mRNA_P-littoralis_Contig1206.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 369 bits (947), Expect = 6.770e-124 Identity = 178/294 (60.54%), Postives = 217/294 (73.81%), Query Frame = 1
Query: 1 AWPLYIKPMPGDGTFKGRLRMHHVDFKILVDHLRSELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQ 882
+W Y KPM DGTF+ R RM + +F +L D LR +LER+ MGALRNG +PVE+Q+ + LR+LAG S++E M+G+VIARSTAY RVI AIN ELDC WP ED D+ + +R + VIR CVGAMDGLFVR +P+ R P S+YS HKKGFGMNFQG+C+A Y IIAWTMN PG NDRTAFK S F +L+ LPP +I+GDAAYPASD+VLVPYPGT+L DA+NF+QSQ RISIEQ FGIMV+TWGILWRP++ L RV V+ +VVRLHNF R R+
Sbjct: 52 SWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRR 344
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 360 bits (923), Expect = 2.840e-120 Identity = 169/268 (63.06%), Postives = 207/268 (77.24%), Query Frame = 1
Query: 82 ILVDHLRSELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 885
+LVDHLR L+++ MG LRNGA+PVE QV +TLRWLAG S+YE M+GHVIARSTAY VI A+N C EL+CKWP ED A F R S+ V+RKCVGA DGLFVR I+P+ ++ AEPN YY+ HKKGFGMNFQ +CDA+YRI+AW MN PG QNDRTAF FSGF++LL LP +F++GDAAY AS+RV+VP+PGT+L DA N++ SQ R++IEQT+GI+VR WGILWRPME + + VV AVVRLHNFCRDR+V
Sbjct: 72 VLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKV 338
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 357 bits (917), Expect = 2.980e-119 Identity = 173/290 (59.66%), Postives = 213/290 (73.45%), Query Frame = 1
Query: 13 YIKPMPGDGTFKGRLRMHHVDFKILVDHLRSELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQ 882
Y++PM D TF+ R RM + DF L D LR +L+RD MGALRNGA+PVE+Q+ +TLR+LAG S++E M+ +VIA+STAY RVI AIN +L+CKWP +D + + +R + VIR+CVGAMDGLFVR I P + A P S+YS HKK FGMNFQGIC+A Y II WTMN PG QNDRTAFK SGF+ LL +PPD FI+GDAAYPAS+RVLVP PGT L DA+NF+QSQ RISIEQ FGI+V+TW ILW+P+ L RV V+ A+VRLHNF R R+
Sbjct: 60 YVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRR 348
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 314 bits (804), Expect = 1.480e-102 Identity = 159/291 (54.64%), Postives = 198/291 (68.04%), Query Frame = 1
Query: 13 YIKPMPGDGTFKGRLRMHHVDFKILVDHLRSELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 885
YIKPM D TF R RM + DF++LVDHLR L+++ G LRNGA+PVEYQV +TLRWLAG S+YE M+GHVIARSTAY VI A+N C EL+CKWP ED+ + ++ + V+RKCVGAMDGLFVR I+P+ ++ AEPN YY+ HKKGFGMNFQ +C QNDRTAF FSGF++LL LP +F++G+AAY AS+RV+VP+PGT+ P EQT+GI+VR WGILWRPME + + VV AVVRLHNFC DR+V
Sbjct: 60 YIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCS---------------QNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKV 317
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 276 bits (706), Expect = 2.400e-88 Identity = 132/226 (58.41%), Postives = 160/226 (70.80%), Query Frame = 1
Query: 196 GASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCR 873
G S++E M+G V A+STAY +RVI AIN E DC WP +D D+ + +R + VI CVGAMDGLFV P+ R P +YS HKKGFGMNFQ +C+A Y+I AWTMN PG NDRTAFK SGFE++L+ LP +I+GD AYPASD+VLVPYPGT L D++NF+QSQ RI IEQ FG MV+TWGILWRP++ LGRV V+ AVVRLHNF R
Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEG-DDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLR 275
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 248 bits (632), Expect = 2.310e-78 Identity = 111/172 (64.53%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 370 VAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 885
V V+RKCVGAMDGLFVR I+P+ ++ AEPN YY+ HK GFGMNFQ +CDA+YRI+AWTM+ PG QNDRTAF F+ F++LL LP +F++GDAAY AS+RV+VP+PGT+L DA N++ SQ R++IEQT+GI+VR WGILWRPME + + VV AVVRLHNFCRDR+V
Sbjct: 15 VDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKV 186
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 238 bits (606), Expect = 1.720e-73 Identity = 126/276 (45.65%), Postives = 161/276 (58.33%), Query Frame = 1
Query: 13 YIKPMPGDGTFKGRLRMHHVDFKILVDHLRSELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVV 840
+IKP+ D TF R RM + DF++L+DHLR L ++ MG LR GA+PVEYQ+ +TLRWLAG S+YE M+GHVIARSTAY VI A+N C EL+CKWP DV +RKCVGAMDGLFVR I+P+ ++ AEPN YY+ H+KG ++GDAAY AS+RV+VP+PGT+L DA N + SQ R++IEQT+GI+VR WGILWRPME + + VV
Sbjct: 60 HIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV 272
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 226 bits (576), Expect = 6.320e-69 Identity = 127/291 (43.64%), Postives = 157/291 (53.95%), Query Frame = 1
Query: 13 YIKPMPGDGTFKGRLRMHHVDFKILVDHLRSELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 885
YIKPM D TF R RM + DF++LVDHLR L+++ MG LRNGA+PVEYQV +TLRWLAG S YE M+GHVIARSTAY +CDA+YRI+AW MN PG QNDRTAF FSGF++LL LP +F++GDAAY AS+RV+VP+PGT+L DA N++ SQ R++IEQT+GI+V G+ +E VV AVVRLHNFCRDR+V
Sbjct: 60 YIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAY-----------------------------------------------------------------------------------HAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKV 260
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE) HSP 1 Score: 211 bits (537), Expect = 4.420e-62 Identity = 115/297 (38.72%), Postives = 167/297 (56.23%), Query Frame = 1
Query: 4 WPLYIKPMPGDGTFKGRLRMHHVDFKILVDHLRSELERDTTMGALR--NGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELDCKW-PATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 885
W + + FK RM F+ L + L L + LR NGA+ V+ ++ + LR LAGAS + + T Y T + VI AIN E+ + P T D A F+++ + + CV +DGLFV+T+ P+ +DTA +YYS K +G+N Q +C A+YR + + +PG ND A+ S + + LP +++LGDAAYP S+++L PYPG NLP D+FNF SQ R+ IEQ+FGI+V TWGILWRP++ +++ A+ RLHNF RD QV
Sbjct: 70 WDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQV 366
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE) HSP 1 Score: 202 bits (515), Expect = 1.660e-58 Identity = 101/250 (40.40%), Postives = 151/250 (60.40%), Query Frame = 1
Query: 139 RNGAVPVEYQVGLTLRWLAGASMYEGMNGHVIARSTAYKTAFRVIKAINDCTELD-CKWPATPEDVADKTAYFEKRCSVAVIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSRHKKGFGMNFQGICDAEYRIIAWTMNSPGRQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQV 885
R GAV + ++ + LR +AGAS + +++ TA+ ++V+ AIN E+ +P + ++ + A +E++ + + V A DGLFV+T+ PT +T SYYS K G+G+N Q CDA YR + + +PG ND TA+ S +++LPP +++LGDAAYP SD +L PYPG LP DAFNF+ SQ R+ IEQ FGI+V WGILW+P+ +++ A+ RLHNF RD +V
Sbjct: 124 RRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNFLRDEKV 373 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1206.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1206.7.1 >prot_P-littoralis_Contig1206.7.1 ID=prot_P-littoralis_Contig1206.7.1|Name=mRNA_P-littoralis_Contig1206.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp MPGDGTFKGRLRMHHVDFKILVDHLRSELERDTTMGALRNGAVPVEYQVGback to top mRNA from alignment at P-littoralis_Contig1206:22931..24776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1206.7.1 ID=mRNA_P-littoralis_Contig1206.7.1|Name=mRNA_P-littoralis_Contig1206.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1846bp|location=Sequence derived from alignment at P-littoralis_Contig1206:22931..24776+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1206:22931..24776+ >mRNA_P-littoralis_Contig1206.7.1 ID=mRNA_P-littoralis_Contig1206.7.1|Name=mRNA_P-littoralis_Contig1206.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=861bp|location=Sequence derived from alignment at P-littoralis_Contig1206:22931..24776+ (Pylaiella littoralis U1_48)back to top |