mRNA_P-littoralis_Contig1206.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1206.5.1
Unique NamemRNA_P-littoralis_Contig1206.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: D7G2E5_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E5_ECTSI)

HSP 1 Score: 540 bits (1390), Expect = 8.150e-188
Identity = 237/306 (77.45%), Postives = 278/306 (90.85%), Query Frame = 1
Query:  136 MWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQ 1053
            MWFWAH+GFI+T+GRL +DDT T LP RDIF FLSAQDC+NFLRF+R QII+ ++ LCVPD IRT+CGYV++GRTALC+LLYR+AFPCRYKDMR+IFH  DS LCE FNYMLHF++ETWG +LTLD+GRLVP+L+ F E LQ WGCPLPNCWAFIDGTVRAICR  R QRA+FNGHKR+HAIK Q++VTPDG++VDLFGPELGTRHDVHLL++SGVL+   EH+NS+SGDPY++YGDPAYGMSTHLNCPYSAE YGPL+AGM+EFNK MSACRV VEWVFKEMTSKWAFV++KNQQK+LLSP+GV+
Sbjct:    1 MWFWAHIGFIYTVGRLPIDDTATPLPARDIFTFLSAQDCINFLRFSREQIIITVQHLCVPDMIRTDCGYVIAGRTALCVLLYRLAFPCRYKDMRLIFHRSDSCLCETFNYMLHFMNETWGSMLTLDLGRLVPRLDFFAERLQTWGCPLPNCWAFIDGTVRAICRTIREQRAFFNGHKRYHAIKLQSVVTPDGIMVDLFGPELGTRHDVHLLHESGVLVMCQEHMNSASGDPYVVYGDPAYGMSTHLNCPYSAEAYGPLSAGMIEFNKQMSACRVAVEWVFKEMTSKWAFVALKNQQKHLLSPIGVR 306          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 6.860e-170
Identity = 235/371 (63.34%), Postives = 286/371 (77.09%), Query Frame = 1
Query:   52 LRLKERIARKNRALAFLQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 1164
            LR+++RIARK RAL  +Q + + +L++ MWF +H   I+TLGRLA+DD PT    R +  F S QDCV F+RFTR QI+LM+ELL VP  IRTECG+V+ GR ALC+LLYR+AFPC  KDMR+ F L +S +CE FN+MLHF+D  WG LL+LD+ RLVP+L  F EA+   GCPL +CWAFIDGTVR I RP RN+R ++NG+KR HAIKFQ +VTPDG+ VDL+  E+GT HD +LL +S +L  L  H+NS SG PY +YGDPAYG + H+ CP+SA   GPLT  M +FNK+MS CRVTVEW FKEMTSKWAFV MK QQK+LLSPV  QYKVATLLSN HSCLNGGN+ISQYFG  PP+LEEYL V
Sbjct:   50 LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 420          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 465 bits (1197), Expect = 7.590e-159
Identity = 214/346 (61.85%), Postives = 265/346 (76.59%), Query Frame = 1
Query:  127 HSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 1164
            ++ MW   ++ FI+T+  L  DD  T +  RD+  F S QDC+NFLRFT+ QI+LM++LL +P  IRT+CG+ +SGR ALC+LLYR+AFPCR KDMR++F L +S + E FN+MLHF++  WG LL+LD+ RL P+L  F EA+    CPL +CW FIDGTVR I RP R QR Y+NGHKR HAIKFQ ++TPDG+ VD++GP LGTRHD +LL QSG++  LA H NS SG PY +YGDPAYG+S HL CP+SA ++GPLT  M +FN+ MS CRV VEW FKEMTSKW FV MK QQKYLLSPVG QY VATLLSNIHSCLNGGN+ISQ+F   PP+L+EYL V
Sbjct:    5 YTDMWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNIHSCLNGGNQISQFFDVQPPTLQEYLKV 350          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 454 bits (1168), Expect = 9.200e-155
Identity = 212/331 (64.05%), Postives = 258/331 (77.95%), Query Frame = 1
Query:  172 LGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 1164
            + RL LDDTPT +   D   F S QDCVNFLRFT+SQ++LM++LL +P  IRT+C +V+SGR ALC+LLYR+AFPCR KDMR++F L +S +CEAFN+MLHF+D  WG LL+LD+ RL P L  F EA+   GCPL +CW FIDGTVR I RPK  QR ++NGHKR HA+KFQ ++TPDG+ VDL+GP  GTRHD  +L QSG++  L+  +NS +G PY +YGDPAYG+S HL CP+SA + GPLT  M +FNK MS CRVTVEW FKEMT KWAFVSMK QQK+LLSPV  QY+VATLLSN HSC+NGGNEISQYFG  PP+ EEY+ V
Sbjct:    1 MARLELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 330          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 1.460e-144
Identity = 201/311 (64.63%), Postives = 241/311 (77.49%), Query Frame = 1
Query:  232 FLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 1164
            F S QDCV F+RFTR QI+LM+ELL VP  IRTECG V+ GR ALC+LLYR+AFPCR KDMR++F L +S +CE FN+MLH +D     LL+LD+ RLVP+L  F EA+   GCPL +CWAFIDGTVR I RP RNQR +++G+KR HAIKFQ +VTPDG++ DL+  E+GTRHD +LL QS +L  L  H+NS SG PY ++GDPAYG + H+ CP+SA   G L++ M  FNK+MS  RVTVEW FKEMTSKWAFV MK QQK+LLSPV  QY VATLLSN HSCLNGGN+ISQYFG  PP+LEEYL V
Sbjct:    4 FFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVTPDGLIDDLYAAEVGTRHDGYLLAQSALLEKLQTHMNSPSGHPYCLHGDPAYGQTDHVQCPFSASVNGLLSSAMRNFNKSMSQRRVTVEWGFKEMTSKWAFVGMKCQQKFLLSPVATQYNVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 314          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 3.250e-139
Identity = 209/386 (54.15%), Postives = 256/386 (66.32%), Query Frame = 1
Query:  136 MWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILM------------------------------------------MELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEV-FVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 1164
            MW   ++ FI+T+  L  DD  T L  RD   F S QDC+NFLRFT+ Q  L+                                          ++LL +P  IRT+CG+++SGR ALC+LLYR+AFPCR KDMR++F L +S +CE FN MLHF+D  WG LL++D+ RL P+L V F EA+   GCPL +CW FID T+R I R +       +     HAIKFQ +VTPDG+ VDL+G  LGTRHD +LL QSG++  LA H NS SG PY +YGDPAYG+S HL CP+SA +YGPLT  M +FN+ MS CRVTVEW FKEMTSKWAFV MK+QQKYLLSPVG QY+VATLLSN+HSCLNGGN+ISQYF   PP+LEEYL V
Sbjct:   27 MWMAYNMAFIYTMASLITDDVATSLARRDAANFFSPQDCINFLRFTQPQTTLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNRMLHFLDFKWGWLLSVDVERLKPRLLVEFAEAIYNAGCPLTHCWGFIDETIRGIARVRLADTHQLS----IHAIKFQGVVTPDGLFVDLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNMHSCLNGGNQISQYFNLQPPTLEEYLKV 408          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 6.380e-137
Identity = 200/311 (64.31%), Postives = 240/311 (77.17%), Query Frame = 1
Query:  232 FLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 1164
            F S QDCVNFLRFT  QI +M+ELL +P  IRT CG+V+SGR ALC+LLYRMAFPCR KDM ++F + +S +CEAF +MLHF+D  WG LL+L +  +  +L  F EA+   GCPLP CW FIDGTVR I RPKR QR ++N HK  HA KFQ +VTPDG+  DL+GP +GTRHD ++L QSG++  LA  +NS SG PY +YGDPAYG+S HL CP+SA + GPLT  + +FNK +SACRVTVEW FKE+ + WAFV+MK QQK LLSPV VQY+VATLLSN HSCLNGGNEISQYFG  PPS EEYLGV
Sbjct:  388 FFSPQDCVNFLRFTILQITVMLELLLIPAFIRTTCGFVVSGREALCVLLYRMAFPCRLKDMPLVFGMSESRICEAFKWMLHFLDFKWGFLLSLSVESVQLRLLEFAEAVYNAGCPLPRCWGFIDGTVRGIARPKRWQRLFYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAM-LNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSNWHSCLNGGNEISQYFGVGPPSFEEYLGV 697          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5JM46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM46_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 8.480e-122
Identity = 192/345 (55.65%), Postives = 235/345 (68.12%), Query Frame = 1
Query:  136 MWFWAHVGFIH-TLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWA--FIDGTVRAIC-RPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYL 1158
            MWF +HV  I+ TLG LA+DD PT    RD+  F S QDCV F+RFTR QI+LM+ELL VP  IRTECG+V+ GR ALC+LLYR+AFP R KDMR++F  P+ +L     Y+  F  +       + +  L  +     +A    G  L    +   + G  R  C RP RNQR ++NG+KR HAIKFQ +VTPDG+ V+L+G  +GTRHD HLL QS +L  L  H+NS SG  Y +YG+PAYG + H+ CP+S    GPLT  M  FNK+MS CRVTVEW FKEMTSKWAF+ MK Q K+LLSPV  QYKVATLLSN HSCLNGGN+ISQYFG  PP+LEEYL
Sbjct:    1 MWFASHVAVIYITLGLLAIDDIPTGAARRDVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPYRLKDMRLVFR-PERIL-----YLRDFQLDATLHGFQVGVPPLAGRSTAGTKASYFCGGSLQQRLSPDTLLGLHRRNCARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVELYGAVVGTRHDGHLLAQSALLEKLQTHMNSPSGHRYCLYGNPAYGQTDHIQCPFSVSVNGPLTPAMRNFNKSMSRCRVTVEWGFKEMTSKWAFIDMKCQHKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYL 339          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 9.850e-117
Identity = 186/374 (49.73%), Postives = 240/374 (64.17%), Query Frame = 1
Query:  100 LQLRTAAALHSQMWFWAHVGFIH-TLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILM-----------------MELLCVPDRI-RTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 1164
            L+ R    +++ +WF  ++ FI+  + RL LDDTPT +  RD+  F S QDCV+FLRF +SQ+I                   +EL   P  I R +     S +  +  L +  +          +F L +S +CEAFN+MLHF+D  WG LL+LD+ RL   L  F EA+    C L +CW FIDGTVR I RPK  QR ++NGHKR HA+KFQ ++TPDG+ VDL+GP  GTRHD  +L QSG++  L+  +NS +G PY +YGDPAYG+S +L CP+SA + GP T  M +FNK MS CRVTVEW FKEMT KW  V+MK QQK+ LSP+  QY+VATLLSN HSC+NGGNEISQYFG  P + EEYL V
Sbjct:    2 LRCRNLFEVYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFKQSQVIYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFTQS------QHPXVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQLHLIEFAEAIFNSCCRLTHCWGFIDGTVRGIARPKYWQRMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVEWGFKEMTGKWVLVNMKPQQKFSLSPIAKQYRVATLLSNWHSCMNGGNEISQYFGVVPLTFEEYLAV 368          
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 3.160e-116
Identity = 163/290 (56.21%), Postives = 213/290 (73.45%), Query Frame = 1
Query:  100 LQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEW 969
            L+ R    +++ +WF   + FI+ +  L LDDTPT +  RD+  F S QDCVNFLRFT+SQ++LM++LL +P  IRT+CG+V+SGR ALC+LLYR+AFPCR KDMR++F + +S +CE FN+MLHF+D  WG LL+LD+ RL P L  F EA+   GCPL +CW FIDGTVR I RPK  QR  +NGHKR HA+KFQ ++TPDG+ VDL+GP  GTRH   +L QSG++  ++  +NS +  PY + GDPAYG+S HL CP+SA + GPLT  M +FNK MS CRVTVEW
Sbjct:    2 LRCRNLFEVYTDIWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSV-LNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEW 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1206.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2E5_ECTSI8.150e-18877.45DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE6.860e-17063.34DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
D8LL85_ECTSI7.590e-15961.85DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KB08_9PHAE9.200e-15564.05DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L370_9PHAE1.460e-14464.63DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KH29_9PHAE3.250e-13954.15DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KLS3_9PHAE6.380e-13764.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM46_9PHAE8.480e-12255.65DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJ08_9PHAE9.850e-11749.73DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KRJ1_9PHAE3.160e-11656.21DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1206contigP-littoralis_Contig1206:17088..19237 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2E5
PFAMsDDE_Tnp_4
Model size1633
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons3
Evalue2.59e-191
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota
DescriptionDDE superfamily endonuclease
Cds size1131
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789517.1926825-UTR-P-littoralis_Contig1206:17087..175471680789517.1926825-UTR-P-littoralis_Contig1206:17087..17547Pylaiella littoralis U1_48UTRP-littoralis_Contig1206 17088..17547 -
1680789517.2361221-UTR-P-littoralis_Contig1206:19195..192371680789517.2361221-UTR-P-littoralis_Contig1206:19195..19237Pylaiella littoralis U1_48UTRP-littoralis_Contig1206 19196..19237 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789517.2056777-CDS-P-littoralis_Contig1206:17547..180941680789517.2056777-CDS-P-littoralis_Contig1206:17547..18094Pylaiella littoralis U1_48CDSP-littoralis_Contig1206 17548..18094 -
1680789517.2184498-CDS-P-littoralis_Contig1206:18366..187101680789517.2184498-CDS-P-littoralis_Contig1206:18366..18710Pylaiella littoralis U1_48CDSP-littoralis_Contig1206 18367..18710 -
1680789517.2275567-CDS-P-littoralis_Contig1206:18955..191951680789517.2275567-CDS-P-littoralis_Contig1206:18955..19195Pylaiella littoralis U1_48CDSP-littoralis_Contig1206 18956..19195 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1206.5.1prot_P-littoralis_Contig1206.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1206 17548..19195 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1206.5.1

>prot_P-littoralis_Contig1206.5.1 ID=prot_P-littoralis_Contig1206.5.1|Name=mRNA_P-littoralis_Contig1206.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=377bp
MARLRLKERIARKNRALAFLQLRTAAALHSQMWFWAHVGFIHTLGRLALD
DTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGY
VLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFVDETW
GPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQ
RAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLT
LAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNM
SACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSC
LNGGNEISQYFGCPPPSLEEYLGVAV*
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mRNA from alignment at P-littoralis_Contig1206:17088..19237-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1206.5.1 ID=mRNA_P-littoralis_Contig1206.5.1|Name=mRNA_P-littoralis_Contig1206.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2150bp|location=Sequence derived from alignment at P-littoralis_Contig1206:17088..19237- (Pylaiella littoralis U1_48)
CGCAAGGCGGCGCTTTTGTTTCAGTCACGCGGCTGTGTTATCATGGCACG GCTACGATTGAAGGAGAGGATCGCACGCAAAAACCGTGCGCTTGCCTTCC TCCAGCTTCGCACGGCGGCCGCCCTTCATTCTCAGATGTGGTTTTGGGCG CACGTCGGATTCATCCACACACTCGGTAGGCTCGCGCTTGACGACACCCC GACCCATTTGCCAACGAGAGACATCTTCGAGTTCTTGAGCGCCCAGGACT GCGTCAACTTCCTGCGCTTCACCCGATCCCAGGTAGGTGCGCTGCCGAGA TATGTGTGGTCTAGGTGAAGGTTGCACCACAGCAGCAGCAAAACGTGTGC TCTCCCGCCGGGGCCATATGTACATACAATACATTCAGCAGACACACACA CTACCCTGTGGGGCCGCCGACGTTGTGCGGATGCAAGTCATCCATGTTGG GAACGCGCAGAATAGGCGCTGCCGGGTTGCTGAACTTATCCCGTGTGGCT GCGTTGTTCGCTGTGTTGTTTTCGCAGATCATCCTCATGATGGAGCTGCT GTGCGTGCCGGACAGGATTCGAACGGAGTGTGGCTACGTGTTGTCGGGGC GTACCGCACTCTGTATCCTCCTGTATCGGATGGCGTTCCCGTGTCGATAC AAGGACATGCGGGTGATATTTCATCTTCCGGATTCATTGCTATGCGAAGC CTTTAACTACATGTTGCATTTCGTGGACGAGACGTGGGGCCCGCTGCTTA CACTCGATATCGGGAGGTTGGTGCCCCAGCTGGAGGTGTTCGTGGAAGCT CTCCAAGCCTGGGGTTGTCCCCTGCCCAACTGCTGGGCTTTCATCGATGG CACCGTTCGCGCTATTTGTAGGTACGTTTTTAGGCATCTACTGGTGTCCA CCGAGGGTCGGAGGTTTATTAGGAGAGTCTGCCGCTGTTCCTATGGCCTC ATGTTACTCCTCGCGGTGCAAGTACACGGGGCCTCAGGGCTGTTCCTATG CCGGACGCGAGCTTCTCGTGGCGGTTTAGCTACGGGTGAAAGTAGCAGAG TGTACGCCAGAACTCTGTAAGACAGCTAAAGACAGAGTCGTGTTCACAGC ACCGCTCCCTTTCCGTCCGTGTGCTGTTTTCGGTGCACGACAGGCCAAAA CGCAACCAGCGAGCCTATTTCAACGGCCACAAGCGCTTTCACGCCATCAA GTTCCAAGCCATCGTCACTCCAGACGGTATGGTGGTGGATCTCTTTGGGC CAGAACTAGGGACGAGGCATGATGTTCACTTGCTGAACCAGTCCGGTGTG CTGTTGACGTTGGCGGAGCATATCAACAGCTCGTCGGGCGATCCGTATAT CATGTACGGGGATCCGGCGTACGGGATGAGTACACACCTGAACTGCCCGT ATTCCGCGGAAACGTACGGGCCGCTTACTGCAGGAATGATGGAATTTAAC AAGAACATGAGTGCTTGTCGAGTAACGGTCGAGTGGGTGTTCAAGGAAAT GACTTCCAAGTGGGCTTTTGTAAGCATGAAGAACCAGCAGAAGTACCTCC TCAGCCCGGTTGGTGTGCAGTACAAGGTGGCCACACTGTTGTCCAACATC CACTCGTGTTTGAACGGGGGCAACGAGATCTCCCAGTACTTCGGATGCCC TCCTCCCTCGTTGGAGGAGTACCTAGGTGTGGCCGTGTGAGGCAACGCGA TCCGCACTCTTTACGTACTCTTGTGGGTTGTGATAGGGTGTTGGACCAAG TTGGACGCAATGGTGTTCGTGTCGGCTTTGAGTAATTTCCCCATTTGCGT GCTGGCTAGGTTTTTGCCCGGTGAAGGCCGAAACGTTTTGCAGGTGGGGC ATGCACCCACTTGCGCGGTTGTAAGGTTAGCGATCTTTTTGGACCTTTAG AGTTGATGCCGCGTGCGCACGGACGCGAGGGGTAGGTTCTTGCTTGGGTG GAGTGCCAGAGGTGTTGTAGTGCCGACGTCGGTCGTTCGGGTTTAAAACT ACGAGAAGCGTTGGCTATGTAAGCAGTTGGCACCGTTCTCTGCACGTTGT ACTCCTGAATCTGTGGTTGTTCCTGTCGGATGGCTATCAACGAGATGACA GACACGCCGCCGCTCCCTTTTTTGAGCGTCCACCCAGGGACCATCGCGCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1206:17088..19237-

>mRNA_P-littoralis_Contig1206.5.1 ID=mRNA_P-littoralis_Contig1206.5.1|Name=mRNA_P-littoralis_Contig1206.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1131bp|location=Sequence derived from alignment at P-littoralis_Contig1206:17088..19237- (Pylaiella littoralis U1_48)
ATGGCACGGCTACGATTGAAGGAGAGGATCGCACGCAAAAACCGTGCGCT
TGCCTTCCTCCAGCTTCGCACGGCGGCCGCCCTTCATTCTCAGATGTGGT
TTTGGGCGCACGTCGGATTCATCCACACACTCGGTAGGCTCGCGCTTGAC
GACACCCCGACCCATTTGCCAACGAGAGACATCTTCGAGTTCTTGAGCGC
CCAGGACTGCGTCAACTTCCTGCGCTTCACCCGATCCCAGATCATCCTCA
TGATGGAGCTGCTGTGCGTGCCGGACAGGATTCGAACGGAGTGTGGCTAC
GTGTTGTCGGGGCGTACCGCACTCTGTATCCTCCTGTATCGGATGGCGTT
CCCGTGTCGATACAAGGACATGCGGGTGATATTTCATCTTCCGGATTCAT
TGCTATGCGAAGCCTTTAACTACATGTTGCATTTCGTGGACGAGACGTGG
GGCCCGCTGCTTACACTCGATATCGGGAGGTTGGTGCCCCAGCTGGAGGT
GTTCGTGGAAGCTCTCCAAGCCTGGGGTTGTCCCCTGCCCAACTGCTGGG
CTTTCATCGATGGCACCGTTCGCGCTATTTGTAGGCCAAAACGCAACCAG
CGAGCCTATTTCAACGGCCACAAGCGCTTTCACGCCATCAAGTTCCAAGC
CATCGTCACTCCAGACGGTATGGTGGTGGATCTCTTTGGGCCAGAACTAG
GGACGAGGCATGATGTTCACTTGCTGAACCAGTCCGGTGTGCTGTTGACG
TTGGCGGAGCATATCAACAGCTCGTCGGGCGATCCGTATATCATGTACGG
GGATCCGGCGTACGGGATGAGTACACACCTGAACTGCCCGTATTCCGCGG
AAACGTACGGGCCGCTTACTGCAGGAATGATGGAATTTAACAAGAACATG
AGTGCTTGTCGAGTAACGGTCGAGTGGGTGTTCAAGGAAATGACTTCCAA
GTGGGCTTTTGTAAGCATGAAGAACCAGCAGAAGTACCTCCTCAGCCCGG
TTGGTGTGCAGTACAAGGTGGCCACACTGTTGTCCAACATCCACTCGTGT
TTGAACGGGGGCAACGAGATCTCCCAGTACTTCGGATGCCCTCCTCCCTC
GTTGGAGGAGTACCTAGGTGTGGCCGTGTGA
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