prot_P-littoralis_Contig1205.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1205.5.1
Unique Nameprot_P-littoralis_Contig1205.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length89
Homology
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5K294_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K294_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.860e-10
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL--VVEPPVSEEDL-AVEAQAFAA 74
            RC+ C   GH+   CTTK+ DFVPW ARC+G+GH ++ C +E  VL  VVE    E D+ +VE QAF A
Sbjct:  407 RCFKCGHRGHQAIGCTTKEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVE---RESDVDSVEDQAFCA 472          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5K126_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K126_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 8.730e-10
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGH-KEDTCPSEATVLVVEPPVSEEDLAVEAQAFAA 74
            RC+ C   GH+   CTTK+ DFVPW ARC+G+GH KE +   EA +  V    S+ D +VE QAF A
Sbjct:  110 RCFRCGHRGHQANGCTTKEKDFVPWCARCEGWGHTKEKSATEEAVLAQVVEHESDVD-SVEDQAFCA 175          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5JL07_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL07_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.150e-9
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL--VVEPPVSEEDL-AVEAQAFAA 74
            RC+ C   GH+   CTT + DFVPW ARC+G+GH ++ C +E  VL  VVE    E D+ +VE QAF A
Sbjct:   99 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVE---HESDVDSVEDQAFCA 164          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5KM18_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM18_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.180e-9
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL--VVEPPVSEEDL-AVEAQAFAA 74
            RC+ C   GH+   CTT + DFVPW ARC+G+GH ++ C +E  VL  VVE    E D+ +VE QAF A
Sbjct:  160 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVE---HESDVDSVEDQAFCA 225          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5KG71_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG71_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.210e-9
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL--VVEPPVSEEDL-AVEAQAFAA 74
            RC+ C   GH+   CTT + DFVPW ARC+G+GH ++ C +E  VL  VVE    E D+ +VE QAF A
Sbjct:  468 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVE---HESDVDSVEDQAFCA 533          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5JEB2_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEB2_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.220e-9
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL--VVEPPVSEEDL-AVEAQAFAA 74
            RC+ C   GH+   CTT + DFVPW ARC+G+GH ++ C +E  VL  VVE    E D+ +VE QAF A
Sbjct:  426 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVE---HESDVDSVEDQAFCA 491          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5JAQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ2_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.250e-9
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL--VVEPPVSEEDL-AVEAQAFAA 74
            RC+ C   GH+   CTT + DFVPW ARC+G+GH ++ C +E  VL  VVE    E D+ +VE QAF A
Sbjct:  405 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVE---HESDVDSVEDQAFCA 470          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5KY36_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY36_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 2.210e-9
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL--VVEPPVSEEDLA-VEAQAFAA 74
            RC+ C   GH+   CTT + DFVPW ARC+G+GH ++ C +E  VL  VVE    E D+  VE QAF A
Sbjct:  106 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVE---HESDVDYVEVQAFRA 171          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5J9T1_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9T1_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 2.260e-9
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVLVVEPPVSEEDLAVEAQAFAA 74
            RC+ C   GH+   CTT + DFVPW ARC+G+GH ++ C +E  VL        +  +VE QAF A
Sbjct:  427 RCFRCGHRGHQAIGCTTNEKDFVPWCARCEGWGHTKEKCATEEAVLAQVVEHGSDVDSVEDQAFCA 492          
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Match: A0A6H5KBK7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK7_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 2.310e-9
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    9 RCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSEATVL 54
            RC+ C   GHR   CTT + DFVPW ARC+G+GH ++ C +E  VL
Sbjct:  153 RCFRCGHRGHRAIACTTNEKDFVPWCARCEGWGHTKEKCATEEAVL 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1205.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5K294_9PHAE1.860e-1050.72CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K126_9PHAE8.730e-1049.25CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5JL07_9PHAE1.150e-949.28CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KM18_9PHAE1.180e-949.28CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KG71_9PHAE1.210e-949.28CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEB2_9PHAE1.220e-949.28CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5JAQ2_9PHAE1.250e-949.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY36_9PHAE2.210e-949.28CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J9T1_9PHAE2.260e-943.94CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5KBK7_9PHAE2.310e-952.17CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 8..23
score: 8.680233
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 5..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1205contigP-littoralis_Contig1205:7235..8411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1205.5.1mRNA_P-littoralis_Contig1205.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1205 7235..8683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1205.5.1 ID=prot_P-littoralis_Contig1205.5.1|Name=mRNA_P-littoralis_Contig1205.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=89bp
SSCSRPRRRCWSCNWSGHRKEDCTTKQSDFVPWFARCDGFGHKEDTCPSE
ATVLVVEPPVSEEDLAVEAQAFAATETATAPYRRRVGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf