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Homology
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: D7G1F0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F0_ECTSI) HSP 1 Score: 607 bits (1566), Expect = 1.320e-209 Identity = 333/414 (80.43%), Postives = 361/414 (87.20%), Query Frame = 3
Query: 291 EAGVPLLKKPAXXXXXXXKRVPAAGGSRGGLRNNKRPXXXXXXXXXXXXXXXXXXXXXXXXXDDVSVVKLDKKAKKGVNKFSTGGGGVGAEARAAAREALAKETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDGLYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALGEWAEDDDDEEYLVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTEKLRKKGMVTKKEKAGXXXXXXXIGGREAEGGGDSDYEIREDGVELTEKDVVRRKTGTWATVTEDAPVVDGEGKQGDGEG 1532
E+ P KK XXXXXXXKR+PA S+GG+RNNKR XXXXXXXX DV+VVK DKK KKGVN FSTGGG GAEARAAAREALAKETMSAGSLF+SSRTAVPVSNAGGATHYTEIDT+ADRD RAILEKN+RLNEEGATTDKDGLYHG AGYKNHIKK+EAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKE+EALGEWAE++++EEYLVES+DDLPFAC+ICRQGF DPIVTNCGHYFCE+CA+E Y+TNPRCAACGKQT+GVFN AKKLTEKLRKKGMVT+KE+AG XXXX EGGGDSDYEIREDGV+LTE DVVRRKTGTWATVT + V+G+GK+ +GEG
Sbjct: 22 ESAAPSFKKXXXXXXXXXKRIPA---SKGGMRNNKRSRVTKGEGKGAGGXXXXXXXX------DVAVVKADKKGKKGVNNFSTGGGSGGAEARAAAREALAKETMSAGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEREALGEWAEEENEEEYLVESDDDLPFACLICRQGFVDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKKGMVTRKEQAGAAGXXXXX--XXDEGGGDSDYEIREDGVQLTETDVVRRKTGTWATVTTEEDAVEGDGKK-EGEG 423
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: A0A6V1N7Z0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N7Z0_HETAK) HSP 1 Score: 340 bits (873), Expect = 5.020e-107 Identity = 166/280 (59.29%), Postives = 205/280 (73.21%), Query Frame = 3
Query: 477 DDVSVVKLDKKAKKGVNKFSTGGGGVGAEARAAAREALAKETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDGLYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALGEWAED----DDDEEYLVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTEKLR 1304
DD V K+ K+ +N FST G +KE M ++ES+R VP AG AT+ TEIDT DRDARAI E+N++LN EGAT D+ +Y GQAGYKN+I+K E+QIGGNK+TGTQGPIRAP+ +RA CRFDYQPDICKDYKETGFCG+GDSCKF+HDR DYKSGW +EQE+E ++K KEKE LGEWA D D D YL++S+D+LPFAC ICR+ F P+ T CGHYFCE+CA E Y+T+ RCA CGKQT G+FN AKK+ E+++
Sbjct: 15 DDTKVAKVQITQKR-INAFSTTSG--------------SKEGMQQAGVYESTREVVPTKYAGDATYTTEIDTATDRDARAIAERNLKLNAEGATNDETKIYRGQAGYKNYIEKKESQIGGNKYTGTQGPIRAPSNIRAICRFDYQPDICKDYKETGFCGYGDSCKFIHDRGDYKSGWQLEQEWEEQQKXXKEKEMLGEWASDAEEGDGDNPYLIDSDDELPFACHICREDFEQPVATLCGHYFCEECALEHYKTDKRCAICGKQTSGIFNQAKKIVERMK 279
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: A0A836CP80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP80_9STRA) HSP 1 Score: 313 bits (802), Expect = 6.450e-96 Identity = 172/305 (56.39%), Postives = 216/305 (70.82%), Query Frame = 3
Query: 621 FESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLN-EEGATTDKDG----LYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEA-LGEWA-------EDDD---DEEYLVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTEKLRKKGMVTKKEKAGXXXXXXXIGGREAEGGGDSDYEIREDGVELTEKDVVRRKTGTWATVTED 1487
F+S+R A+PV GGAT Y E +T DRDARAILE+++ L EEG +G +Y GQAGYK HI K+++Q+ GNKHTGTQGPIRAP + R T FDYQPDICKDYKETG+CGFGDSCKF+HDR DYK+GW E+E+E K+KKR+ +A L W EDDD D++Y V+ + DLPFAC ICR+ FRDP+VTNCGH+FCE CA + Y+ + RCAACGKQT GVFN A++L E + KKG+V KAGXXXXXXX ++ +RE+ VELT K VV ++ G W TV++D
Sbjct: 85 FKSTRDAMPVKTRGGATDYNESETAMDRDARAILERSIALQAEEGGEAGAEGGGPKVYKGQAGYKQHIAKSQSQVAGNKHTGTQGPIRAPQYARTTSVFDYQPDICKDYKETGYCGFGDSCKFMHDRGDYKAGWQQEREWEEKQKKRRAAQAALEAWGGEGERPVEDDDGSGDDKYAVDEDGDLPFACFICREAFRDPVVTNCGHHFCEACAMDNYKRSTRCAACGKQTGGVFNFARRLVEHMAKKGLV----KAGXXXXXXXX----------XEFAVREE-VELTAKSVVTKQQGGWQTVSDD 374
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: A0A024GUG8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUG8_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.070e-85 Identity = 135/240 (56.25%), Postives = 176/240 (73.33%), Query Frame = 3
Query: 594 KETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDG-LYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALGEWAEDDDDEEYLVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTEKLRKK 1310
K+T+ ++ ES R VP AG AT+ T+IDTE DRDARA++EKN+ LN+ G+ D G LY GQA YKN+I K+E+QIG NK+TGTQGPIRA T+ R+ CRFDYQPD+CKDYKETGFCGFGD+CKFLHDR DYK GW +E+E+ K+ ++++ G+ ++ D+ EYL+ +DD FAC ICRQ F++ + T CGH FCE+CA +Q+R RC CGKQT G FNVA + +K KK
Sbjct: 50 KDTLGREAMIESERQVVPHVYAGDATYETQIDTEKDRDARAVMEKNISLNKAGSIDDTSGKLYKGQAAYKNYIAKSESQIGMNKYTGTQGPIRAQTWARSICRFDYQPDVCKDYKETGFCGFGDTCKFLHDRGDYKGGWQIEKEYNEKQMTQRQRIIQGKKIDEVDENEYLISDDDDEQFACTICRQPFQNAVKTICGHIFCEKCALKQFRKTSRCFNCGKQTNGAFNVASEHRQKEEKK 289
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: F0WQ73_9STRA (Uncharacterized protein AlNc14C195G8554 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ73_9STRA) HSP 1 Score: 277 bits (708), Expect = 3.230e-83 Identity = 134/240 (55.83%), Postives = 174/240 (72.50%), Query Frame = 3
Query: 594 KETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDG-LYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALGEWAEDDDDEEYLVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTEKLRKK 1310
K + ++ +S R VP AG AT+ T+IDTE DRDARA+LEKN+ LN+ G+ D G LY GQA YKN+I K+E+QIG NK+TGTQGPIRA T+ R+ CRFDYQPD+CKDYKETGFCGFGD+CKFLHDR DYK GW +E+E++ K+ ++++ G+ ++ D+ EYLV + D FAC ICRQ F+D + T CGH FCE+CA + +R RC CGKQT G FNVA ++ +K KK
Sbjct: 50 KNDLGREAMIDSERQVVPHVYAGDATYETQIDTEKDRDARAVLEKNILLNKSGSIDDTSGKLYKGQAAYKNYIAKSESQIGMNKYTGTQGPIRAQTWARSICRFDYQPDVCKDYKETGFCGFGDTCKFLHDRGDYKGGWQIEKEYKEKQMAQRQRTLQGKTLDEVDENEYLVSDDADEQFACTICRQPFQDAVKTICGHIFCEKCALKHFRKTSRCFNCGKQTNGAFNVAWEIRKKEDKK 289
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: F0Y2F8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2F8_AURAN) HSP 1 Score: 275 bits (702), Expect = 4.370e-83 Identity = 129/241 (53.53%), Postives = 171/241 (70.95%), Query Frame = 3
Query: 597 ETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDGLYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALGEWAEDDDDEEYLVES------EDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRT-NPRCAACGKQTEGVFNVAKKLTEK 1298
+ M ++F SSR PV + GGA + + DT+ D+DARA+L + L E GAT D+ GLY GQAGYK+++K NEAQIG NK+TGT+GPIRAP+F+R TCRFDYQPD+CKDYK+TGFCG+GDSCKF+HDR DYK+GW +E E++ ++++ KE+E LG+ E D D+E ++LPFAC +CR F+DP++T CGHY+C CA +R N RC C KQT G+ N A KL K
Sbjct: 5 DRMQGAAVFASSRDVAPVEHRGGAFAHQDFDTDKDQDARALLRRKFELQEAGATNDETGLYQGQAGYKSYVKLNEAQIGANKYTGTKGPIRAPSFVRNTCRFDYQPDVCKDYKDTGFCGYGDSCKFMHDRGDYKTGWQLEAEYQRQKERDKEREMLGKLGEPDSDDEREANKFRVGAGAEELPFACHLCRGPFKDPMMTTCGHYYCASCASSHFREKNTRCPICEKQTYGMLNAAPKLRAK 245
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: A0A7S2SX26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SX26_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.810e-82 Identity = 162/356 (45.51%), Postives = 214/356 (60.11%), Query Frame = 3
Query: 477 DDVSVVKLDKKAKKGVNKFSTGGGGVGAEARAAAREALAKETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDGLYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALG---EWAEDDDDEEYLVESEDD-LPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTEKLRKKGMVTKKEKAGXXXXXXXIGGREAEGGGDSDYEIREDGVELTEKDVVRRKTGTWATVTEDAPVVDGEGKQGDGEG 1532
D VV+ D++ +K VN FS+ A + ++ E + E ++ V G AT +EIDT DRDARA+LEK++RL + + D +Y GQAGYK I+K E+QIGGNKHTGTQGPIRAP F RATCRFDYQPDICKDYK+TGFCGFGDSCKF+HDR +YK+GW +E+E+E K+ KRK+ A+G + EDD++++ V EDD LPFAC +CR F++P+VT CGH+FC QC + Y ++P C C K T G+FN ++KL K G G G + G + R D V + +R G+WATV ED +GDGEG
Sbjct: 27 DGTQVVRDDERERKRVNAFSS----------AEEQTGMSGEGLRFADQSEGAQQHV---YGGSATAESEIDTARDRDARALLEKSIRLQGDSESVDGKKVYRGQAGYKQFIEKKESQIGGNKHTGTQGPIRAPAFFRATCRFDYQPDICKDYKDTGFCGFGDSCKFMHDRGNYKTGWQLEKEWEEKQAKRKQLLAMGLDPDGTEDDEEKQLRVNGEDDDLPFACFLCRGPFKEPVVTTCGHFFCHQCIAKSYESSPLCPVCTKNTAGIFNHSRKLEALANKHG--------GYDGLFRDSSGEKDAG---TAAAPRSDQV-VRPAPARKRPQGSWATVQED---------EGDGEG 348
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: A0A067BZM1_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BZM1_SAPPC) HSP 1 Score: 275 bits (703), Expect = 2.320e-82 Identity = 150/277 (54.15%), Postives = 194/277 (70.04%), Query Frame = 3
Query: 477 DDVSVVKLDKKAKKGVNKFSTGGGGVGAEARAAAREALAKETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDG-LYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALG-EWAED-DDDEEYLVESEDDL-PFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTE 1295
D +VV + AKK +N FST G A++A A E M A L S+R AV + AG AT+ ++IDTE DRDARA+LEKN++LN +G D G Y G+AGYKN++ K E+Q G NK+TGTQGPIRA T+ R+ CRFDY PD+CKDYKETGFCGFGDSCKF+HDR DYKSGW +++E++ KE+K+K+ A G E+ D DD++Y+++S+DD FAC ICRQ F + T CGH+FCE CA ++Y+ C C KQT GVFN+AKKL E
Sbjct: 25 DAPAVVAVAVDAKKKLNTFSTSG----------AKKAKAAEIMDA-RLQASTREAVRQTYAGDATYESQIDTEKDRDARALLEKNIKLNADG--NDISGTFYQGKAGYKNYVTKKESQAGMNKYTGTQGPIRAQTWARSICRFDYAPDVCKDYKETGFCGFGDSCKFMHDRGDYKSGWQIDKEWDEKERKKKQALAAGLEYNSDGSDDDKYVIKSDDDEGQFACTICRQPFTKAVETLCGHFFCEACALKRYKKTSLCFNCKKQTNGVFNIAKKLRE 288
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: A0A485KGZ0_9STRA (Aste57867_4890 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGZ0_9STRA) HSP 1 Score: 275 bits (703), Expect = 2.810e-82 Identity = 146/278 (52.52%), Postives = 195/278 (70.14%), Query Frame = 3
Query: 477 DDVSVVKLDKKAKKGVNKFSTGGGGVGAEARAAAREALAKETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDG-LYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKE--KEALGEWAEDD-DDEEYLVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRTNPRCAACGKQTEGVFNVAKKLTEK 1298
D S V L K++K +N FS+ +A++ E M A S+R +V S AG AT+ +IDTE D+DARAILEKNV++N EG D G +Y GQAGYKN++ K E+QIG NK+TGTQGPIRA T+ R+ CRFDY PDICKDYKETGFCG+GD+CKFLHDR DYKSGW +++E++ KE+K+++ KE G + D DDE+Y+++S+D+ FAC ICR F + + T CGH+FCE+CA ++Y+ + C C KQT GVFNVAK+L E+
Sbjct: 26 DGTSAVTLPTKSRKKLNTFSS-----------SAKKQNGSEVMDA-RFQTSTRQSVRQSYAGDATYELQIDTEKDKDARAILEKNVKMNAEG--NDLSGKIYQGQAGYKNYVTKKESQIGMNKYTGTQGPIRAQTWARSICRFDYAPDICKDYKETGFCGYGDNCKFLHDRGDYKSGWQIDKEWDEKERKKQQALKEGRGTGDDSDSDDEKYVIKSDDEEQFACTICRNPFTNAVETICGHFFCEKCALKRYKKSSLCFNCQKQTNGVFNVAKRLRER 289
BLAST of mRNA_P-littoralis_Contig885.11.2 vs. uniprot
Match: A0A8J2X4S8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4S8_9STRA) HSP 1 Score: 273 bits (697), Expect = 6.370e-81 Identity = 147/304 (48.36%), Postives = 195/304 (64.14%), Query Frame = 3
Query: 594 KETMSAGSLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTDKDGLYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEALGEWAEDDDDEEY------LVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCAREQYRT-NPRCAACGKQTEGVFNVAKKLTEKLRKKGMVTKKEKAGXXXXXXXIGGREAEGGGDSDYEIR--EDGVELTEKDVVRRKTGTWATV 1478
++ + A ++F SSRT P+ + GGA Y E+DTEAD+D RA LE+N+ L + T+ DG Y GQAGYK+++KK+EAQIG NK+TGT+GPIRAP F+R TCRFDYQPD+CKDYK+TGFCG+GDSCKF+HDR DYK+GW +E EF+ + + LG+ +D +EE + + D+LPFAC ICR FRDP+VT CGHYFC CA + +R+ N RC C KQT G+ + A KL K + G K + G G + +G G Y R + G + EK R TG W +V
Sbjct: 50 EDALQASAVFASSRTTAPIDHRGGAFAYGEVDTEADKDTRAQLERNLELQK----TEGDGTYRGQAGYKSYVKKDEAQIGANKYTGTKGPIRAPQFVRNTCRFDYQPDVCKDYKDTGFCGYGDSCKFMHDRGDYKTGWQLEAEFQRQXXXXXXXKMLGKLDGEDSEEERERDKFRIKDGGDELPFACHICRGPFRDPMVTQCGHYFCANCASDHFRSRNTRCPICEKQTYGMLSAAPKLRAKAKAVGGFEKFFELGLKVPD----GDDDDGKGGEAYGARVAQPGAQRPEK---REATGYWQSV 342
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G1F0 |
| Preferred name | RNF113A |
| PFAMs | zf-C3HC4_3,zf-CCCH |
| Model size | 2443 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K03661,ko:K13127,ko:K15696 |
| KEGG TC | 3.A.2.2 |
| KEGG Pathway | ko00190,ko01100,ko04142,ko04145,ko04721,ko05110,ko05120,ko05152,ko05323,map00190,map01100,map04142,map04145,map04721,map05110,map05120,map05152,map05323 |
| KEGG Module | M00160 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008270,GO:0008380,GO:0009987,GO:0010467,GO:0010468,GO:0016020,GO:0016070,GO:0016071,GO:0016074,GO:0016567,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0030154,GO:0030182,GO:0031323,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034247,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0043144,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043484,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046872,GO:0046914,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1990904 |
| Exons | 8 |
| Evalue | 6e-215 |
| EggNOG OGs | COG5152@1|root,KOG1813@2759|Eukaryota |
| Ec32 ortholog description | Zinc finger, CCCH-type |
| Ec32 ortholog | Ec-07_000790.1 |
| Description | snoRNA splicing |
| Cds size | 1377 |
| COG category | U |
| BRITE | ko00000,ko00001,ko00002,ko03041,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791773.1420667-UTR-P-littoralis_Contig885:50529..51431 | 1680791773.1420667-UTR-P-littoralis_Contig885:50529..51431 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig885 50530..51431 - |
| 1680791773.2480874-UTR-P-littoralis_Contig885:61482..61646 | 1680791773.2480874-UTR-P-littoralis_Contig885:61482..61646 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig885 61483..61646 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791773.15536-CDS-P-littoralis_Contig885:51431..51716 | 1680791773.15536-CDS-P-littoralis_Contig885:51431..51716 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 51432..51716 - |
| 1680791773.165118-CDS-P-littoralis_Contig885:52296..52449 | 1680791773.165118-CDS-P-littoralis_Contig885:52296..52449 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 52297..52449 - |
| 1680791773.1796365-CDS-P-littoralis_Contig885:53399..53564 | 1680791773.1796365-CDS-P-littoralis_Contig885:53399..53564 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 53400..53564 - |
| 1680791773.193541-CDS-P-littoralis_Contig885:54537..54648 | 1680791773.193541-CDS-P-littoralis_Contig885:54537..54648 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 54538..54648 - |
| 1680791773.2097151-CDS-P-littoralis_Contig885:55044..55126 | 1680791773.2097151-CDS-P-littoralis_Contig885:55044..55126 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 55045..55126 - |
| 1680791773.2196286-CDS-P-littoralis_Contig885:55484..55649 | 1680791773.2196286-CDS-P-littoralis_Contig885:55484..55649 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 55485..55649 - |
| 1680791773.229024-CDS-P-littoralis_Contig885:56384..56589 | 1680791773.229024-CDS-P-littoralis_Contig885:56384..56589 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 56385..56589 - |
| 1680791773.238424-CDS-P-littoralis_Contig885:61271..61482 | 1680791773.238424-CDS-P-littoralis_Contig885:61271..61482 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig885 61272..61482 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig885.11.2 >prot_P-littoralis_Contig885.11.2 ID=prot_P-littoralis_Contig885.11.2|Name=mRNA_P-littoralis_Contig885.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=459bp
MLSKNKNSQHTRSRTSVRLMEDRSSDTPSTKPVVAAEHEAAGEAGVPLLK
KPAFKKPAFKKRVPAAGGSRGGLRNNKRPRPATAAAAADKGQGKGDNSSS
SSSEDDVSVVKLDKKAKKGVNKFSTGGGGVGAEARAAAREALAKETMSAG
SLFESSRTAVPVSNAGGATHYTEIDTEADRDARAILEKNVRLNEEGATTD
KDGLYHGQAGYKNHIKKNEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQP
DICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEKEAL
GEWAEDDDDEEYLVESEDDLPFACVICRQGFRDPIVTNCGHYFCEQCARE
QYRTNPRCAACGKQTEGVFNVAKKLTEKLRKKGMVTKKEKAGGAAGGGAI
GGREAEGGGDSDYEIREDGVELTEKDVVRRKTGTWATVTEDAPVVDGEGK
QGDGEGSA* back to topmRNA from alignment at P-littoralis_Contig885:50530..61646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig885.11.2 ID=mRNA_P-littoralis_Contig885.11.2|Name=mRNA_P-littoralis_Contig885.11.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11117bp|location=Sequence derived from alignment at P-littoralis_Contig885:50530..61646- (Pylaiella littoralis U1_48)
GCCGTCCAAGCACGTCCACCGTGCGACAGTTGTGGTGCTGGCGGCTGCGA
CTCGTCACACTGGCTTTCTGCTTTGTCTACCCCGCTTCGAAAATTCCAAA
AACTGGGGCTCCGTGCTTGAGTAATCCAAGGACGTGTGCGTTCGGTCGGG
CGATTGCAGATTGAATGCTCTCCAAAAACAAAAACAGCCAACACACCAGA
TCACGAACATCCGTAAGGTTGATGGAGGACAGAAGCAGCGACACGCCAAG
CACGAAGCCGGTAGTAGCGGCAGAGCATGAAGCCGCTGGTGAAGCAGGTG
TGCCGTTGTTGAAGAAACCAGCTTTCAAGAAGCCGGCTTTCAAGAAGCGG
GTGCCTGCTGCCGGAGGTTCAAGAGGTGTGTGCGGGACATGAGCGCAGCG
CGCTTCCTAGACTCGGTCGCTGTTTCTCACCGCTGCTTCCTTGGCTGCTG
GTGCCAGATATGGGCAATCCTTTGCAAAGGGGGGGCGTTTGCCATTCCCA
GAACAGAAGTTGACTTCACAGCAGTTGTTGTCAGTCACAGGCAGTGTTCA
TTTTTTAATTTTTAATTTTTTTTCCACCCGCATTACCCCTTTAGGCTACT
TATTATAGCTCGAAAACGCCCTCATTAGAAAAGGCCTTCTTCAATAAGAA
CATTTCGAACAAGATCTTCGAGAGCACCGCTTCTTACAGGATCTTCGAGA
GCACCGCTTCTTACAAGTACTCCGAGTATAAAGGAATTCCCAACCGCAGT
TGATTTTATTTTTTCCATGGGTGACTCATTTTTTTTCATGAGTAATGAAT
GATTGACCGACAGGCGGTGTTGACATCGTTTCAACAGGCTACTGCTGCTG
TGGCGTATTTGTTGATCACTTTCGAATGAATGAAGCCACATCAATATCAA
AGCCATGACCCGTAAGCTGTGTGTATGGTCGTGCTCCTCCGATTGTCGTT
TGAGGACGCGAGGCATCAACAGGCTCTCAAAAAAAGATTGCAGGCGTCGA
TGACGTGTGAAAAAAAATAGGAGAAGAGAAGGAACTCCGCAGCAGCAGCG
GAAGCAGCAATCAATGTATTTTGCGCAGGTACACCAGTTTGGTTTCTCTT
CCATAACCATCGAACCAACTGAGCCACAGCAATACCAAAGCCATCGGCCG
TGAGCTGTGTGTCTTGTCCCCCTCCTCCGTTGGTAATCTGGGGCCGCAAG
GCATCAATATGCTAACAATCTAGCCGTTGCAGAAACCGATCACTTGTGAA
AAAAGAGAAGAAATCTCCGCCGTCTGTCTGTACTGCTGTAGGTAACATAC
AGCAGTATGTATTTGCTGGACTCCTCAACGGCCTTCTTTCTTTCTTCTCA
ATTTTTTCACAACTCATCGGTTTCTGCAACGCTTCGATTGCTAGCCAGTT
GATGCCTTGCGGCCTTAGATGACAAACGGAGGACAAGGACCAGAGGCATA
GCTCACGGGCGATGGCTTTAGTATTGCTGTAGCTCAATTAGTTCGAGAGT
GATGGATGAAAAACCAAACTCATGTAGCGGCCCAAAATACAAAATACCTG
CTGCTGCTGCTGCTTGCTGCGGCTCCCTCCCCTGCCCGCTCTCCGTCATC
CCACACTACTTTTGACTTTCGTCCATTGCTCTCGAACGAATGAACCCACG
GCAACAACAAAGCAATCGTCCTTGAGCTGTGTGTCTGTGGTCCCTCTCCT
CCGTAGGTCATCTGGGGCCGCGAAGTATCGATAGGCTTGCAAAAATAATA
CTGTAGTTGTTCAAGTAAAAAAATTACTCCGTACTAGAAAAGTTGAGATC
AAAAAAGGGGGTTTTTCCATCTACAACAAGTTGTCAAAACACCCAAGATC
ACAAAAGGTCTTTTCTAAGGAGGGTTTTTGCAGCTATAATAACTCTTGGG
CTACTTATTATGTATCGAATCTGGATATCAAAACTGATTCGTTTTCGATA
ATGGGCCCAGATCTGGCAGCTTATGTGATCAGAAACGGGCCATTTTTGAT
AAAAACGTTTTCAATAATCATTTTTGATCCAGCACCAGCTCAGAAATGAG
CCTCATTTCTGATCTACTCCGCATATCACAAATGATTATTGAAAACGTTT
GAGACTCCGACGCAAGCCATCATACAACACAAGCACCCACAGCAGCAGCA
GCAGTACTGCCACATCACTACTGCTGCTGCTGCTGCTACATTATCGCGGG
CGGTCAGCGTGTTACTTCCTCGTCGTCGCCCGCCAGCGGCGTGGCCCTTC
ATCCCATGGCGGCAGCAGCAGAGAGCGACTGATTGCGTTTCACCTTCAAG
CACGCGTACACTGCTGCTGCGCAGACAGATGCCCTGCATATATATGAATC
ATCTGCAGTAGTAGTATTGTTGTTGCTACGAATAGCCTCCCAAAACAAGC
TTGAAATAGGTCTGGGTGTACTCCGAGTAGTTGAGCGGGAGGGACAACAC
CTTGTCTAGATTTATGGTTTGCGCGCGGTGCTGCTATGTTCTGGCTGTGA
CCCAGCTCGTCGTGCTCCATCTCGAGAGGGTGCTGCGCTCGCTCCAAAAT
TTTGAAATGTGCTGTACTTCTGTATACCCAAACGGCTCTTGGGATCCTAC
ATACCAGGTATACGATGCTGACTGCTGTACGAAAAATACGCGTTTGATAT
TGATAAATTGTTTATTTAACACATAAGATCCGATGTTGATACCACCCTGT
GGGAATTGTCACTATCGAAACGAATCATAATTGATATTTTGATTTTGACA
CATAATAAGTAGCCTTAGGGCCCGGATCAACGGAAGAGCAAAAAAAACGA
AATAGCGAAAACGAAAACGAAATTGGGCTCTGATTGGTCGGAGCTAAAAA
AGAAAGAGGCGTGTTTTGTTTCCACGCCCTCCGGGGAGGCGTCACGTCGT
TTTCGATTTCGCAAAAATAAAGTATTTTGGACCTTATTTTTTGCGAAATC
GAAAAACGAAATTCAACATGGAAGGCTTTAGGCGGGGATGCTTCAGCTCT
GCGAGGCACATCCGGTTGACCTTTGCACAGCAGACAAGTTTATATGCTGA
TTGATATCTCGCCACACAAGGGACGACACTCCCTACCAACCGGATATCTA
GAGAGATGAGCTTAGCGTCAACTAGAAACACCCAAGGTTTGGGGCAGTGG
GGTGTCAAGCGGGACGGGAAAAAAGTTTTTAATCTACCGACGTTGATCCG
CTCGTGCTCTGAGCCGATTTGGGGGTGAGGTTTGCAAGCAGCCAAGTTCA
CGTTTTCACTGGTAACTCGGCGAAATATGGACGAGATTCCCTACCAACTG
CGTCCCTAGAGAGCTGATCTTACTGGCCATCGGTACAGTCCAAAGTTTGG
GGCAGCGGGGTGTCAAGCGTGGCTGGAAGCAAGGCATCAGTCGTTGCAAA
AGTTCAAACAACAAGTCTTTCGCCTCTTTCGAGAGAGAGAGAGGGTTGCT
TCGAAACTCGTTGTCCGTCGTGTCCGTGCGTGGCGGTTTTCCGAACCTCA
GCCTTTTCCGATAGAGGATAGACATATCTCTGTATCGGTGCGGTTGAAAG
GGGATTTCGTCAGGACTTTGGCGAGATGTCAGTGAAAACGTCGACACTGC
TGCTGCTCGAAGAGTCAAGGCAAATGGTGTTTCTCTCGTTCATCCCCTCT
TCTCCAGGACCCTGGTGACAGGTCCGTCGTCGCAGCCCGAAAAAAAAAAA
AAGACCTACTGTCGTTAATACCCAACAGTTCGTTTTCCTCCGAAAACGAA
GTTAATTTCGTTCTGTGTGTGTGTGTTGTCATCCCTTTCATTGGACGCCA
CTCTACACCTTTCGGGTAGGTAGTCGCTCCAACCGGGGTCACACAGGGGG
AAGTCAACACAGGATTCTTTTTTTTTTTTTCACTTCCCTCTGCGGTGCTT
GCCTTTCTGGTTATATCGCGAGACAGGGGACAGCAATCCCTTTCCCTCGT
CGATGGTACGATCGAATTTTGTTTACTCACGAATTGATCGCTTTCCACTT
TCACGCGCAATGTGAGAAAAAGCCCCAGATCGTGTTACTGCACTGGGATT
CGAACTCACGCGTGAATGTCAGAAGGTGGCGTGGATAACCAACTGAACCA
CCGGGGCAACCGCAGTCCTAATTTCGTTTATTTTGTCTACCGTTGATCTC
CGCTCTTACCCCGGCTCTCGCCCAATCGCCTGGACAGGCGACCAAACACG
AGTGCCTGTTGGAAAAAGCCTTCCTTTCACGGTCTCTGATTGGTCAGCCT
CATGTGTACGTGAAGCACCCTGTTGGAAAAAGCCACCAGAACCAAGCCAC
AAGAAACCTCTATTTACACTCTGTTTCAGGAGATTTAGTTGAGCACACGA
ACCATGTCATACATACGTACCCACCGCAACCCAACCCAACCCTAACCCTA
ACCCTAAACCTAACCCTAACCCTCACGACCGACCGCGGAGGGCCGTTGTG
AGCACAACCGCGGCTGCAACCGCGGCTGCGCCGCGGTCGTGAAACGCGGA
TGGTCCGAGGCCGTGAAATGTCATAGAAAGGAAGGCTTTTTTCCAACAGG
CACTCATGCTTGGTCGCCTGTCCAGGCATTTTTACGTGAAACGCCCTTTA
CCCCACAAGCAGGTTCTATCTCCAACAGTCTCCAGTAAGGAATAGAGAGC
ACAATAAAGAATACCTGGTAAACAGCAGTAGAATCAGTACAACAGCATGT
TCGTTAGATAGGCTTACAGCAGTATCCACTAAACGCAACACAGCAGTATG
CAGATAGTTTACACTTCAGTACATCAGCTGCCTTTGCTGTTTCGCAGTAG
CAACACACCCCCTTCTTCCCGCATCTAATACTGCTGTATCCACTCTGCAT
CAGTTTTCTCAACCGACGGATGACACAGGAGCAGCGAGCCCCCTTGAGGC
AAAACCACATCATACCAAACCATACCCACAGACAGTAGTGCCACCTCGAA
AAACTATTCTGAACAGCCCGCAACATTCAAAACCTGGATGCCTGAACCCA
GCTCACCAGCCCCCCCCCACCCCCTCCGCTGCGCGCGCGTGCTCGCCGCA
ACGTCAGGCGGTCTGCGCAACAACAAACGACCAAGGCCGGCAACAGCAGC
AGCAGCAGCAGACAAGGGTCAGGGTAAGGGTGACAACAGCAGTAGCAGCA
GCAGCGAAGACGATGTTTCCGTGGTGAAGCTGGACAAGAAGGCCAAGAAG
GGCGTGAACAAGTTTTCCACGGGAGGCGGGGGCGTCGGCGCGGAAGCTCG
AGCAGCCGCAAGGTGCGTTGGAAGTCTGATTAAGATGCGGCGGCATACCC
TACACCGGCATAGTACAAGTAGGTGTTGCTGTACCGACCCGCTCAAAATG
CGCGAGGTTTCTAGTGCGGACTTGATTTTTTTCGATTTGGGCAATTTCTC
TCTTCCTCTATAGGACAATGTAACTTCATCATTGCCTTGCTGCGTTCCTC
AAATCTGTACAGTACCAACATTCAAAAGGCTACGCTTCTTGTGAGCGACA
TTCTTGTGATAGAACCGTCTTTTGCACCAGCTCGGTCTCGGACGGCGTAC
TGATACACCCCCCCGAGTGTACAAGGCATGCACGGCGCATCATACTGATT
TACACCCCTGAGTGCACGAGGCATGTCGTGCTCTCTCCGGGTTATCTTGC
TGTCCGGTGTTGTAGTTTCTTCTATTCCGGTCGCTTCTATTCCGCCGCAA
GCGTTCGGGCGTGGGGCGCGCAGCTTAGGTCCTACGAGCTGCAAAGATGG
TACAAATAAACTAAGGACTTACCAAGCCATGAGTTTTTTTTTTTTTTTCG
CCAGTCATACCCTACATGTACGCGCATAGTAAAATGCATGTAGTTACAGG
GTATCTATTTTCCTTTTATCTCTTGGCTGGCTTGTGAGGTACACACATGA
GTCGCGGAGAAGAACAGCAGTAGCATATGTCTGTCGAGGGCTTGAACGGC
TTCCTCTCCCGTATCGCGGTTTTGTTTTGTTTTGCTTTGTTTTTAAGGGA
GGCGTTGGCCAAGGAAACTATGTCTGCCGGGAGCCTGTTCGAGTCCTCGA
GAACAGCCGTGCCGGTCAGCAACGCGGGAGGGGCGACGCACTACACGGAG
ATCGACACTGAGGCCGACAGGGATGCCAGGGCCATCCTGGAAAAAAACGT
GCGTCTCAACGAGTGAGTCCATGTGTAACGGCAACCTGACGCAGTAGTAC
TCGAAGGTCAACACGCAGATGCCTGTGGTGTTTTGTTCTCCCAATGCTTG
CTGCATGAAGCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCGAAAAGCCTGCACGTTTG
CATCTAGCTCGTTGCCGTTGTAGGATGCAAGTGTTGAAATTTCGGGTGTA
CCTCCGATGTGTCATTTCTTTTTCAGAGTTTTCATTTGTTTTACCCAACC
CCACTTCCTCGCCCCGGAACCAACTAGTCCTCGGCCGCATCTCGTCTGCT
TTTTTTTTTTTGGAATCCAGGGAAGGGGCAACGACGGACAAGGACGGGCT
GTACCATGGGCAGGCGGGATATAAAAACCACATCAAGAAGAATGAGGCAC
AGGTGCGAGGTCACCAGCAGCGAGAAACTTGCGCCGAGTCGCGCTGTTGC
AGCTTCATGCAGTGGCCCGCCTCTTTCTGGTTTGCCGCCGGTATTGCGTC
CCAGTGGAGAGTTTAGACCTATGCAGGCCGTTTTTTTTTTTTTTTTGGCC
GTGAAAATTGCACGCCACTTGGCATCCGGTGAGATCCCCGTCACTTTTGC
GGAGTCGGCTATTATCTCTGACCCCAAGACTACTTCGGGCCTTCTGCCCC
CCTCAGCCGTGTGGCGCGACCGCTTCAACAGGATGTTTATGTTTCTCTTT
CGCCCCGCGAGTTGACTGCGATTTTCATGCTTGTCCGGTTGATGTGCTCG
TTGTTTTTCGCTGCTTGGCGACACTTCTTTCTGGCCCGTACAATGTAGAT
AGGGGGAAATAAACACACGGGAACCCAAGGCCCCATTCGAGCGCCAACCT
TCCTGCGAGCCACCTGCCGGTTCGACTACCAGCCGGACATCTGTAAGGAC
TACAAGGAGGTGCGTGGTGTGCGGCCCCTCGCAGATGGGACAATGAACGC
ACACGCGTACTCGACACAGCTACTCACGTGTATGTCAGCATGGAAACCGT
GTATGATCGAACCAGTCTTGCCTGTATGACACCTTTTCTCGGAGCGTGGT
TGTCCCGGAAGACACAGCTGCTCTGTTTTTCCGGAGTGGGGCGGGATGGC
AGGTAGAGAAGGTAGTATCCAAAAATCGACCCCGATGCCAGCAGACACGC
GTCGGACTTTTCACATCACATGTTCATGACGCTTTCCACGGCACGTCGAG
ATATATGTTTGGCGTCGCCCGTGCCCCTCTGACAGCACGGCGTGCTTTGC
GAACACCTCTGCTGGGTATATATCGTATCATACAGTAGCAACTTCTTCTG
TACCAGTTTGTTTTTTGGTACGAAGCCTTGGCATGCACTGCGCTCGGAAC
AGTCGTGCTTGTCCTTGGGGACACATGAAACTCCGTAGATGATATGAGTG
CCCATTATTGCAGCACGGATTGGTTGCCGCACGTCGGGCTCACCCGCCGA
AACGTCTTGTTGCTTTCAAGCCGGCAAGAACATTCGTTTGTCATCCAAAC
AATCGCATTTCTGTACAGCAGCAGCAGTTTAGGACACCCAAACTAGGAAG
AGCCGCTTATATTTGTGTACTGTAGGCTGGCTGCATTCCTCTGTTCGATT
ATGAATTGTGTCTCATGCGGCATATGATCATATACCAAAACCTTTGATAT
TCCTTGAAACCCGAGTTCACCAGGTACTCTCACTGTGTTTGTAGAGCGTC
TCTTTGCAGGGTGTGCTCTACTCTTGTTGTTTTGGAGCGGAGTTCGCTTC
ACCAATGTTCCGTCAGTGCCACCATCCCGCACACACACACTCTTCCGGAT
TCATGTGGCTAACGCCCGTCCTTCACCCCCATGATCTCCCGCGCTGGAAT
CAAACAATGCCTTGCGGGCAATAAATACCCAGACCGGTTTCTGCGGGTTT
GGCGACAGCTGTAAGTTCTTGCACGATCGAGCGGACTACAAGTCGGGGTG
GGCGATGGAGCAGGAGTTTGAGGCTAAGGAAAAGAAGAGAAAAGAGAAGG
AAGCGCTGGGGGAGTGGGCGGAGGATGATGACGACGAGGAGTACCTGGTG
AGCTGTCTGTCAGTCGCCGATGTTGTGGTTGCTTATTTTGCCCTTGCTCA
TACCGTCGCTGCTAGTGCAGTGTTTGTTGTGGCAGCTGTTGCGGTTTGTG
TGGCAAGGCTCCTACCGTGTTTCTTCATGACTTTTTGTTTTTTGTTGTTG
TTGTTGATTCTCGCTCGAAACACACGAAAAAAACAAAAGATTGGAGACCG
ACACAACCAAGACAACCATAATCATACATACCGAACCAGAGCACAGAACC
AAGAGAGAGTATTGTGGCACGTGACTGCTTTGTTTTTGGCGCCGGCGATG
ACAGAGTAGTGGCGGAAAAATCGTGGAGGTGTTGGTCGTGGTGGAAGTGG
GTTTGGTGGCATCTACTGGGGCTGCTGTGGTGGCGGTAGTGTGATCGCGT
GATCGCGGTAGGCGTGGTTGTATGGGTTTCTTGTCTCTCTTTGTTATTTC
GTGATGGCACCTCTAATCGTTTCTTGATCCCCTCCTGGAGTCCCAACCCG
CCGCTTCTCGCTCGCCAGCGTATGCGTTTCATGTACTGCCACCCCGCCGC
TTCTCGTTCGCCAGCGTATGCGTTTCATTTGCCCGCGATGCTTCCGCGTA
GAACCGGTTCCACGTCAACAAAGTAGGAGTTCTATTTCGCTACATACCAA
AACGATTCCATGTCAAAACGCCTCTGAACGCGTGAAATTTCCATATCAAA
GATTGTTTCGTCGAAACCCTCGCCGCCGGAAACCTTTTTTGCCAAACCGC
CATCAATTTTAAACGCGTTCGTGTCGAAATCCGTCCAAACAGGCACGCCT
CTGCAAGCGAAACCCTTCCTGAGGGTTGTCCGTTCGTCGTCATCGTGTTG
AAAAGTTACTTCGATATGCTAAGACCTTCAATATACTGCATTTAGATTTC
TGCCCGCCCAACTCATAACTCCTTTTTTTGTTCTGATGTTTTCATAGGTG
GAGAGCGAGGACGATCTTCCGTTCGCCTGCGTGATCTGCAGGCAAGGGTT
CCGCGACCCCATCGTGACCAACTGCGGCCACTACTTCTGCGAGCAGTGTG
CCCGGGAACAGTACAGAACAAACCCTCGCTGCGCCGCGTGCGGGAAACAG
GTGCGACGCACGGTGCCAGGGAGTTGCGCTCTTGCGAGCAAAGTCACTGC
GGCGTTTTTTTTAGTCCGAATGGAGTCTTTCCAACAACGTCTCATCGAGC
TTTGCGGAGTGCGGCCCTTCCTAAACCTTCGCGGAGTGAACTATTCGCAT
CGCTGTATCGTCCATAGCCTCAAATGAGAGATTACGAAGTCCAGAGGAAG
TTTGCAGATGAAGCTCTTCTTTCAAGAAACAAGGAAGGCAGCTACTCCAT
GGCTGTCACATCGCAGATCGATTCTTCAATACTTTGTGGAGCTTTTAGTC
ACCATGTCCAATGCGTGCGATGCTCAGGTGCGCCTTCAGTCTATTTAATG
CCTGGGTAGACGATGTATGATTTGATGGCTATGGGAGCTGGCATCTCTTT
GCCCGAGCCCCAACGCTTGCAACGTGTGGCTTAAACGTATCTGACCTGCG
ACTGATTTGAGTTGGTCCCCCTCCGAAGCCCGTTCTGTTTTTTTTTCTAA
CGAAGAACACTCCCTGAAAACGTGTGCTGTGCTGCAAACGGGTCATCATC
CCCACGAATTTACCCTTTGCCCTGCTGTAGACGGAGGGAGTTTTTAACGT
CGCCAAAAAGCTGACGGAAAAGCTCCGCAAGAAGGGCATGGTGACGAAGA
AAGAAAAAGCCGGCGGCGCAGCTGGCGGAGGGGCGATTGGAGGCCGCGAA
GCCGAGGGGGGCGGGGACAGCGACTACGAGATCCGCGAGGACGGCGTGGA
GCTGACGGAAAAGGACGTGGTGCGGAGAAAAACGGGAACTTGGGCAACTG
TGACGGAAGACGCACCCGTGGTCGACGGAGAGGGCAAGCAGGGCGATGGC
GAGGGATCTGCTTGACGCCGATGAATTGAGATGCCGTGCTTGTTTTGCGG
TGCCTGTTGTCGTTGTTGTGAATACAGGAACTGGAAAAAATGGCAGCAGC
AATCGGGTAGCGGGGCAAAAGCGGGAGTGCGTGCGGGGGATGGAGATAGT
TTTTGTTGGTTGTGGGTCCACATGTTCGGGCTCCGTGCACTCGCAGCTGT
CGAATCACACTTGGTGACAGGTTGACCAGACGGGAGAACGCTGAGGGCGG
AGGTGTGGCGGGGAATTCTGGACATTGGTATAACCATCTCTTTGTGCCAC
GCTCGTCCGTGCTTTTGTATGTTTACCTACAGTCGCAGCAGTAGTGATGT
TTTAGTCATTAGGAGTGTGCGGAGAGCGATGAATGTATCGTACCGCGTGC
GTGGGCATGTGTTGGCGGGATTTATGTCAGCGTCGCGCTACGTTGCAATC
TGTAAGCAGCTGAATTTTAAGTAGTTGAAGTTGTGTTTTCTGAGGAAGTG
GTAGGCCTTAAGGACGGCGGTTCATGTTCCGAAGAGAACCGGGACGTTGC
ATGCTCCAAACCCGAACTCAATTTGGCGTTCCGTACCTGGTCCGGCACGG
TAATCTTCCGTGTGTGCGTATGAGTATAGTTTTCCTTCACAAACACGGAT
AGATGTAATCTCCGCTGGCTAGTCATTTAGTTTTGATTCGCCTCTGTAGA
GAACCCTATTTTGCACGCTCCGTACGGTGGAGCCTTTGCTCAACATGTTT
GTGTATCATCTTTGCGTGGTTTGATGCACGCTTGAGCGACCCTCTTGTTT
CCATCAAAAGCCCCTTCGCTGAGAGACTAACAATCGCAAAAACCGATTTT
TTTTCTAGTTTGTCGGTGAGGGCCAGCACCCTGCTCTCAGCTGTGCGGAG
ATGCGCATGTTTTTCCC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig885:50530..61646- >mRNA_P-littoralis_Contig885.11.2 ID=mRNA_P-littoralis_Contig885.11.2|Name=mRNA_P-littoralis_Contig885.11.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1377bp|location=Sequence derived from alignment at P-littoralis_Contig885:50530..61646- (Pylaiella littoralis U1_48)
ATGCTCTCCAAAAACAAAAACAGCCAACACACCAGATCACGAACATCCGT
AAGGTTGATGGAGGACAGAAGCAGCGACACGCCAAGCACGAAGCCGGTAG
TAGCGGCAGAGCATGAAGCCGCTGGTGAAGCAGGTGTGCCGTTGTTGAAG
AAACCAGCTTTCAAGAAGCCGGCTTTCAAGAAGCGGGTGCCTGCTGCCGG
AGGTTCAAGAGGCGGTCTGCGCAACAACAAACGACCAAGGCCGGCAACAG
CAGCAGCAGCAGCAGACAAGGGTCAGGGTAAGGGTGACAACAGCAGTAGC
AGCAGCAGCGAAGACGATGTTTCCGTGGTGAAGCTGGACAAGAAGGCCAA
GAAGGGCGTGAACAAGTTTTCCACGGGAGGCGGGGGCGTCGGCGCGGAAG
CTCGAGCAGCCGCAAGGGAGGCGTTGGCCAAGGAAACTATGTCTGCCGGG
AGCCTGTTCGAGTCCTCGAGAACAGCCGTGCCGGTCAGCAACGCGGGAGG
GGCGACGCACTACACGGAGATCGACACTGAGGCCGACAGGGATGCCAGGG
CCATCCTGGAAAAAAACGTGCGTCTCAACGAGGAAGGGGCAACGACGGAC
AAGGACGGGCTGTACCATGGGCAGGCGGGATATAAAAACCACATCAAGAA
GAATGAGGCACAGATAGGGGGAAATAAACACACGGGAACCCAAGGCCCCA
TTCGAGCGCCAACCTTCCTGCGAGCCACCTGCCGGTTCGACTACCAGCCG
GACATCTGTAAGGACTACAAGGAGACCGGTTTCTGCGGGTTTGGCGACAG
CTGTAAGTTCTTGCACGATCGAGCGGACTACAAGTCGGGGTGGGCGATGG
AGCAGGAGTTTGAGGCTAAGGAAAAGAAGAGAAAAGAGAAGGAAGCGCTG
GGGGAGTGGGCGGAGGATGATGACGACGAGGAGTACCTGGTGGAGAGCGA
GGACGATCTTCCGTTCGCCTGCGTGATCTGCAGGCAAGGGTTCCGCGACC
CCATCGTGACCAACTGCGGCCACTACTTCTGCGAGCAGTGTGCCCGGGAA
CAGTACAGAACAAACCCTCGCTGCGCCGCGTGCGGGAAACAGACGGAGGG
AGTTTTTAACGTCGCCAAAAAGCTGACGGAAAAGCTCCGCAAGAAGGGCA
TGGTGACGAAGAAAGAAAAAGCCGGCGGCGCAGCTGGCGGAGGGGCGATT
GGAGGCCGCGAAGCCGAGGGGGGCGGGGACAGCGACTACGAGATCCGCGA
GGACGGCGTGGAGCTGACGGAAAAGGACGTGGTGCGGAGAAAAACGGGAA
CTTGGGCAACTGTGACGGAAGACGCACCCGTGGTCGACGGAGAGGGCAAG
CAGGGCGATGGCGAGGGATCTGCTTGA back to top
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