prot_P-littoralis_Contig884.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig884.3.1
Unique Nameprot_P-littoralis_Contig884.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length242
Homology
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: D8LKV0_ECTSI (High mobility group protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV0_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 4.840e-122
Identity = 192/243 (79.01%), Postives = 209/243 (86.01%), Query Frame = 0
Query:    1 MSYEDEEHIGYEGEGGLEEGGYDE--VGGLAGGASATPSKRRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAMTVFKDGGADALASHMAARGEADAAAAQQYDDNEEGGERT 241
            M YE EEH+ Y+G+GGL++G YD+   G                 AYKKAP+APRRGRSAYVLFSMEARE+VKN LPEGSKVTEVMKGIAA+WRELSETDK EWTAKAA DKDRYEQELS YDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDT+RYREAMTV+KDGGADALASHMAARGE D A  + Y+++ +GG+RT
Sbjct:    1 MQYEGEEHVAYDGDGGLDQGHYDDGSEGXXXXXXXXXXXXXXXXXAYKKAPDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKDGGADALASHMAARGETDGAVGK-YEEDGDGGDRT 242          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: F0W3U4_9STRA (High mobility group protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3U4_9STRA)

HSP 1 Score: 180 bits (457), Expect = 3.660e-53
Identity = 87/164 (53.05%), Postives = 124/164 (75.61%), Query Frame = 0
Query:   39 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAM 202
            +++KR  KKAP AP+RG+S Y+LFSM+ RE++K+ +P  +KVT+VM+ IA  W ++SE +K  W + A +DK RYE+E+++YDGPL+VPNKRAKKDP APKRA SAFL +SQ MRP+L++  P+ KN D+SK LG+ W++ +D +K PY  K  +D  RY+  M
Sbjct:   24 KKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREM 187          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: A0A835ZA26_9STRA (High mobility group box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA26_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.230e-52
Identity = 108/215 (50.23%), Postives = 138/215 (64.19%), Query Frame = 0
Query:   33 SATPSKRRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRA---------------------KKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYRE---------------AMTVFKDGGAD 211
            S  P ++RK R +KKAP AP R RSAYVLFS+  R++VK GLPEGSKVTE+M+ +AA WRE++E  ++EW AKAA DK RY+ EL+ Y GPLK+PNKRA                     KKDP APKR MSAFL++SQ MRPRL+E YP+AK  D+SK+LG++W RM  ++K  Y TKA  +   Y+                AM+ FK+ GAD
Sbjct:   97 SVRPPQKRK-RLFKKAPGAPTRARSAYVLFSLSKRQEVKAGLPEGSKVTEIMRRVAALWREMTEDQRSEWHAKAAEDKQRYQDELTTYQGPLKIPNKRAHKAMFEQPQPAYEANGRAKRAKKDPRAPKRPMSAFLYYSQVMRPRLKEQYPDAKAQDVSKILGEQWARMGPDDKKVYNTKAEHEIAIYKVSRGALCVTCAAVHALAMSHFKEHGAD 310          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD)

HSP 1 Score: 176 bits (447), Expect = 1.010e-51
Identity = 87/164 (53.05%), Postives = 121/164 (73.78%), Query Frame = 0
Query:   39 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAM 202
            +++KR  KKAP AP+RG+S Y+LFSM+ RED+K  +PE +KVT+VM+ IA  W ++S+ DK  W A A  DK RYE+E+++YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W++ +DE+K P+  K   D  RY+  M
Sbjct:   21 KKRKRLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREM 184          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: A0A3R7KJP5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJP5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.040e-50
Identity = 87/164 (53.05%), Postives = 119/164 (72.56%), Query Frame = 0
Query:   39 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAM 202
            +++KR  KKAP AP+RG+S Y+LFSME RE++K  +PE SKVT+VM+ IA  W ++S+ DK  W   A  DK RYE+E+++YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + +DE+K P+  K   D  RY+  M
Sbjct:   24 KKRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREM 187          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 4.930e-50
Identity = 85/164 (51.83%), Postives = 120/164 (73.17%), Query Frame = 0
Query:   39 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAM 202
            +++KR  KKAP AP+RG+S Y+LFSM+ RE++K  +P+ SKVT+VM+ IA  W ++++ DK  W A A  DK RYE+E+++YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + +DE+K P+  K   D  RY+  M
Sbjct:   46 KKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREM 209          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: M4BDC0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BDC0_HYAAE)

HSP 1 Score: 172 bits (437), Expect = 8.280e-50
Identity = 86/164 (52.44%), Postives = 117/164 (71.34%), Query Frame = 0
Query:   39 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAM 202
            +++KR  KKAP AP+RG+S Y+LFSME RE++K  +PE SKVT+VM+ IA  W ++ + DK  W   A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + +DE+K P+  K   D  RY+  M
Sbjct:   53 KKRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDDDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKVDRARYKREM 216          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: A0A7S2UYP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYP1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.120e-49
Identity = 86/162 (53.09%), Postives = 119/162 (73.46%), Query Frame = 0
Query:   38 KRRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYR 199
            K+++KR++KKAP AP+R RS Y+LF+ E R +VK  L E  KVT+VMK +AA WR+L E  + E+ AKA +D+ R+++E+S Y+GPLK+PN+RAKK+P APKRAMSAFLHFS   RP+L+E  P+  ++ +SK+LG  WN +  E K PY  K+  D  RYR
Sbjct:   17 KKKRKRSHKKAPGAPKRARSPYILFASEKRAEVKARLGENCKVTDVMKAVAALWRQLDEEGRKEFVAKAEMDRARFQEEMSIYEGPLKIPNRRAKKNPNAPKRAMSAFLHFSIEYRPKLKEQNPQLTHLQISKLLGDTWNALPQETKDPYVEKSRIDNQRYR 178          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: A0A1V9ZRB9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRB9_9STRA)

HSP 1 Score: 176 bits (445), Expect = 5.190e-49
Identity = 94/199 (47.24%), Postives = 134/199 (67.34%), Query Frame = 0
Query:   39 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAMTVFKDGGADALASHMAARGEADAAAAQQYDDNEEG 237
            ++K+R  KKAP AP+RG+S Y+LFSM+ RE++K  +P  SKVT+VM+ IA  W ++SE +KA W   A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  +P+ KN ++SK LG+ W + +  +K P+  K  +D  RY+  M  +         S+ + R   +A AAQQY+ ++ G
Sbjct:   19 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIAEAWSKMSEDEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHPDMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEWN--------SNKSEREFQEAQAAQQYNPSQYG 209          
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC)

HSP 1 Score: 169 bits (429), Expect = 5.200e-49
Identity = 84/164 (51.22%), Postives = 117/164 (71.34%), Query Frame = 0
Query:   39 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKAEWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYREAM 202
            ++K+R  KKAP AP+RG+S Y+LFSM+ RE++K  +P  SKVT+VM+ IA  W ++SE +KA W   A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + +  +K P+  K  +D  RY+  M
Sbjct:   20 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREM 183          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig884.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV0_ECTSI4.840e-12279.01High mobility group protein n=2 Tax=Ectocarpus Tax... [more]
F0W3U4_9STRA3.660e-5353.05High mobility group protein putative n=2 Tax=Albug... [more]
A0A835ZA26_9STRA1.230e-5250.23High mobility group box domain-containing protein ... [more]
K3WVY6_GLOUD1.010e-5153.05Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7KJP5_9STRA1.040e-5053.05Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A5D6YAG9_9STRA4.930e-5051.83Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
M4BDC0_HYAAE8.280e-5052.44Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
A0A7S2UYP1_9STRA1.120e-4953.09Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9ZRB9_9STRA5.190e-4947.24Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067C9M6_SAPPC5.200e-4951.22Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 82..104
score: 25.28
coord: 153..171
score: 26.71
coord: 171..190
score: 40.0
coord: 190..210
score: 22.05
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..241
NoneNo IPR availablePANTHERPTHR48112HIGH MOBILITY GROUP PROTEIN DSP1coord: 128..230
NoneNo IPR availablePANTHERPTHR48112:SF22HIGH MOBILITY GROUP PROTEIN DSP1coord: 37..121
NoneNo IPR availablePANTHERPTHR48112HIGH MOBILITY GROUP PROTEIN DSP1coord: 37..121
NoneNo IPR availablePANTHERPTHR48112:SF22HIGH MOBILITY GROUP PROTEIN DSP1coord: 128..230
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 138..202
e-value: 2.21415E-19
score: 77.2829
NoneNo IPR availableCDDcd01390HMGB-UBF_HMG-boxcoord: 52..118
e-value: 5.97789E-16
score: 68.0381
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 137..207
e-value: 3.8E-19
score: 79.6
coord: 51..122
e-value: 1.2E-16
score: 71.4
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 138..205
e-value: 1.3E-19
score: 70.3
coord: 52..120
e-value: 7.6E-15
score: 55.1
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 52..121
score: 16.75687
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 138..206
score: 17.757122
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 128..220
e-value: 2.1E-23
score: 84.5
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 37..121
e-value: 2.9E-21
score: 77.7
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 129..208
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 45..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig884contigP-littoralis_Contig884:10503..14662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig884.3.1mRNA_P-littoralis_Contig884.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig884 8928..15388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig884.3.1 ID=prot_P-littoralis_Contig884.3.1|Name=mRNA_P-littoralis_Contig884.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=242bp
MSYEDEEHIGYEGEGGLEEGGYDEVGGLAGGASATPSKRRKKRAYKKAPN
APRRGRSAYVLFSMEAREDVKNGLPEGSKVTEVMKGIAARWRELSETDKA
EWTAKAALDKDRYEQELSNYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQ
SMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTMRYRE
AMTVFKDGGADALASHMAARGEADAAAAQQYDDNEEGGERT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf