mRNA_P-littoralis_Contig881.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 196 bits (498), Expect = 9.260e-58 Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDENGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
V+P SQCAC IHTQQ LYL+AL FLMG+IH +CDC C+WCD+ GCK+W+ MC+ L FS+ LAC KV+LL GD+ GGFEFWGRK AC A C+ECGFGKP GIPT+C A A + ER V WIRF DQ M
Sbjct: 378 VDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTM 506
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 196 bits (498), Expect = 8.320e-56 Identity = 85/129 (65.89%), Postives = 100/129 (77.52%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDENGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
V+P SQCAC IHTQQ LYL+AL FLMG+IH +CDC C+WCD+ GCK+W+ MC+ L FS+ LAC KV+LL GD+ GGFEFWGRK AC A C+ECGFGKP GIPT+C A A + ER V WIRF DQ M
Sbjct: 378 VDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTM 506
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5KI39_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI39_9PHAE) HSP 1 Score: 180 bits (456), Expect = 6.990e-54 Identity = 82/129 (63.57%), Postives = 89/129 (68.99%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDENGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
VEPKVSQCAC IHTQQ LY A LM AIH NC+CTC+WCD +GC KW MCK LH+FSE LAC K LA G FE WGRK ACVA C E GFG P GIP +C A S A+R VGW+RF DQ M
Sbjct: 125 VEPKVSQCACQIHTQQGLYHKAFEMLMPAIHANCECTCNWCDGSGCGKWMAMCKDLHSFSEALACEKAGFLAEGRGGRFEHWGRKPACVAMECPEYGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVM 253
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 189 bits (481), Expect = 1.490e-53 Identity = 87/130 (66.92%), Postives = 93/130 (71.54%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDE-NGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
VEPKVSQCAC IHTQQ LYL A LM AIH NCDCTC WCD +GC KW MCK LH+FSE LAC KVD L D G FE WGRK ACVA C+ECGFG P GIP +C A S A+R VGW+RF DQ M
Sbjct: 390 VEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVM 519
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 189 bits (481), Expect = 2.480e-53 Identity = 87/130 (66.92%), Postives = 93/130 (71.54%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDE-NGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
VEPKVSQCAC IHTQQ LYL A LM AIH NCDCTC WCD +GC KW MCK LH+FSE LAC KVD L D G FE WGRK ACVA C+ECGFG P GIP +C A S A+R VGW+RF DQ M
Sbjct: 1014 VEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVM 1143
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE) HSP 1 Score: 179 bits (455), Expect = 5.470e-51 Identity = 82/130 (63.08%), Postives = 90/130 (69.23%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDE-NGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
VEPKVS+CAC HTQQ + L A LM A H NCDCTC WCD +GC KW MCK LH+FSE LAC KVD L D G FE WGRK ACVA C+ECGFG P GIP +C A S A+R VGW+RF DQ M
Sbjct: 48 VEPKVSKCACQTHTQQGIDLKAFEMLMPATHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVM 177
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE) HSP 1 Score: 177 bits (449), Expect = 1.340e-50 Identity = 82/130 (63.08%), Postives = 90/130 (69.23%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDE-NGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
VEPKVSQCAC IHTQQ LYL A LM A+H NCDCTC WCD +GC KW MCK LH+FSE L C KVD L D G FE WG K ACVA C+EC FG P+ IP +C A S A+R VGW+RF DQ M
Sbjct: 102 VEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALDCEKVDCLEEDRGGRFEHWGGKPACVAMECSECRFGNPDDIPMNCDALGSMADRVVGWLRFEDQVM 231
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.100e-48 Identity = 82/130 (63.08%), Postives = 91/130 (70.00%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDE-NGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
VEPK+S CAC IHTQQ LYL + LM A+H NCDCTC CD +GC KW MCK LH+FSE LAC KVD L D G FE WGRK ACVA C+ECGFG P GIP +C A S A+R VGW+RF DQ M
Sbjct: 125 VEPKISPCACQIHTQQGLYLK-VEMLMPAMHSNCDCTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVM 253
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5L4W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4W3_9PHAE) HSP 1 Score: 146 bits (369), Expect = 1.490e-42 Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 2
Query: 77 LMGAIHVNCDCTCSWCDE-NGCKKWAGMCKSLHAFSEELACPKVDLLAGDASGGFEFWGRKSACVAGTCAECGFGKPNGIPTDCQAFASHAERTVGWIRFMDQKM 388
LM A+H NCDCTC WCD +GC KW MCK LH+FSE LAC KVD L D G FE WGRK ACVA C+ECGFG P GIP C A S A+R VGW+RF +Q M
Sbjct: 2 LMPAMHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMKCDALESMADRVVGWLRFENQVM 106
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Match: A0A6H5JE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE40_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.140e-24 Identity = 46/65 (70.77%), Postives = 49/65 (75.38%), Query Frame = 2
Query: 2 VEPKVSQCACMIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDE-NGCKKWAGMCKSLHAFSEELA 193
VEPKVSQCAC IHTQQ LYL A LM A+H NCDCTC WCD +GC KW MCK LH+FSE LA
Sbjct: 125 VEPKVSQCACQIHTQQGLYLKAFEMLMPAMHANCDCTCKWCDGGSGCGKWMAMCKYLHSFSEALA 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig881.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig881.8.1 >prot_P-littoralis_Contig881.8.1 ID=prot_P-littoralis_Contig881.8.1|Name=mRNA_P-littoralis_Contig881.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=119bp MIHTQQKLYLDALRFLMGAIHVNCDCTCSWCDENGCKKWAGMCKSLHAFSback to top mRNA from alignment at P-littoralis_Contig881:8690..9077+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig881.8.1 ID=mRNA_P-littoralis_Contig881.8.1|Name=mRNA_P-littoralis_Contig881.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=388bp|location=Sequence derived from alignment at P-littoralis_Contig881:8690..9077+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig881:8690..9077+ >mRNA_P-littoralis_Contig881.8.1 ID=mRNA_P-littoralis_Contig881.8.1|Name=mRNA_P-littoralis_Contig881.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=357bp|location=Sequence derived from alignment at P-littoralis_Contig881:8690..9077+ (Pylaiella littoralis U1_48)back to top |