mRNA_P-littoralis_Contig887.33.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.760e-56 Identity = 95/129 (73.64%), Postives = 113/129 (87.60%), Query Frame = 1
Query: 334 YSGNFGRSEYARKKGLDKKAGYITSADDSKLEALMDIMRFFEKWRCNL-EKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRHHCQDVVENRFGHMRDGLGSH 717
+SGNFGRSEYAR+ GLDK+AGYI+SADDSKLE L++++RFF+KWR +L EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+ QDV+E+ FGHMR GLGSH
Sbjct: 548 WSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSH 676
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 177 bits (449), Expect = 6.540e-52 Identity = 87/134 (64.93%), Postives = 105/134 (78.36%), Query Frame = 1
Query: 319 MCMCIYSGNFGRSEYARKKGLDKKAGYITSADDSKLEALMDIMRFFEKWRCNLE-KTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRHHCQDVVENRFGHMRDGLGSH 717
+C+ I++GNFGRS+YARK GLDK GY SADDSKLE LMDI+RFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ D P ++N R QD+VE+R+GHM LGSH
Sbjct: 30 VCVRIHAGNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSH 161
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.650e-35 Identity = 69/114 (60.53%), Postives = 85/114 (74.56%), Query Frame = 1
Query: 343 NFGRSEYARKKGLDKKAGYITSADDSKLEALMDIMRFFEKWRCNLE-KTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRHHCQDVVEN 681
NFGRS+YARK GLDK YI SADDSKLE +MDI+ F++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ D P ++N R+ Q +N
Sbjct: 428 NFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQASQKN 541
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 130 bits (328), Expect = 2.490e-33 Identity = 64/135 (47.41%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 331 IYSGNFGRSEYARKKGLDKKAGYITSADDSKLEALMDIMRFFEKWRCNLEKTTL----GD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKV-SRPRDTPRYVNPRHHCQDVVENRFGHMRDGLGSH 717
I++GN+GRS+ RK G K G I S + + ++ L++I+ FF+ W+ LE+ + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ S + R+++PR+ QD+ E+RF H+R LG+H
Sbjct: 62 IFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTH 196
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 115 bits (287), Expect = 9.340e-29 Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 340 GNFGRSEYARKKGLDKKAGYITSADDSKLEALMDIMRFFEKWRCNLE-KTTLGDVTWKKHFITEYSWTDIRVSILGFV 570
GNFGRS+YARK GLDK GYI SADDSKLE LMDI+RFF++WR +LE + TLG WK +FIT++SWTDIRV ILG V
Sbjct: 24 GNFGRSDYARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.340e-28 Identity = 58/129 (44.96%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 331 IYSGNFGRSEYARKKGLDKKAGYITSADDSKLEALMDIMRFFEKWRCNLEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRHHCQDVVENRFGHMRDGLGSH 717
I +G +G +E RK+G +K+ GYIT AD L L++I+ FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+ R ++ PR QD++E+RF H+R G G+H
Sbjct: 471 IMNGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLE-AHFGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDEDLVSGGR------FLYPRMFSQDILEHRFAHIRSGRGTH 592
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 2.750e-17 Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 1
Query: 394 GYITSADDSKLEALMDIMRFFEKWRCNLE-KTTLGDVTWKKHFITEYSWTDIRVSILGFVS 573
GYI SAD SKLE LMDI+RFF++WR +LE + TLGD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKLE-LMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 1.020e-12 Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 391 AGYITSADDSKLEALMDIMRFFEKWRCNLE-KTTLGDVTWKKHFITEYS 534
AGYI SADDSKLE LMDI+RF +WR +LE ++TLGD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.260e-11 Identity = 39/124 (31.45%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 346 FGRSEYARKKGLDKKAGYITSADDSKLEALMDIMRFFEKWRCNLEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRHHCQDVVENRFGHMRDGLGSH 717
+ R K +D + ITS D L+ L++I+ +F+ W +L D+ F+ + +W D+R++ILGFV+M RY+F DD + R +++ + D E RFGH+R G H
Sbjct: 493 YNRDPIDVSKRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLNLFGGSDLALDDLFLPDQTWDDLRLTILGFVAMTRYVFGDDD-WVTEGSRGRYKFMRDWNQASDTCEKRFGHIRANQGCH 615 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig887.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig887.33.1 >prot_P-littoralis_Contig887.33.1 ID=prot_P-littoralis_Contig887.33.1|Name=mRNA_P-littoralis_Contig887.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=239bp MAATDYFVTYYADAGVRSAGWGLSGEFWGPVERFSQQMMQLAKNINNSAAback to top mRNA from alignment at P-littoralis_Contig887:105088..105950+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig887.33.1 ID=mRNA_P-littoralis_Contig887.33.1|Name=mRNA_P-littoralis_Contig887.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=863bp|location=Sequence derived from alignment at P-littoralis_Contig887:105088..105950+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig887:105088..105950+ >mRNA_P-littoralis_Contig887.33.1 ID=mRNA_P-littoralis_Contig887.33.1|Name=mRNA_P-littoralis_Contig887.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=717bp|location=Sequence derived from alignment at P-littoralis_Contig887:105088..105950+ (Pylaiella littoralis U1_48)back to top |