mRNA_P-littoralis_Contig881.10.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig881.10.2 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE) HSP 1 Score: 652 bits (1681), Expect = 3.280e-196 Identity = 684/1662 (41.16%), Postives = 847/1662 (50.96%), Query Frame = 1
Query: 166 GGSESETKRRGMGVIRRR--------AYHKKPSGFEHNDGFGERNSWNDKDDEEEGRFF---GTARRGHGRSRSSSRMCSRKEGDKGSSRRPALIFLAQAALSFVGMVVLPTQLAYEVLVRSTPSGGGNHLGAGAPPASFSLDVRAKSSWEIAAAARGLSPKAGEGGGEGRGGRRYLSDDGVVLVDGKNTAVAGDGEVAGVQNARVLQTAEENGDSFTYSTRTQFDLCSETDSELTEDALRAAIMDVFEVQQSQIEGSEGTVEQRESSEFCGDNRNEWTVAIRNTPTADKSAAVISGEQLELVRSPVFLDTLATSINNDADFAGSVTPEEFSYGSLGYIILYDEDQAETTAVSGGLSNDFVGFTGPDQWWPWWAWLLFGLGLLFCICPLAACIYRYKAGPPXXXXXXXXXXXXXMFG---KRGNKSGMGGS----DVDWEAEQFQKGGGVT-YGDKDEGPFNDAATGISTDSPRENLNASTMHTRDAAVIEPATSGEVGSGEWPDALESGVGVAGPTYTS--RYGSSAMKLHEGDEVASL--SEADRAAGVDPSR-QLERDTSVASSKPLMTSASFNPTAANVSPSRQSMPGA--ADSSGAIVSSFQDRAFQGSAGGSDAPQLVGGGPAALSRGLGAGAAAXXXXHLTSGPSGXXXXXXXXXXXEESDEDHVFISPESSPVEKADSSSSSGGMQSRGALSYRTGKDDGTPGGGSLDGKVAAWAEAEDDTGLSTAMVPGSGXXXXXXXXXXXXXXXXXX-----------GIPPSGRSSRDSSRHTME----GSGAGETRASXXXXXXXXXXXXXXXXGSTMLEEI--RQMTDDERQQVMQESEGARAASVLRGTTFKTPLQPDLERAITEEEQERRRVAVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---AGRVESSPAGMTPPSTTTSLIGKVGSFATNLGMGRFFG--MDAASAAADSSXXXXXXXXXXXXXEAEPITEEDFKAGPAE--GAVGAAGGVLVPEAA--GEVDAD-DVVPRAGVGSTAGAVPTIPEVEATS------------SPEVGAAAXXXXAXXXXXXXXXXXXXXR----------------------------SPRTDEAEAE------AEATAAASIEGKAPRGGVLSPEEKQAYSDNVDRTLEELPEIDEGGVSLPVSEILA----------------VPPSGTADAAD-----AMPDMGASAAVPSAXXXXXXXXXXXXXXXXXXXXXXXXLAMQQHQPATGSQTPALDMSR-VHYAEGSGMDLEELDSNVVSPIVATPPALLRPGVGAAARXXXXXXXXXXXRNNVSGSFVSSRSTSVTEDMMXXXXXXXXXXXXXXXXX-VSRTSSYIATGSSFEESLAQSQAASGRFLSSG------------NSALGGPAAPPAAAPIXXXGDGDGNPSSLAECLARAEETVGR-EHEKGLLYRQGPEGVAAAVAGEELPLPPXXXXXXXXXXXXXXXXXXXXSGARASGPADSGVGRVESLADILARADDGPGNLKETFKMLDDLDDRKSKRLQELTAAASADDADDETKARWRGSLAELFVKVDRAGNVLEFIDSPVQVSESSSASDGHA--------GALVSSESDSAAGSARQR-QAGPHDPQARPE 4719
GG + E RR +GV RRR S E G G R +K E+G+F+ G RG G KEG G RRPAL+F+AQA LSFVGMVVLPT++AY+VL++ P +H G + V+ + AG ++ RVLQT ++GDSFTY++RTQFDLC+ SEL EDALRA IMDVFEV+Q Q EG+ GTVE+RE +EFC D EWT+AI N P+ +SAAVIS Q+ELVRS F LA+S+ D SV P +Y SLGYI+LYDEDQA TTA S L +DFV F GPDQWWPW LLFGL LL CICPLAACIY Y+ G MFG + G + +G + DW +Q++ YGDKD FNDAATGIS SP+E + S A V++ A S +V SGEWP+A+ESGVG G TYTS R G+S++ +GDE ++ +EADRAAGVDPSR + + TS S KPL+TS SFNP A+ R +PG DS+ ++ SS + R A + + V G + L L SGPSG EE +D E + + A+SYRT DG+ S A+ E XXXXXXXXXXXXXXXXXX G+PPSGRSS +SS S A +RA+ S+ +E+ R +T++E Q ++++E ARAASVLRG++FKTPLQPDLERAI EEQERRR AVQA E V SSPA T +GKV + +GM R FG A + +A S+ E E D KA P++ A GA GV PE A G+ AD D G +T G +P + E E+ +P AA AXXXXXXXXXXXXXX + +E E +EA AA A L PEE +AYS+NVDRTLE LP ID+GGVS+P+SE+LA VPP A+P MGAS XXXXXXXXXXXXXXXXXXX LAM Q Q GS +P+LDM+R +H AE GM L+E+D+ + SPIVATPPALLRPGVGA RN+ SGS++SSRSTS+TED++ VSRTSS++ATGSSFEE+ AQSQAA RFL+ G +S G A A P XXXG SS+AE LARAEETV R +HEKGLLYRQGPE VAAA+ GE+ PLPP S SG S RVE+LA++LARA+DGPGNLKE F++ LDD +++RL++L AAASA+DADD+TK RWRGSLAEL +KVDR+GN+ + +D SES+SASDG + G +SSE+DS +GS Q QA PQARPE
Sbjct: 8 GGGDVEMPRRAVGVRRRRHDESLKQRQVASSSSWCEDRFGEGSRRGGRNKSSNEDGQFWRCGGDQVRGSGGG---------KEGTGG--RRPALVFVAQAVLSFVGMVVLPTRVAYDVLLQ--PRVFESHRGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGLVSS--KKAGWRSRRVLQT--DDGDSFTYTSRTQFDLCAAPGSELEEDALRAGIMDVFEVEQEQTEGTTGTVEKREVTEFCDDGSEEWTIAIGNEPSDTQSAAVISAGQMELVRSSEFTTLLASSLE---DSNLSVNPAGLTYSSLGYIVLYDEDQAVTTANSDSLDSDFVAFRGPDQWWPWXXXLLFGLVLLCCICPLAACIYYYRPGLAGPPSPSGAGGGPGMFGGSTRGGTRKEIGRGXXXXNADWITQQYEXXXXXXGYGDKD---FNDAATGISVYSPQEEVATSASGGDSATVVQAAESPQVASGEWPEAIESGVGTTGVTYTSTSRGGASSVASQQGDEATAVQSAEADRAAGVDPSRREHDTTTSALSIKPLVTSGSFNPAASGSGDGR--VPGGYMGDSAASLESSQKSR----EASWGVSRKTVTPGDSGLLEATEEADEGDSPAPLISGPSGRTLGSAAAALGEEDSQD------EDERIGSXXXXXXXXXXXXQSAVSYRTA--DGSASVQSTSTLAPLDAKTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPGLPPSGRSSSNSSSRIQSVDHPASRAVRSRAAS---------------NSSSADELSQRDLTEEEHQMRVEDAEAARAASVLRGSSFKTPLQPDLERAIAVEEQERRRQAVQAVEASLAPDSGTGAAEPVDLGSPADLPAEAVTAAIAASATGDTEKEGGASVSSSPA-------ATGFMGKVVA-GMGMGMSRIFGPRSPANTPSAASAAATAAADGAEPTVEVEATAAGDSKAVPSQDVAAAGAVAGVPPPEQAQAGDAGADADAAEGEGPAAT-GVLPPMDEGESEXXXXXXXXXXXXXAPPAAIAAAAAGAXXXXXXXXXXXXXXXXXXXXXXXAGVADSGXXXXXXXXDQKAGASSREEGRPEQVLPSPSEAGAAXXXXXXAVPAAALGPEEARAYSENVDRTLEGLP-IDDGGVSMPMSELLARAELEASIEHPTPTPTVPPLSAXXXXXXXXXXAVPPMGAS--XXXXXXXXXXXXXXXXXXXXXXXPAGPRLAMVQ-QSVAGSPSPSLDMARFLHTAEEGGMTLDEVDACLASPIVATPPALLRPGVGAPRAPRSGGLLQ---RNSASGSYMSSRSTSITEDVISNNNLTEDDMSSDAQTTDVSRTSSFVATGSSFEENPAQSQAARSRFLAGGAXXXXXXXXXXXDSVASGAAPAAAMNPXXXXG------SSVAELLARAEETVTRGDHEKGLLYRQGPEAVAAALDGEKPPLPPGAAASLPRGIRGGAGTGGRSS---MSGGGSSTGERVETLAELLARANDGPGNLKEAFRL---LDDNEARRLEDLNAAASAEDADDDTKTRWRGSLAELMLKVDRSGNLRDILDIGSDTSESASASDGKSAGTXXXNRGGALSSETDSTSGSVSQTGQAAA--PQARPE 1587
BLAST of mRNA_P-littoralis_Contig881.10.2 vs. uniprot
Match: D7FU95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU95_ECTSI) HSP 1 Score: 597 bits (1538), Expect = 6.320e-179 Identity = 599/1514 (39.56%), Postives = 736/1514 (48.61%), Query Frame = 1
Query: 451 MVVLPTQLAYEVLVRSTPSGGGNHLGAGAPPASFSLDVRAKSSWEIAAAARGLSPKAGEGGGEGRGGRRYLSD---DGVVLVDGKNTAVAGDGEVAGVQNARVLQTAEENGDSFTYSTRTQFDLCSETDSELTEDALRAAIMDVFEVQQSQIEGSEGTVEQRESSEFCGDNRNEWTVAIRNTPTADKSAAVISGEQLELVRSPVFLDTLATSINNDADFAGSVTPEEFSYGSLGYIILYDEDQAETTAVSGGLSNDFVGFTGPDQWWPWWAWLLFGLGLLFCICPLAACIYRYKAGPPXXXXXXXXXXXXXMFG--KRGNKS-----GMGGSDVDWEAEQFQKGGGVT-YGDKDEGPFNDAATGISTDSPRENLNASTMHTRDAAVIEPATSGEVGSGEWPDALESGVGVAGPTYTS--RYGSSAMKLHEGDEVASL--SEADRAAGVDPSRQLERDTSVA--SSKPLMTSASFNPTAANVSPSRQSMPGA--ADSSGAIVSSFQDRAFQGSAGGSDAPQLVGGGPAALSRGLGAGAAAXXXXHLTSGPSGXXXXXXXXXXXEESDEDHVFISPESSPVEKADSSSSSGGMQSRGALSYRTGKDDGTPGGGSLDGKVAAWAEAEDDTGLSTAMVPGSGXXXXXXXXXXXXXXXXXX--------------------------------------------GIPPSGRSSRDSSRHTMEGSGAGETRASXXXXXXXXXXXXXXXXGSTMLEEI--RQMTDDERQQVMQESEGARAASVLRGTTFKTPLQPDLERAITEEEQERRRVAVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGRVESSPAGMTPPSTTTSLIGKVGSFATNLGMGRFFGMDAASAAADSSXXXXXXXXXXXXXEAEPITEEDFKAGPAEGAVGAAGGVLVPEAAGEVDADDVVPRAGVGSTAGAVPTIPEVEATSSPEVGAAAXXXXAXXXXXXXXXXXXXXRSPRTDEAEAEAEATAAASIEGKAPRGGVLSPEEKQAYSDNVDRTLEELPEIDEGGVSLPVSEILAVPPSGTADAADAMPDMGASAAVPSAXXXXXXXXXXXXXXXXXXXXXXXXLAMQQHQPATGSQTPALDMSRVHY-AEGSGMDLEELDSNVVSPIVATPPALLRPGVGAA-ARXXXXXXXXXXXRNNVSGSFVSSRSTSVTEDMMXXXXXXXXXXXXXXXXX-VSRTSSYIATGSSFEESLAQSQAASGRFLSSG--------------NSALGGPAAPPAAAPIXXXGDGDGNPSSLAECLARAEETVGREHEKGLLYRQGPEGVAAAVAGEELPLPPXXXXXXXXXXXXXXXXXXXXSGARASGPADSGVGRVESLADILARADDGPGNLKETFKMLDDLDDRKSKRLQELTAAASADDADDETKARWRGSLAELFVKVDRAGNVLEFIDSPVQVSESSSASDGHA--------GALVSSESDSAAGSARQR-QAGPHDPQARPE 4719
MVVLPT++AYEVL++ P +H G PP SL V + + + A EG GEG GGRR LSD DG DG + + + AG + RVLQT ++ SFTY+TRTQFDLC+ SEL EDALRA IMDVFEV+Q Q EG+ GTVE+RE EFC D EWT+AI N P+ +SAAVIS Q+ELVRS F LA S+ D +V P +Y SLGYI+LYDE+QA T A S L +DFV F GPDQWWP AGPP MFG RG G GG + DW A+Q++KG YGDKD FNDAATGIS SPR+ + S A V++ A S E+ SGEWP+A+ESGVG+ G TYTS R G+S + +GDE ++ +EADRAAGVDPSR+ E DTS + S PL+TS SFNP A+ R +PG DS+ ++ SS + A + + V G + L L SGPSG E +D +DG G GS G XXXXXXXXXXXXXXXXXX G+PPSGRSS +SS +R S+ +E+ R +T++ERQ +++SE ARAASVLRG++FKTPL PDLE AI E+Q+RRR AVQ E + A +P T +GKV +GM RFF A + A++ XXXXXXXXX AEP E + A AG+ +A VP V XXXX X + + +EA L PEE +AYS+NVDRTLE LP ID+GGVS+P+SE+LA ++ ASA P+ LA+ Q Q GSQ+P+LDM+R+ Y AE GM LEE+++ + SPIVATPPALLRPGVGAA RN+ SGS++SSRSTS+TEDMM VSRTSS++ATGSSFEE+ AQSQAA RFL+ G S G X G GN SSLAE LARAEETVGREHEKGLLYRQGPEGVAAAVAGEELPLPP G ++G +VESLAD+LARADDGPGNLKETF++ LDD +++RL+EL AAASA+DADD+TK RWRGSLAEL +KVDR+GN+ + +D SES+SASDG G +SSE+DS +GS Q QA PQARPE
Sbjct: 1 MVVLPTRVAYEVLLQ--PPVFESHRGEPPPPL-VSLAVPSATGSAASTAGSASRTLVKEGTGEG-GGRRRLSDFSRDGGGS-DGSDGLILS--KKAGWRGRRVLQT--DDSGSFTYTTRTQFDLCAAPGSELEEDALRAGIMDVFEVEQEQTEGTAGTVEKREVMEFCDDGSEEWTIAIGNEPSDTQSAAVISAGQMELVRSSEFTTLLAASLE---DSNLTVDPAGLTYSSLGYIVLYDEEQAVTAANSDSLDSDFVAFRGPDQWWPG------------------------HAGPPSPSGAGGGPG---MFGGSTRGGTGKEVGKGGGGGNADWIAQQYEKGXXXXGYGDKD---FNDAATGISVYSPRDEVATSGSGVDSATVVQAAESPELASGEWPEAMESGVGMTGVTYTSNSRGGASTVASQQGDEATAVQSAEADRAAGVDPSRR-EHDTSTSAISMNPLVTSDSFNPAASGSGDGR--VPGGYIGDSAASLESSRKSSEASWGA----SRKTVTPGDSGLLETTEEAEEGESPAPLISGPSGRTLGSAAAALGGEDSQD-----------------------------------EDGRIGSGSAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDGPAAVVXXXXXXTAVPGLPPSGRSSSNSS-----------SRIQSVDYPASRVARSRAASNSSSADELSQRDLTEEERQMRVEDSEAARAASVLRGSSFKTPLHPDLEHAIAVEQQDRRRQAVQGLEASRAPDSGTGAAEPVDLGSPADLPAEVVAAAITAAAAGDAE----KEGEAAASPSPAATGFMGKV---VAGMGMSRFF---APRSPANTPSAAXXXXXXXXXDGAEPTAEVEATA------------------AGDSEA---VPAQYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXANAHKAGASSREEGRPEQKLPSPSEAGXXXXXXXXXXPAAPLGPEEARAYSENVDRTLEGLP-IDDGGVSMPMSELLA------------RAELEASAEHPA---------------------PAAALALLQ-QSVAGSQSPSLDMARLLYNAEEGGMTLEEVEACLASPIVATPPALLRPGVGAARGGPGAPRGRGLLQRNSASGSYISSRSTSITEDMMSNNNLTEDDMSSDAQTTDVSRTSSFVATGSSFEENPAQSQAARNRFLAGGAXXXXXXXXXXXXXXSVASGXXXXXXXXXXXNPPPGGGNLSSLAERLARAEETVGREHEKGLLYRQGPEGVAAAVAGEELPLPPGAAASLPRVIRGGAGRSSMSGGGSSTGE------KVESLADLLARADDGPGNLKETFRL---LDDNEAQRLEELNAAASAEDADDDTKTRWRGSLAELMLKVDRSGNLRDILDIGSDTSESASASDGKXXXXXXXXXGGALSSETDSTSGSVPQTGQAAA--PQARPE 1342 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig881.10.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig881.10.2 >prot_P-littoralis_Contig881.10.2 ID=prot_P-littoralis_Contig881.10.2|Name=mRNA_P-littoralis_Contig881.10.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1535bp MMMEHPQQPREQGGRTGGSESETKRRGMGVIRRRAYHKKPSGFEHNDGFGback to top mRNA from alignment at P-littoralis_Contig881:20741..45536- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig881.10.2 ID=mRNA_P-littoralis_Contig881.10.2|Name=mRNA_P-littoralis_Contig881.10.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=24796bp|location=Sequence derived from alignment at P-littoralis_Contig881:20741..45536- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig881:20741..45536- >mRNA_P-littoralis_Contig881.10.2 ID=mRNA_P-littoralis_Contig881.10.2|Name=mRNA_P-littoralis_Contig881.10.2|organism=Pylaiella littoralis U1_48|type=CDS|length=4605bp|location=Sequence derived from alignment at P-littoralis_Contig881:20741..45536- (Pylaiella littoralis U1_48)back to top |