prot_P-littoralis_Contig10.138.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig10.138.1
Unique Nameprot_P-littoralis_Contig10.138.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length308
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig10.138.1 vs. uniprot
Match: A0A6H5JIG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG7_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 2.160e-40
Identity = 91/238 (38.24%), Postives = 129/238 (54.20%), Query Frame = 0 
Query:   64 DGVTADECSSVRTLGWTLADPLRGLTKTPISPGYSGPLAEARCEDELTKRLLCGAQVWDGGNRGVPLQTRKVGACFCDALALGVFGGGLEAADDAWQYSLPIRVAIVRTALRHMPQFLN-LEY---YTTLHAYDAAVLDEVTTIGCPVTPVLPPMVARVFYLLGVAEMASEFATCQQAAVPWASEALRVKIRPFHPGNSVEVEDGWACVGGQWSKQEQGRDKKGACGVSSVVIKSRCV 297
            DGV  + C  +     +  D L       I PGY G L      D   + LL G +  DGG RGVP++ R  GAC+ +A+ LG+FG      D+A   SL +RVA++R A+ H  +F++  EY   Y TL AY A  +    ++GC    VL   V+RV YLL V E+A EF+  QQAA+PW ++A  +K+R FHPG S++  +G A   G+WSK+  G  K    GV   +  + C+
Sbjct:   31 DGVELEACLGIIQHAKSFKDVLCSEDTDVILPGYEGLLRRPMRVDRTAEDLLNGGEGADGGGRGVPVKVRGNGACYFNAVPLGIFGTKCNTPDEALGLSLSVRVAVIRAAIVHFEEFISGPEYGGFYCTLQAYSAKEVKAAWSLGCDTPEVLTESVSRVLYLLAVREVAGEFSDSQQAAMPWTAQAFGMKMRCFHPGGSMKHVEGGASFAGKWSKELIGPLKP--AGVEPTIYLTMCI 266
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIG7_9PHAE2.160e-4038.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig10contigP-littoralis_Contig10:535606..537654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig10.138.1mRNA_P-littoralis_Contig10.138.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig10 535606..537654 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig10.138.1 ID=prot_P-littoralis_Contig10.138.1|Name=mRNA_P-littoralis_Contig10.138.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=308bp
QHRHAATRATRRAQHLTATCGLASRSLAMSHPGRATNEAANNEWREVLAT
IKEEILALVANKKDGVTADECSSVRTLGWTLADPLRGLTKTPISPGYSGP
LAEARCEDELTKRLLCGAQVWDGGNRGVPLQTRKVGACFCDALALGVFGG
GLEAADDAWQYSLPIRVAIVRTALRHMPQFLNLEYYTTLHAYDAAVLDEV
TTIGCPVTPVLPPMVARVFYLLGVAEMASEFATCQQAAVPWASEALRVKI
RPFHPGNSVEVEDGWACVGGQWSKQEQGRDKKGACGVSSVVIKSRCVALL
RASSKEM*
back to top