G GG+V FE+ ++++S S+S++T +T  G  +GGV       ++  SL SSK +N+SFEDCLRAGEGKLR+EI RLHKE+QQ +G D K  KG G LAAQ R +M  DKTR A A +STK RASAVQ
Sbjct:  390 GNGGSVTFEMNREDSSCSNSNLTIDTAGGNREGGVLPSWPGGDDQTSLCSSKFSNRSFEDCLRAGEGKLRDEIHRLHKEIQQISGNDAKDMKGGGVLAAQTRQMMINDKTRAAVALMSTKSRASAVQ 516
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig89.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHE6_ECTSI4.480e-2655.91Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig89contigP-littoralis_Contig89:151183..155487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig89.19.1mRNA_P-littoralis_Contig89.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig89 151183..155487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig89.19.1 ID=prot_P-littoralis_Contig89.19.1|Name=mRNA_P-littoralis_Contig89.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=124bp
GGGGNVEFELQKDNASSSSSITGETGTSKGGVAADGEAWNECPSLPSSKV
TNQSFEDCLRAGEGKLREEIKRLHKELQQKTGEDMKRTKGAGALAAQART
IMTQDKTRTAAAALSTKGRASAVQ
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