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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1227 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 879 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791771.51533-UTR-P-littoralis_Contig884:44550..44623 | 1680791771.51533-UTR-P-littoralis_Contig884:44550..44623 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig884 44551..44623 - |
| 1680791771.5586245-UTR-P-littoralis_Contig884:47609..47884 | 1680791771.5586245-UTR-P-littoralis_Contig884:47609..47884 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig884 47610..47884 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791771.532267-CDS-P-littoralis_Contig884:44623..45429 | 1680791771.532267-CDS-P-littoralis_Contig884:44623..45429 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig884 44624..45429 - |
| 1680791771.546248-CDS-P-littoralis_Contig884:47536..47609 | 1680791771.546248-CDS-P-littoralis_Contig884:47536..47609 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig884 47537..47609 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig884.11.2 >prot_P-littoralis_Contig884.11.2 ID=prot_P-littoralis_Contig884.11.2|Name=mRNA_P-littoralis_Contig884.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=293bp
MATNVVPEQPRAFRIHQIPAQPVCGQNPSIQSAGATTKIHTLVAKPRTAA
AAEAAAKVVVEAATPCSSSLPSSPSSRSLSASSPNQPMAAPTVAVTAAGV
ASSAPDRFCSPRKRSRQHRQQQQQQPYLQQGPLPSSRLLRRQDTGSTGSS
SASGGTSGGGGGGGGGSSFESTKWAVCDKENIDPRTGQLVPRHPVSPSSP
LSSLGVGGPGMTATTSTLSTTDGGRSKKRLLRGRERGEAKPRSAAVGVAL
SKKPSREPLRELWNRRGGGSGGGGGGNPPRVSLDALHLRVMR* back to topmRNA from alignment at P-littoralis_Contig884:44551..47884- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig884.11.2 ID=mRNA_P-littoralis_Contig884.11.2|Name=mRNA_P-littoralis_Contig884.11.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3334bp|location=Sequence derived from alignment at P-littoralis_Contig884:44551..47884- (Pylaiella littoralis U1_48)
CTGTACAGACTCGAGAGCACATCATATCGCCTCAGGGAACGCATTTTCTT
CCTTGCGCTGCTTCACGTTGTGCAAAATATATCGTAAGTCGGTGTGAGCG
AGCCTTGCCCGCGTGCGTAACCGCTTGTGAGTTTAGGTTGTCCAACCTTT
CTCATCCAGGTTGTTCAACATTGGACAGCCTTTTTTGTCCAGGTCGTCCA
ACGTTGCACAACCTTTCGCCCATCATCCCGCGCCCAGGGAACACAACAAC
TCATAACCACAACATCGATTGTGCGATGGCTACCAACGTTGTACCGGAGC
AGCCAAGGGCCTTCAGGATTCATCAGATCCCGGCACAGCCAGTTTGCGGT
GAGTGAGTTGAGCGAGCCGCCGCGGCGATGTAGTAAGATGGGCCTACAAG
CAGAAACCCTTTGAAACAGAGTTTTTTTTCAAATTTTAGCAGCAACGGCA
ACGGGTGCACCTTCTCTTGTGCAGTAGTTGTGCGATCACCTTTGCGTACC
TTGTTGCCTGAATGATATCGCACGTGGACATTTACGATCAGCTGTTGCCT
TGATTAAAAGCGGCTGTCCCGCTTCGTCCATGTCATGCATATTTGAAAGA
CAACCTAAGGTTCCATACATGAATCATAAGCTCTCTTCCCTCCCAAAGAG
TATTTACTTTGTACAAGTATTCACTCAGTACCTGGTGGTGAATATTTAGG
GCTGTTCCGTACGTCGTACAGGAGTACCGGGTGCGGGCGCCGCGCCCGCC
ATCGTCGTGGGTTTGACCCGAAAGCGATCATACGGACAGCATTTTCCACT
GCATTTTACTGCTGCACCTTGCTGTGAACAGTTCGACAGCAGTGCTTGTA
AAGTATACTGCTGCTGTATTTCATAAAAGACGTTTGTCGTTTATCATACC
CTGCTGGAGCCGCTACCGGCTCCCGCTTCTGCGCCGCCGCGTGCACAGCT
GAATGAAGCGGTTCTTGAGGGTGAGGACGATCTGTCTACCGTACAGCAGT
AACCATGGTTATGCTTCACATGCCGCACAATCAATACCCTGCTGTGACAC
AAACGAATAAGATTACACATCGTTGTTCATTTCCTGGCCTGAACTGCGAC
GTGAACACAACAGCACAACAGTGAACCGAGCTGTGGCGAACGCGTGCGTA
CCTAACGAAGCACCGTAATTCCCTTTGGTTTTCCTCCTCTACACTTTCAC
ACACATACACACACACACACACCGTTCCCTCCGGAAAAAAAGAACGGCCT
GAGACCGGATTTAATGGGGACGGCAAAATTCGTACAAATGCAATCTTGTC
ACAAAATGCTCGTCAGCATTTTGGAGCCGAATGTTCGTTTCCCAAACATT
TCGTACCGCGGCTTGTGGTCACAGAACTTTTTTTTTCCCTTCTTGTATTT
TTTATTTCTTCTGTTGTCTTTTTTTTTTATTTCCGGTGGTATGGGTCTGC
GGCTGGCTGTGTCGACGAATCTTACGGACAAAAATAACCACTGCGCCATG
GAATCTGAACGTCGAGAGGCCGTAGAGAGCTCGTAGCAACTCTCTTGTCA
CCGTGTCAACACCTTGACCACTGGTTGGTGGTTGAAGCGTGCCAGACATG
CAAAAAAAATGAGCAACGGTTCGTTGATTGTATGAGATGGAGTCACGTGC
GTGTGTTCTGTCTTCCCAACCGAGAGCAGAGCCTTTCACGGAGAGATGAA
ACATACCACGTTCCACGTGACCTATATGAAGAGCCGCTCCCATTTATTTT
CTTGGAGCCTGGCGGGTCCACGTGTGCCCGTCACCAACCCACAGCCAAAC
AAAGTGTTTGTCAAGGTGATTTCAAGGGTTTCTTTGAGCCCTCTCTGTCG
TGCTTGCACGTGTGTACCGTTGGTATGTGGCTGGTGTATGCCAAGCTCTA
AGCCGTGTGTGTGTCATCTGAAGGTCGTGTTTGCGCTTCGTGTTGGTGTG
TTGGGTGTCGGGACAATAAGCGGACCGACTTTTAATTCCCGCCTCGTCAG
GATTTTCAAGACTGCCGAGTTTGGGAAATGTTCATCAAACATTTCCCAAA
AAGGGCCGGAATCGGCCGGTTGGGAAATCTTCGGCCGCATTTTCAGAAGG
ATTTTTATCCATAAAAAGTGAAAAAAAATGCTCGTCGTCGAATCCTGGCC
GAAGATTGCATTTTGATGAATTTTTCTGTCTTCATTAATTCCGGTCTGAG
AGAAGGAAAAGTTTGAACCTACCCCCGGGAGGAACTTGCCGGTAATTTGA
AAGAAATGAGAAATCCCCCCCTGACACGGTTTCACCGTGGAGCAACTTGT
TTTTCCGTGCGCCGCCCCTCGACCATGCTGGCTCTTGTGCTAACCATAGC
ATACCCCCACCCCCTCCCCCACGTCCCGTTCCACCACAACGCTGTTTTGG
CACCGATATATATTTTTTGTAATACGATGTCATATGCTTCATACATCACG
ACCAGGACAAAATCCATCCATCCAATCAGCAGGAGCCACGACGAAGATCC
ACACCCTCGTCGCGAAACCAAGAACAGCAGCGGCAGCGGAGGCGGCGGCG
AAGGTGGTGGTGGAGGCGGCCACCCCTTGTTCTTCATCGCTGCCATCGTC
GCCGTCGTCGCGGTCTTTGTCAGCTTCTTCTCCGAACCAACCGATGGCCG
CACCGACCGTCGCCGTCACCGCCGCCGGCGTCGCCTCTTCCGCTCCCGAC
CGCTTCTGCTCACCGAGGAAACGCAGCAGGCAGCATCGGCAACAGCAGCA
GCAGCAGCCGTATCTGCAACAGGGGCCGCTGCCGTCGTCGAGGTTGTTGC
GGCGGCAGGACACTGGTAGCACCGGTAGCAGTAGCGCCAGTGGCGGCACC
AGTGGTGGCGGTGGTGGTGGCGGCGGCGGTAGCAGCTTCGAGAGCACCAA
ATGGGCTGTCTGCGACAAGGAGAACATCGACCCAAGAACCGGGCAGCTCG
TACCCCGCCACCCAGTCTCGCCCTCGTCACCGCTCTCTTCGCTAGGTGTC
GGCGGTCCAGGAATGACGGCCACAACGTCCACTCTCTCCACCACCGACGG
TGGGAGGAGCAAAAAGCGCCTGTTGCGCGGCCGTGAACGAGGAGAAGCCA
AACCGCGGTCAGCGGCGGTGGGGGTAGCGCTCTCGAAGAAGCCATCCAGA
GAGCCGCTGAGAGAGCTCTGGAACAGACGCGGCGGCGGCAGCGGCGGCGG
CGGCGGCGGTAACCCTCCCCGCGTTTCCCTGGACGCGCTCCACCTCCGCG
TGATGCGATGACTTTGTGACTCGTCTATGACATGTACGAAAAAATTGGGA
AGATGAGGAGGGGGGTACGACGGACCGGCGCGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig884:44551..47884- >mRNA_P-littoralis_Contig884.11.2 ID=mRNA_P-littoralis_Contig884.11.2|Name=mRNA_P-littoralis_Contig884.11.2|organism=Pylaiella littoralis U1_48|type=CDS|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig884:44551..47884- (Pylaiella littoralis U1_48)
ATGGCTACCAACGTTGTACCGGAGCAGCCAAGGGCCTTCAGGATTCATCA
GATCCCGGCACAGCCAGTTTGCGGACAAAATCCATCCATCCAATCAGCAG
GAGCCACGACGAAGATCCACACCCTCGTCGCGAAACCAAGAACAGCAGCG
GCAGCGGAGGCGGCGGCGAAGGTGGTGGTGGAGGCGGCCACCCCTTGTTC
TTCATCGCTGCCATCGTCGCCGTCGTCGCGGTCTTTGTCAGCTTCTTCTC
CGAACCAACCGATGGCCGCACCGACCGTCGCCGTCACCGCCGCCGGCGTC
GCCTCTTCCGCTCCCGACCGCTTCTGCTCACCGAGGAAACGCAGCAGGCA
GCATCGGCAACAGCAGCAGCAGCAGCCGTATCTGCAACAGGGGCCGCTGC
CGTCGTCGAGGTTGTTGCGGCGGCAGGACACTGGTAGCACCGGTAGCAGT
AGCGCCAGTGGCGGCACCAGTGGTGGCGGTGGTGGTGGCGGCGGCGGTAG
CAGCTTCGAGAGCACCAAATGGGCTGTCTGCGACAAGGAGAACATCGACC
CAAGAACCGGGCAGCTCGTACCCCGCCACCCAGTCTCGCCCTCGTCACCG
CTCTCTTCGCTAGGTGTCGGCGGTCCAGGAATGACGGCCACAACGTCCAC
TCTCTCCACCACCGACGGTGGGAGGAGCAAAAAGCGCCTGTTGCGCGGCC
GTGAACGAGGAGAAGCCAAACCGCGGTCAGCGGCGGTGGGGGTAGCGCTC
TCGAAGAAGCCATCCAGAGAGCCGCTGAGAGAGCTCTGGAACAGACGCGG
CGGCGGCAGCGGCGGCGGCGGCGGCGGTAACCCTCCCCGCGTTTCCCTGG
ACGCGCTCCACCTCCGCGTGATGCGATGA back to top
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