mRNA_P-littoralis_Contig1207.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: D7G6Q2_ECTSI (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Q2_ECTSI) HSP 1 Score: 286 bits (731), Expect = 2.560e-91 Identity = 130/177 (73.45%), Postives = 145/177 (81.92%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGRVVLCSTCSNGLTTQQELHIAYTGTP 532
RGGFG++ I + LAL VTLWRL+CPTTLIRD+LFWGLSE+ +CEIFN+TIEAIHERWG+LV +LQH+AILPKID+FCQAI RGA LDRCWGFIDGT+RAIARPWRMQRLWYNGWKRKHALKYQAVD+ DG+IR LWGPMLGRRHDVAMLG L T L G P
Sbjct: 105 RGGFGVTRIPIQLALVVTLWRLSCPTTLIRDRLFWGLSESKVCEIFNITIEAIHERWGYLVEELQHQAILPKIDVFCQAIWDRGAALDRCWGFIDGTIRAIARPWRMQRLWYNGWKRKHALKYQAVDTPDGMIRQLWGPMLGRRHDVAMLGESGLVQTLQQWFNDANGLPYYIYGNP 281
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: D7G529_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G529_ECTSI) HSP 1 Score: 280 bits (717), Expect = 1.440e-89 Identity = 129/177 (72.88%), Postives = 144/177 (81.36%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGRVVLCSTCSNGLTTQQELHIAYTGTP 532
RGG+G+S + LAL VTLWRLACPTTL+RD+LFWGL+E ICEIFN TIE I++RWGHLV QLQHEAILPKIDM C+AIQ G+PLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVD+ DGI+R LWGPMLGRRHDVA+LG L L + Q+ GTP
Sbjct: 83 RGGYGVSKVPARLALGVTLWRLACPTTLLRDRLFWGLAEPLICEIFNATIECIYDRWGHLVDQLQHEAILPKIDMICEAIQDMGSPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDTPDGILRQLWGPMLGRRHDVALLGESAL-------LQSMQQWFNDDAGTP 252
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5JK13_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK13_9PHAE) HSP 1 Score: 275 bits (703), Expect = 4.920e-89 Identity = 128/181 (70.72%), Postives = 147/181 (81.22%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGRVVLCSTCSNGLTTQQELHIAYTGTPLTRF 544
RGGFG+S + +DLALAVT+WRLACPTTLIRD+LFWG++E IC+IFNLTIEAI +RWGHLV+QLQH+AIL KIDMFCQAI +GAPL RCWGFIDGT+RAI+RP R QRLWYNGWKRKHALKYQA+D+ DGIIRMLWGP+LGRRHDVAM+G S L Q+ GTP F
Sbjct: 13 RGGFGVSRVPIDLALAVTIWRLACPTTLIRDRLFWGIAEQMICDIFNLTIEAIFDRWGHLVNQLQHDAILSKIDMFCQAIHEKGAPLTRCWGFIDGTIRAISRPKRNQRLWYNGWKRKHALKYQAIDTPDGIIRMLWGPILGRRHDVAMVGE-------SGLLQDLQQWFNDAAGTPYYVF 186
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5KND8_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND8_9PHAE) HSP 1 Score: 275 bits (703), Expect = 1.020e-88 Identity = 128/181 (70.72%), Postives = 147/181 (81.22%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGRVVLCSTCSNGLTTQQELHIAYTGTPLTRF 544
RGGFG+S + +DLALAVT+WRLACPTTLIRD+LFWG++E IC+IFNLTIEAI +RWGHLV+QLQH+AIL KIDMFCQAI +GAPL RCWGFIDGT+RAI+RP R QRLWYNGWKRKHALKYQA+D+ DGIIRMLWGP+LGRRHDVAM+G S L Q+ GTP F
Sbjct: 14 RGGFGVSRVPIDLALAVTIWRLACPTTLIRDRLFWGIAEQMICDIFNLTIEAIFDRWGHLVNQLQHDAILSKIDMFCQAIHEKGAPLTRCWGFIDGTIRAISRPKRNQRLWYNGWKRKHALKYQAIDTPDGIIRMLWGPILGRRHDVAMVGE-------SGLLQDLQQWFNDAAGTPYYVF 187
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5JXV8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV8_9PHAE) HSP 1 Score: 272 bits (696), Expect = 4.150e-86 Identity = 121/151 (80.13%), Postives = 136/151 (90.07%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLG 454
RGGFG S + M++AL +TLWRLACPTTL+RD+LFWG+ EA ICEIFNLTI AI+ERWGHLV QLQHEAILPKID+FC AI+ RGAPLDRCW FIDGT+RAI+RP MQRLWYNGWKRKHALKYQAVD+ DGIIR LWGPMLGRRHDVA++G
Sbjct: 105 RGGFGTSRVPMEIALGLTLWRLACPTTLLRDRLFWGIGEAMICEIFNLTITAIYERWGHLVGQLQHEAILPKIDIFCAAIEGRGAPLDRCWAFIDGTIRAISRPRVMQRLWYNGWKRKHALKYQAVDTPDGIIRQLWGPMLGRRHDVALVG 255
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5L0G5_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G5_9PHAE) HSP 1 Score: 268 bits (685), Expect = 1.880e-84 Identity = 125/181 (69.06%), Postives = 145/181 (80.11%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGRVVLCSTCSNGLTTQQELHIAYTGTPLTRF 544
RGGFG+S + +DLALAVT+WRLACPTTLIRD+LFWG++E IC+IFNLTIEAI +RWGHLV+QLQH+AIL KIDMFCQ I +GAPL RCWGFIDGT+ AI+RP R Q+LWYNGWKRKHALKYQA+D+ DGIIRMLWGP+LGRRHDVAM+G S L Q+ GTP F
Sbjct: 105 RGGFGVSRVPIDLALAVTIWRLACPTTLIRDRLFWGIAEQMICDIFNLTIEAIFDRWGHLVNQLQHDAILSKIDMFCQEIYEKGAPLRRCWGFIDGTICAISRPKRHQKLWYNGWKRKHALKYQAIDTPDGIIRMLWGPILGRRHDVAMVGE-------SGLLQDLQQWFNDAAGTPYYVF 278
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5JBG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBG5_9PHAE) HSP 1 Score: 265 bits (676), Expect = 1.890e-83 Identity = 126/185 (68.11%), Postives = 145/185 (78.38%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLA----CPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGRVVLCSTCSNGLTTQQELHIAYTGTPLTRF 544
RGGFG+S + +DLALAVT+WR CPTTLIRD+LFWG++E IC+IFNLTIEAI +RWGHLV+QLQH+AIL KIDMFCQAI +GAPL RCWGFIDGT+RAI+RP R QRLWYNGWKRKHALKYQA+D+ DGIIRMLWGP+LGRRHDVAM+G S L Q+ GTP F
Sbjct: 14 RGGFGVSRVPIDLALAVTIWRPPGAPLCPTTLIRDRLFWGIAEQMICDIFNLTIEAIFDRWGHLVNQLQHDAILSKIDMFCQAIHEKGAPLTRCWGFIDGTIRAISRPKRNQRLWYNGWKRKHALKYQAIDTPDGIIRMLWGPILGRRHDVAMVGE-------SGLLQDLQQWFNDAAGTPYYVF 191
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5KR86_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR86_9PHAE) HSP 1 Score: 258 bits (660), Expect = 6.190e-81 Identity = 114/152 (75.00%), Postives = 132/152 (86.84%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGR 457
RGG+G++ + D+ALAVT+WRLACPTTLIRD+LFWG++E ICEIFNLTIEAI++RWGHLV +LQHEAILPKID+FCQAI +G L RCWGFID TVRAIA+P R QRLWYNGWKRKHALKYQ D DGIIR LWG MLGRRHD+AM+G+
Sbjct: 105 RGGYGVTRVPADIALAVTIWRLACPTTLIRDRLFWGIAEQMICEIFNLTIEAIYDRWGHLVDELQHEAILPKIDIFCQAIHAKGGLLTRCWGFIDRTVRAIAKPRRNQRLWYNGWKRKHALKYQGADIPDGIIRQLWGSMLGRRHDIAMMGQ 256
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5K0Y5_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y5_9PHAE) HSP 1 Score: 254 bits (648), Expect = 4.040e-80 Identity = 112/151 (74.17%), Postives = 130/151 (86.09%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLG 454
RGGFG+S +++ +TLWRLACPTTL+RD+LFWG+ EA +CEIFNL IEAI+ERWGHLV QLQHEAILP +D+FC AI +GAPLDR W FIDGT++AIAR R QRLWYNGWKRKHALKYQAVD+ DGIIR LWGPMLGRRHDV++LG
Sbjct: 13 RGGFGMSRFPTEVSFGLTLWRLACPTTLLRDRLFWGIGEAMMCEIFNLKIEAIYERWGHLVDQLQHEAILPNVDIFCAAIHAKGAPLDRRWAFIDGTIKAIARRSRKQRLWYNGWKRKHALKYQAVDTPDGIIRQLWGPMLGRRHDVSLLG 163
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Match: A0A6H5KAA1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA1_9PHAE) HSP 1 Score: 252 bits (644), Expect = 2.690e-78 Identity = 117/177 (66.10%), Postives = 132/177 (74.58%), Query Frame = 2
Query: 2 RGGFGISTIRMDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLVSQLQHEAILPKIDMFCQAIQHRGAPLDRCWGFIDGTVRAIARPWRMQRLWYNGWKRKHALKYQAVDSADGIIRMLWGPMLGRRHDVAMLGRVVLCSTCSNGLTTQQELHIAYTGTP 532
RGGFG I LALAVTLWR A PTTL+RD+LFWG+ E +CE+FN+T+EAIHERWGHLV +LQ EAIL KID FC+AI +RGAPL RCWGF+DGT+R I RP R QRL+YNGWKR HALKYQAVDS DGIIR LWGPMLGRRHDVA+LG+ L Q G P
Sbjct: 103 RGGFGTQRIPASLALAVTLWRFAAPTTLLRDRLFWGMGETLVCEVFNVTVEAIHERWGHLVEELQVEAILSKIDGFCEAISNRGAPLPRCWGFLDGTLRKICRPGRWQRLYYNGWKRFHALKYQAVDSPDGIIRQLWGPMLGRRHDVALLGQSNLLGVLQQSFNDAQGEPYYLYGDP 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1207.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1207.8.1 >prot_P-littoralis_Contig1207.8.1 ID=prot_P-littoralis_Contig1207.8.1|Name=mRNA_P-littoralis_Contig1207.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=175bp MDLALAVTLWRLACPTTLIRDKLFWGLSEAYICEIFNLTIEAIHERWGHLback to top mRNA from alignment at P-littoralis_Contig1207:22460..23398- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1207.8.1 ID=mRNA_P-littoralis_Contig1207.8.1|Name=mRNA_P-littoralis_Contig1207.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=939bp|location=Sequence derived from alignment at P-littoralis_Contig1207:22460..23398- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1207:22460..23398- >mRNA_P-littoralis_Contig1207.8.1 ID=mRNA_P-littoralis_Contig1207.8.1|Name=mRNA_P-littoralis_Contig1207.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=525bp|location=Sequence derived from alignment at P-littoralis_Contig1207:22460..23398- (Pylaiella littoralis U1_48)back to top |