mRNA_P-littoralis_Contig889.21.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: D7FPX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX2_ECTSI) HSP 1 Score: 375 bits (962), Expect = 1.220e-126 Identity = 210/283 (74.20%), Postives = 230/283 (81.27%), Query Frame = 2
Query: 164 HALATSWWRD-VPCYSHATRRPRVWLPLMMNANPNPPEQQEDGTLDGSEVRGEPTLEQSLDAIDDVFMDRLPGEGRDKVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVSTITEPYDKKEIMKPKVARWKKPEKENDMFYVGEDTGQATGNDPVMLLVAIGGILGLSYVFL 1009
HA A +W R VP TRR RV +P M+ P Q E G EP+LE+SLDAIDDVFMDRLPGEGR+KVKIFGAWLDAD+AGRKAGQGNRAAGLIAR+ GEELTDQE AEIFYEEAI++MRRRDCDASVALL+KAV LAGAD+RRGGEFKLWAAQALQGV RN Q+VEVLKSLK+HRD DVRKVSAELLYIAQAPQLALN +DFV FPD S IT+ YDKK++ KPK+A WKK EKE DMFYVGEDTG GNDPVM L AI GILGLSY+FL
Sbjct: 23 HAAAAAWTRRRVP----PTRR-RV-VPAFMSD----PRQGEGGM-----EFTEPSLEESLDAIDDVFMDRLPGEGREKVKIFGAWLDADVAGRKAGQGNRAAGLIARMKNGEELTDQEKAEIFYEEAIALMRRRDCDASVALLDKAVDLAGADSRRGGEFKLWAAQALQGVNRNNQAVEVLKSLKSHRDFDVRKVSAELLYIAQAPQLALNGEDFVDFPDTSGITDDYDKKDLGKPKIAPWKKSEKEEDMFYVGEDTGVRPGNDPVMFLAAIVGILGLSYMFL 290
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A835ZHV4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV4_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.050e-50 Identity = 112/236 (47.46%), Postives = 144/236 (61.02%), Query Frame = 2
Query: 323 TLEQSLDAIDDVFMDRLPGEGRDKVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVST--ITEPYDKKEIMKPKVARWKKPEKENDMF-----YVGEDTGQATGNDPVMLLVAIGGILGLSYVFL 1009
TLE+ D +DD+ MDR +GRD+VKI+GAWLDADIAGR G N+AA L A+ GE LTD+E E+FYEEAI M + + D + LL +AVA G D+RRGGEFKLW AQALQGV N +V +L+S++TH D DVR V+ ELLYIA AP+L L D V F T I + +D + K K P K+ + YV + +P L VA+ ILG+S + L
Sbjct: 54 TLEEEFDELDDMVMDRPANKGRDQVKIWGAWLDADIAGRNVGSPNKAAALKAKAAAGEALTDREKGEVFYEEAIIYMGKGEYDTAQELLRRAVAFVGEDSRRGGEFKLWLAQALQGVLDNDGAVTLLRSMRTHPDRDVRTVAKELLYIATAPKLDLEAADLVTFGAGLTAGIDDAFDASRYRELKRGP-KVPYKDGQLLEKKPAYVVREYQPPPEANPAFLAVAVAVILGVSALVL 288
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A6V1UNI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UNI6_HETAK) HSP 1 Score: 171 bits (433), Expect = 8.620e-47 Identity = 93/176 (52.84%), Postives = 124/176 (70.45%), Query Frame = 2
Query: 326 LEQSLDAIDDVFMDRLPGEGRDKVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVSTITEPYDKK 853
LE+ LD IDD+ M R E RD+VK++GAWLDADIAGRKAG + + A++ GE L +E EIF+EEA+ M R SVAL+E+AV AG ++ RGG F+LW AQA+ GR + + E LK+L TH D ++R+V+AELLYI +AP++ L DDFV FPD+STITE +D+K
Sbjct: 82 LEKELDLIDDITMGRSEME-RDQVKVYGAWLDADIAGRKAGDNRK---IKAKLASGERLAPEERGEIFFEEAVKAMNRGRYAESVALIEQAVRYAGRESTRGGGFRLWLAQAVYAQGRREGAREGLKALGTHPDSNIRRVAAELLYIYEAPEIKLTKDDFVEFPDMSTITEKFDRK 253
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A7S2V7T9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7T9_9STRA) HSP 1 Score: 169 bits (427), Expect = 6.600e-46 Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = 2
Query: 338 LDAIDDVFMDRLPGEGRD-KVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVSTITEPYDKKEIMK-PKVA---RWKKPEKENDMFYVGEDTGQATGNDPVMLLVAIGGILGLSY 1000
LD IDD+ M+R P + D +V+++GAWLD+DIAGRK ++ L +++++GE+L D E AEIF+EEA+ M D SV L+++AV AG D+RRGG+F+LW AQ L G+ ++++L+ LK HRD DVR V+AE+LYI +AP++ L +DFV FPD S I E Y + K PK+ +WK+PEKE YV G D +A+ L+Y
Sbjct: 86 LDVIDDLSMNRSPNDDGDGRVRVYGAWLDSDIAGRKVA--SKTKELRSKMNKGEQLEDAEKAEIFFEEAVGYMNSGKYDVSVKLIQRAVEYAGWDSRRGGQFELWLAQGLYAEGQIPDAIKLLRGLKVHRDRDVRTVAAEILYIYEAPRMKLRKEDFVEFPDTSLIDEKYAETVWTKGPKIQVARKWKEPEKEE---YVIRSHGPPPKFDLTFGAIALALFAALTY 306
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A7S2BT75_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BT75_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.540e-31 Identity = 85/236 (36.02%), Postives = 132/236 (55.93%), Query Frame = 2
Query: 326 LEQSLDAIDDVFMDRLPGEGRDKVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAG-ADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVSTITEPYDKKEIMK-------PKVARWKKPEKENDMFYVGEDTGQATGN-DPVMLLVAIGGILGLSYVF 1006
+E+ +D IDD+ M+R GRDKVK++G WLDAD+ GRKAG+ N+AA L VD D AE + ++ M+ + A+ L +AV L G + +RRGGE LW AQA+ G ++ +LK L+ H D V KV+ E+ YI +AP+L ++ D+ V PD+S + + +D K M+ V +KKP K++ + +V E + DPV + + +G ++F
Sbjct: 13 VEEEMDRIDDLSMNRPANIGRDKVKMWGVWLDADLVGRKAGK-NQAAFLTDEVD------DDTMAERIFSVGVTQMKLGEYAAAGGLFNRAVGLVGGSSSRRGGEIALWEAQAVHANGDVAAALRLLKGLEQHMDSSVGKVAGEIRYIFEAPKLEMDPDNMVKIPDLSRLDD-WDSKRDMRFATQTTGGPVREFKKPPKKHSLEWVKEQRNEPPAEIDPVQFCLLLSLAVGSIFLF 240
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A7S0TAG8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAG8_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.210e-22 Identity = 77/219 (35.16%), Postives = 111/219 (50.68%), Query Frame = 2
Query: 179 SWWRDVPCYSHATRRPRVWLPLMMNANPNPPEQQEDGTLDG------SEVRGEPTLEQSLDAIDDVFMDRLPGEGRDKVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEE---LTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFV 808
+WW + P S A R WL ++ A G D R T+ + + + R P E +V++FGA LDA +AG +A +R+A L D E+ ++ ++ AEIFY EA+ M R D D +V LL +A + A +RRGG+ +LW AQAL R Q V +L L H D DVR VS EL++I +AP L LN+ ++
Sbjct: 1 AWWIEPPMSSSAASRKARWLLVVAWA----------GLADSWRQVPLGHRRPRLTVRGMTEELTEAA--RFP-ENEKQVRMFGAKLDASMAGVRAV--SRSAILAVLADEEEDSAGVSTEQKAEIFYAEAVERMNRADYDRAVELLNRATSFARPTSRRGGQMQLWLAQALYAANRRPQCVRLLTVLAKHPDRDVRTVSKELMFIVKAPALVLNSSSYM 204
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A2V3J3V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3V9_9FLOR) HSP 1 Score: 92.8 bits (229), Expect = 1.180e-17 Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 2
Query: 323 TLEQSLDAIDDVFMDRLPGEGRDKVKIFGAWLDADIAGRKAGQ----------GNRAAGLIARVDRGEELTDQETAE---IFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVSTITEP 841
+L +D +DD+ DR P +VK+FGAWLD +AGRKA + G+ A + + ++ +E E + + +++ + S AL +A + G +R GG+++LW AQ+L G + + +L+SL+ H D DVRKVS EL +I AP L L F P + P
Sbjct: 54 SLPDDIDQMDDILFDRAPNNVN-QVKLFGAWLDDALAGRKARKNLTPTDKAVSGSDQADASVQSHKKASVSAEEAVEHSSAIFAKGMTMFNKGFYRQSTALFSEAAGIVGHGSRLGGQYQLWHAQSLDAAGDKRNAASLLESLRMHADPDVRKVSRELHFIITAPALELAPGTFFEVPSIDDEPSP 238
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A7J7ICZ3_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICZ3_9RHOD) HSP 1 Score: 92.4 bits (228), Expect = 3.090e-17 Identity = 60/151 (39.74%), Postives = 84/151 (55.63%), Query Frame = 2
Query: 389 DKVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVSTITEP 841
D+ ++FGAWLD + + QG AR G + Q+ AE + + + + + L+ +A ALAG TR GGE+ LW AQAL G+N ++ EVL+ L HRD DVR+V+ LLYI QAP+L L + FV DV I +P
Sbjct: 127 DRSRVFGAWLDNQVLEFERIQG------AARQHPGR--SRQKQAENAFAQGVQELNAGQYAKATDLIFRASALAGHQTRLGGEYLLWLAQALDAQGKNTRAQEVLRRLHYHRDNDVRRVAENLLYILQAPRLRLGPESFVQI-DVEAICDP 268
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: M1VAQ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAQ1_CYAM1) HSP 1 Score: 85.1 bits (209), Expect = 1.150e-14 Identity = 60/174 (34.48%), Postives = 86/174 (49.43%), Query Frame = 2
Query: 287 GTLDGSEVRGEPTLEQSLDAIDDVFMDRLPGEGRDKVKIFGAWLDADIAGRKAGQGNRAAGLIARVDRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALAGADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFV 808
G LD S E E D DD+ D D+ ++FGAWLD + R + + + T QE AE + + + + + +A AL G TR GGE+ LW AQAL G+N ++ EVL+ L+ H+D DVR+V+ LL+I QAP+L L + FV
Sbjct: 106 GELDDSRAGTENDDED--DGYDDISSDSDVDPVLDRGRVFGAWLDNQVL--------RLDRIQSAAMQAPGQTLQERAERAFARGVQALTDGHYATASDAIFQASALPGQQTRLGGEYLLWLAQALDAQGKNARAQEVLRRLQYHKDRDVRQVAESLLFILQAPRLRLGPESFV 269
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Match: A0A0M0JWQ7_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JWQ7_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 4.850e-13 Identity = 54/152 (35.53%), Postives = 79/152 (51.97%), Query Frame = 2
Query: 392 KVKIFGAWLDADIAGRK--AGQGNRAAGLIARV-DRGEELTDQETAEIFYEEAISVMRRRDCDASVALLEKAVALA--GADTRRGGEFKLWAAQALQGVGRNKQSVEVLKSLKTHRDMDVRKVSAELLYIAQAPQLALNNDDFVAFPDVSTI 832
KV FGA LD D+AG GQ NR ++ DRG EL M R + A+V +A A G R+GG++ ++ AQALQ R ++V++LK + H D DVRK++ +LY+ QAP+L L ++FV P + +
Sbjct: 42 KVSAFGARLDDDVAGDNLPVGQQNRRMEEYEKMFDRGNEL----------------MLRGEYKAAVKAFTQATVNAPGGMAGRKGGQYAIYLAQALQAADRKPEAVKLLKKCEAHPDGDVRKIADSVLYVMQAPELKLGAENFVTIPSLQEV 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig889.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig889.21.1 >prot_P-littoralis_Contig889.21.1 ID=prot_P-littoralis_Contig889.21.1|Name=mRNA_P-littoralis_Contig889.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=302bp MSAAPLTFVANAPHLRTSHALATSWWRDVPCYSHATRRPRVWLPLMMNANback to top mRNA from alignment at P-littoralis_Contig889:76446..88784+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig889.21.1 ID=mRNA_P-littoralis_Contig889.21.1|Name=mRNA_P-littoralis_Contig889.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12339bp|location=Sequence derived from alignment at P-littoralis_Contig889:76446..88784+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig889:76446..88784+ >mRNA_P-littoralis_Contig889.21.1 ID=mRNA_P-littoralis_Contig889.21.1|Name=mRNA_P-littoralis_Contig889.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=906bp|location=Sequence derived from alignment at P-littoralis_Contig889:76446..88784+ (Pylaiella littoralis U1_48)back to top |