prot_P-littoralis_Contig884.25.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig884.25.1
Unique Nameprot_P-littoralis_Contig884.25.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length578
Homology
BLAST of mRNA_P-littoralis_Contig884.25.1 vs. uniprot
Match: A0A6H5L5B7_9PHAE (Dymeclin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B7_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 4.620e-47
Identity = 222/425 (52.24%), Postives = 240/425 (56.47%), Query Frame = 0
Query:  146 AAEGLLDLQLEGVGLLLVLLGTQAYGPPPASWNSSPRAXXXXXXXXXXXXXXXGIPDNVFLDALLREASSGVG----RSRGWGTALPRAVFGWFVRRPAAPLGSAASALLNALRAPXXXXXXXXXXISFRRSSAD--TAVDGHLYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRRQPHE----TYRAALVFLVSSALLQLYVATVRGLFSVVGGGPGPARGSSGS--LLPGRGGEEXXXXXXXVTEAPGGAPKEPGEWEGHLTVPSKTASGGSXXXXXXXXXXXXXXXXXXGKGRYPEKVSPLADRGVLLLLVLLRNRGRNNPFRAAVASCVDAELDDNLPSGGGFGSSVGRGGEVRTPATDAAVATGSFGSSAAVAAPVWRSPSATAAAAAAPMRVAFRGLFEAFASTLEASQARS 558
            + EG  DLQLE VGLLLVLLGTQAYGPPP +W SSP  XXXXXXXXX         DNVFLDAL             R  GWG ALPRAV GWFVRRPAAP GSA+SAL+NAL             I FRRS A      DG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            Y  ALV LV+ ALL  +V T+RGLF +VG              LL G G          VTEAPGGAPKEPGEWEG  +       GG XXXXXXXXXXXX         R  +K+SP+ADRGVLLLLVLL NR R+N F AAVA+ VDA+L+DNLP GG FG                                            A  MRV+FRGLFEAFASTLE   + S
Sbjct:  256 SVEGFSDLQLEAVGLLLVLLGTQAYGPPPPTWGSSPGRXXXXXXXXXV--------DNVFLDALXXXXXXXXXXXXXRPHGWGCALPRAVLGWFVRRPAAPPGSASSALVNALWT-KPPPSSRRVSIPFRRSLAGGGAIADGQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAYPGALVLLVARALL--HVVTLRGLFGMVGXXXXXXXXXXXXXLLLDGDG----EKGEAEVTEAPGGAPKEPGEWEGRWSQAMDDGEGGCXXXXXXXXXXXXR--------RPRKKISPIADRGVLLLLVLLHNRSRSNAFLAAVATFVDADLEDNLP-GGSFGXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXATRMRVSFRGLFEAFASTLEGPSSSS 640          
BLAST of mRNA_P-littoralis_Contig884.25.1 vs. uniprot
Match: D8LKU0_ECTSI (Dymeclin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU0_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 4.230e-24
Identity = 110/225 (48.89%), Postives = 119/225 (52.89%), Query Frame = 0
Query:  328 YRAALVFLVSSALLQLYVATVRGLFSVVGGGPGPARGSSGSLLPGRGGEEXXXXXXXVTEAPGGAPKEPGEWEGHLTVPSKTASGGSXXXXXXXXXXXXXXXXXXGKGRYPEKVSPLADRGVLLLLVLLRNRGRNNPFRAAVASCVDAELDDNLPSGGGFGSSVGRGGEVRTPATDAAVATGSFGSSAAVAAPVWRSPSATAAAAAAPMRVAFRGLFEAFASTLE 552
            Y  ALV LV+ ALL  YV T+RGL  +VGG           LL    GEE       VTEAPGGAPKEPGEWEGH +       G  XXXXXXXXXXX          R  +K+SPLADRGVLLLLVLL NR R N FRAAVAS VDA+L+DNLP GG FG                                            A  MRV+FRGLFEAFASTLE
Sbjct:   12 YPGALVLLVARALL--YVVTLRGLIGMVGGXXXXXX----XLLLDGDGEEGEAE---VTEAPGGAPKEPGEWEGHWSPAMDDGEGXXXXXXXXXXXXXR---------RPRKKISPLADRGVLLLLVLLHNRSRGNAFRAAVASFVDADLEDNLP-GGSFGXXXXXXXXXXXXXXXXXXXXXXXXX-------------------ATRMRVSFRGLFEAFASTLE 198          
BLAST of mRNA_P-littoralis_Contig884.25.1 vs. uniprot
Match: D8LKU1_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU1_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.530e-13
Identity = 65/108 (60.19%), Postives = 68/108 (62.96%), Query Frame = 0
Query:  144 VVAAEGLLDLQLEGVGLLLVLLGTQAYGPPPASWNSSP-----RAXXXXXXXXXXXXXXXGIPDNVFLDALLREASSGVGRSRGWGTALPRAVFGWFVRRPAAPLGSA 246
            V++ EG  DLQLE VGLLLVLLGTQAYGPP  +W S P       XXXXXXXXXXXXXXX                    R  GWG ALPRAV GWFVRRPAAP GSA
Sbjct:  126 VLSVEGFSDLQLEAVGLLLVLLGTQAYGPPXXTWGSXPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPHGWGCALPRAVLGWFVRRPAAPPGSA 233          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig884.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L5B7_9PHAE4.620e-4752.24Dymeclin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID... [more]
D8LKU0_ECTSI4.230e-2448.89Dymeclin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
D8LKU1_ECTSI1.530e-1360.19Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 559..578

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig884contigP-littoralis_Contig884:80668..84363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig884.25.1mRNA_P-littoralis_Contig884.25.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig884 80668..84364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig884.25.1 ID=prot_P-littoralis_Contig884.25.1|Name=mRNA_P-littoralis_Contig884.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=578bp
SQLRAQFYSRGRRRDADEGTAGGGGGGGGGRGRGDAVIVHGIGRGGEARG
GDGFGGGGGGAMITEGQEEEEEEAAADHKRGTAGATGAGAVAGGSAASTD
PVVALLASLMALLCATEDGMEGGGGIGGTGRRRKGRGGRVGGGVVAAEGL
LDLQLEGVGLLLVLLGTQAYGPPPASWNSSPRAAHGGGQQCATGGGGGGI
PDNVFLDALLREASSGVGRSRGWGTALPRAVFGWFVRRPAAPLGSAASAL
LNALRAPPPPSSRRRRSISFRRSSADTAVDGHLYPSSSSATVHSPPAPPS
TNDVSGASNSDSTTASSGGDRRQPHETYRAALVFLVSSALLQLYVATVRG
LFSVVGGGPGPARGSSGSLLPGRGGEEGEEEEEEVTEAPGGAPKEPGEWE
GHLTVPSKTASGGSSSGGGGGGGGGAGDGGAGGKGRYPEKVSPLADRGVL
LLLVLLRNRGRNNPFRAAVASCVDAELDDNLPSGGGFGSSVGRGGEVRTP
ATDAAVATGSFGSSAAVAAPVWRSPSATAAAAAAPMRVAFRGLFEAFAST
LEASQARSGGGGGGVSGWGNGDAGGGGG
back to top