mRNA_P-littoralis_Contig881.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5JNM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM5_9PHAE) HSP 1 Score: 264 bits (675), Expect = 2.800e-87 Identity = 132/150 (88.00%), Postives = 136/150 (90.67%), Query Frame = 2
Query: 2 QGLEGVAAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDS 451
QGLEGVAAVH ENTRAMAASL LQ NS+SNIGRVAYT VLAAVAGAGEHTCSPTDPCNPAER PPA PQ GVSF QRAESLGVREKTFRAAHVRMH T+H IPPPQA EEGRYCWT RKTRSDA DER+L+LAIRFWHSDDVSRASGDS
Sbjct: 19 QGLEGVAAVHTENTRAMAASLGTLQGNSKSNIGRVAYTIVLAAVAGAGEHTCSPTDPCNPAERYPPAEPQSGVSFAQRAESLGVREKTFRAAHVRMHHTNHTIPPPQALEEGRYCWTRRKTRSDAADERMLELAIRFWHSDDVSRASGDS 168
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 285 bits (728), Expect = 3.590e-87 Identity = 144/212 (67.92%), Postives = 160/212 (75.47%), Query Frame = 2
Query: 20 AAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKAGEEYHPRRQLMVAGDKVFRMFLVWPQYVALKKELLEEDPSFQDPGRTTFLSTRCGC 655
AAV AENTRA+ AS+ AL+ +S SNIGR AY TV+AA AGA +HTC P DP G VS RA+SLGVR+ TFRAA RMHRTDH IPP +A E+GRY W RK RSD DERV+ LA RFWHSDD+SRASGDSG KAMWRPSKKAGEEYHPRRQLMVAGD+V+ FL WP+Y+ LK ELL ED SF DPGRT FLSTRCGC
Sbjct: 178 AAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGC 388
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 285 bits (728), Expect = 4.310e-85 Identity = 144/212 (67.92%), Postives = 160/212 (75.47%), Query Frame = 2
Query: 20 AAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKAGEEYHPRRQLMVAGDKVFRMFLVWPQYVALKKELLEEDPSFQDPGRTTFLSTRCGC 655
AAV AENTRA+ AS+ AL+ +S SNIGR AY TV+AA AGA +HTC P DP G VS RA+SLGVR+ TFRAA RMHRTDH IPP +A E+GRY W RK RSD DERV+ LA RFWHSDD+SRASGDSG KAMWRPSKKAGEEYHPRRQLMVAGD+V+ FL WP+Y+ LK ELL ED SF DPGRT FLSTRCGC
Sbjct: 802 AAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGC 1012
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5K614_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K614_9PHAE) HSP 1 Score: 256 bits (654), Expect = 6.290e-83 Identity = 137/182 (75.27%), Postives = 143/182 (78.57%), Query Frame = 2
Query: 2 QGLEGVAAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDS----GDKAMWRPSKKAGEEYHPRRQLMVAGDK 535
QGLEGVAA HAENTRAMAASLAAL+ SQSNIGRVAYTTVLAAVAGAGEHTCSPTDP PQGGVSF QRAESLGVREKTFRAAHVRMH TDH IPPPQA EEGRYCWTTRKTRSDATDE VL+LAIRFWH DDVSRASGDS G + RP G E R ++ AGD+
Sbjct: 49 QGLEGVAAAHAENTRAMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGVSFAQRAESLGVREKTFRAAHVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDEHVLELAIRFWHCDDVSRASGDSPVHGGGEPGQRPRSSLGVEPADSRVVVAAGDE 230
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5J5R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5R2_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.580e-81 Identity = 131/162 (80.86%), Postives = 134/162 (82.72%), Query Frame = 2
Query: 2 QGLEGVAAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKA 487
QGLEGVAA HAENTRAMAASLAAL+ SQSNIGRVAYTTVLAAVAGAGEHTCSPTDP PQGGVSF QRAESLGVREKTFRAA+VRMH TDH IPPPQA EEGRYCWTTRKTRSDATDERVL+LAIRFWH DDVSRASGDS P KA
Sbjct: 19 QGLEGVAAAHAENTRAMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGVSFAQRAESLGVREKTFRAAYVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDERVLELAIRFWHCDDVSRASGDSPVHGGGEPGPKA 180
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5KLZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ5_9PHAE) HSP 1 Score: 252 bits (643), Expect = 3.340e-81 Identity = 132/162 (81.48%), Postives = 134/162 (82.72%), Query Frame = 2
Query: 2 QGLEGVAAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKA 487
QGLEGVAAVHAENTR MAASLAAL+ SQSNIGRVAYTTVLAAVAGAGEHTCSPTDP PQGGVSF QRAESLGVREKTFRAAHVRMH TDH IPPPQA EEGRYCWTTRKTRSDATDERVL+LAIRFWH DDVSRASGDS P KA
Sbjct: 105 QGLEGVAAVHAENTRTMAASLAALKGKSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPXXXXXXXXXXEPQGGVSFAQRAESLGVREKTFRAAHVRMHHTDHTIPPPQALEEGRYCWTTRKTRSDATDERVLELAIRFWHCDDVSRASGDSPVHGGGEPGPKA 266
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5K647_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K647_9PHAE) HSP 1 Score: 229 bits (585), Expect = 8.800e-72 Identity = 126/211 (59.72%), Postives = 150/211 (71.09%), Query Frame = 2
Query: 20 AAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKAGEEYHPRRQLMVAGDKVFRMFLVWPQYVALKKELLEEDPSFQDPGRTTFLSTRCG 652
AAV+A NTRA+ ASL AL+ +S S+IG AYTT LA AGAGEHTCS + C+P +RC PA P GGVSF +RA+SLG+R +TF A VRMH T+H I P A +G Y + RKTRSD T+ V+ LA FWHSDDVSRA K M++ SKK HPRRQLM GD+V+RMFL +Y+ALK LLE+D SF DPGRTTFLSTRCG
Sbjct: 109 AAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCSDPNLCHPGKRCKPAEP-GGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRA------KNMYKESKKRDAPSHPRRQLMHKGDRVWRMFLESRRYLALKGRLLEQDSSFTDPGRTTFLSTRCG 312
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 232 bits (592), Expect = 3.560e-70 Identity = 125/218 (57.34%), Postives = 149/218 (68.35%), Query Frame = 2
Query: 2 QGLEGVAAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKAGEEYHPRRQLMVAGDKVFRMFLVWPQYVALKKELLEEDPSFQDPGRTTFLSTRCGC 655
Q VAA+ A NTRA+ ASL AL+ + S+IG Y T LA AGAGEHTC+ TD C+P +RC P GGVS +RA SLG+R +TF A RMH T+H I P A EG Y + RKTRSD T+ V+ LA FWHSDDVSRA+G+SG K M++ SKK HPRRQLM GD V+RMFL +Y+ALK LLE+D +F DPGRTTFLSTRCGC
Sbjct: 161 QAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVE-SGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGC 376
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 232 bits (592), Expect = 2.070e-67 Identity = 125/218 (57.34%), Postives = 149/218 (68.35%), Query Frame = 2
Query: 2 QGLEGVAAVHAENTRAMAASLAALQANSQSNIGRVAYTTVLAAVAGAGEHTCSPTDPCNPAERCPPAAPQGGVSFVQRAESLGVREKTFRAAHVRMHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKAGEEYHPRRQLMVAGDKVFRMFLVWPQYVALKKELLEEDPSFQDPGRTTFLSTRCGC 655
Q VAA+ A NTRA+ ASL AL+ + S+IG Y T LA AGAGEHTC+ TD C+P +RC P GGVS +RA SLG+R +TF A RMH T+H I P A EG Y + RKTRSD T+ V+ LA FWHSDDVSRA+G+SG K M++ SKK HPRRQLM GD V+RMFL +Y+ALK LLE+D +F DPGRTTFLSTRCGC
Sbjct: 161 QAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVE-SGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGC 376
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Match: A0A6H5JG47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG47_9PHAE) HSP 1 Score: 206 bits (525), Expect = 7.950e-65 Identity = 95/123 (77.24%), Postives = 103/123 (83.74%), Query Frame = 2
Query: 287 MHRTDHAIPPPQAREEGRYCWTTRKTRSDATDERVLQLAIRFWHSDDVSRASGDSGDKAMWRPSKKAGEEYHPRRQLMVAGDKVFRMFLVWPQYVALKKELLEEDPSFQDPGRTTFLSTRCGC 655
MHRTDH IPP +A E+GRY W RK RSD DERV+ LA RFWHSDD+SRASGDSG KAMWRPSKKAGEEYHPRRQLMVAGD+V+R FL WP+Y+ LK ELL ED SF DPGRT FLSTRCGC
Sbjct: 1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFADPGRTLFLSTRCGC 123 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig881.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig881.7.1 >prot_P-littoralis_Contig881.7.1 ID=prot_P-littoralis_Contig881.7.1|Name=mRNA_P-littoralis_Contig881.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp ARVGGRSRSPRGKHSRDGRFVGRVAGQQPEQHRPGCVYDRAGGGGWSWGAback to top mRNA from alignment at P-littoralis_Contig881:7668..8464+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig881.7.1 ID=mRNA_P-littoralis_Contig881.7.1|Name=mRNA_P-littoralis_Contig881.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=797bp|location=Sequence derived from alignment at P-littoralis_Contig881:7668..8464+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig881:7668..8464+ >mRNA_P-littoralis_Contig881.7.1 ID=mRNA_P-littoralis_Contig881.7.1|Name=mRNA_P-littoralis_Contig881.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig881:7668..8464+ (Pylaiella littoralis U1_48)back to top |