mRNA_P-littoralis_Contig88.117.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig88.117.1
Unique NamemRNA_P-littoralis_Contig88.117.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: D8LR33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR33_ECTSI)

HSP 1 Score: 701 bits (1809), Expect = 3.250e-244
Identity = 434/691 (62.81%), Postives = 480/691 (69.46%), Query Frame = 1 
Query:    1 MDADPLAAILGEKEELDESDYLSVKNQGSK---GNDPEQLAPDLLAACKENDEGRAKDLLADGVSPGYSDPDSG-------------------WSCLHWSVYNGNPVVTRALMRAGAASGYKRASTKRTQANKPQPFGGLGYHCRLNNVGRAPTSSIPMTGSPLHWSAYRGDLGITWILLKEGFSPNDTDDMGNTVTHLAAANGHERVLDTLIRDGADVHRQNKFKNTPYDVANSANCRGILRRAEALPAPSAEEEQKMHHENLQRILQVERVLLEVVGPLEPTDDKKGRRKRELQ-----EQERDAGGEDXXXXXXXXEEDEAGRLSGDKKGXAEATSGXXXXXXXXXXXXXXXXGGXXXXXXXXDAASQDQSGSPLVTVDK-GADDRTEGDAKSDEGAGQDGAXXXXXAIAEGRESGXXXXXQNKDAGSXXXXXXXXXXXXXXXXXXXXXXXXEDLLAQVEQIREAVAGAEALCICEDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAEGNSLITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLPIDPMPKDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGE 1989
            MD DPLAAILGE EE+ ES++L  KN+G K   G DPE LAPDLLAACKEN++ RA+D LADGV PGYSDP+SG                   WSCLHWSVYNGNP++TRAL+RAGA SGY+RAS   TQ  K           +  N  R P+SS+P++ +PLHWSAYRGDLGITWILLKEG+SPND D+MGNT THLAAANGHERVLDTLIRDGADVHRQNKFKNTP+DVANSA CRGILRRAEALPAPS EE +KMH ENLQRIL+VERVL EVVGPLEPTDD+              +Q +D    D          DE   ++G   G A AT G        XXXXXXXX  XXXXXXXX    QD  G      +K G + R   DAK  +G G D          +G E       +  D G                         EDLL QVE IREAVAGAEALCICEDLVAA                  ++V+A+GPI+TQQAYTTLVNRL LLLRRAEGNS I+ KLKKRAKALV+KSHGEYWLQVSAQRLLKV+CAE RH+ DMAKLEA I+KAAKV A  QLV+DCRSLLKRLTTEVEISKAI GFPTVRLPIDPMPKDYWQPEDIGHIEE EGFPLPPVDADGK++DYVWVPSKSLRALSAACKRMSEAL GGE
Sbjct:    2 MDEDPLAAILGE-EEVHESEFLPGKNKGPKLNGGIDPEILAPDLLAACKENNDARAQDFLADGVPPGYSDPESGALYSRFVSIRVSRLGGKYGWSCLHWSVYNGNPMLTRALVRAGATSGYRRASNVLTQGRKAH---------KQVNARRGPSSSLPISDTPLHWSAYRGDLGITWILLKEGYSPNDMDNMGNTATHLAAANGHERVLDTLIRDGADVHRQNKFKNTPHDVANSAECRGILRRAEALPAPSVEEAEKMHTENLQRILEVERVLAEVVGPLEPTDDEDXXXXXXXXXXXXIKQAKDVDNRDDEELGEARVGDE---VTGGTVG-AIATGGQAAGEGEGXXXXXXXX--XXXXXXXXXXXCQDSHGRHSAAEEKTGEEGRM--DAKETDGDGGDDYKAGRTNNGDGGER------RQGDVG--IETHGTEGKEPDRGSRGSVGELSEDLLGQVELIREAVAGAEALCICEDLVAA------------------TKVAAEGPILTQQAYTTLVNRLMLLLRRAEGNSRISSKLKKRAKALVDKSHGEYWLQVSAQRLLKVECAEARHMADMAKLEARIEKAAKVEAHPQLVQDCRSLLKRLTTEVEISKAILGFPTVRLPIDPMPKDYWQPEDIGHIEENEGFPLPPVDADGKNMDYVWVPSKSLRALSAACKRMSEALVGGE 648
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A7S2XUY5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUY5_9STRA)

HSP 1 Score: 192 bits (488), Expect = 4.940e-52
Identity = 119/279 (42.65%), Postives = 165/279 (59.14%), Query Frame = 1 
Query: 1288 LLAQVEQIREAVAGAEALCICEDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAEGNSLITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLPIDPMPKDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGE--GLNPELVERGGKKLHEHHKELKLLTEKDTADKDKAHSIATKAA 2118
            +L +V+ +R A+  AE + + E+L+  AR  ++ LLLQ  + +Q+ +V    PI+TQ  Y TLVN L  L RRA+ + L    L   A  L+ KSH EYWLQV+  RL +V+CA E  V DM +L   I+KA  V A+A+LV + +SLL RL+ E+EI +A+ GFP VR+PI   PKDY+ P DIGHI   E +PLPP D       YVW+PS +L+A  +A +R+ + L   +    N +LV     K  E    LK L  KD  D+    + ATKAA
Sbjct:   19 ILEKVDLLRRAIKQAEDMAVEEELIDEARDLVQQLLLQEELRQQIEEVRKAEPIITQTQYCTLVNPLAQLSRRAQESKLPA-SLVHTANFLLNKSHAEYWLQVANNRLAEVECATEDSVGDMNRLREAIRKADSVEAEAKLVGNAQSLLSRLSAELEIRRAVGGFPEVRVPIPEPPKDYYLPSDIGHIMVDENYPLPPPDTG----QYVWIPSDALKAQRSAVERLKKGLVEADKADANADLVSEAKLKQRESLGILKKLEAKDEEDRTLGEAAATKAA 292
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A836CBB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB5_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.890e-51
Identity = 225/772 (29.15%), Postives = 303/772 (39.25%), Query Frame = 1 
Query:  130 ACKENDEGRAKDLLADGVSPGYSDPDSGWSCLHWSVYNGNPVVTRALMRAGAASGYKRASTKRTQANKPQPFG--------GLGYHCRLNNVGRAPTSSIPMTGSPLHWSAYRGDLGITWILLKEGFSPNDTDDMGNTVTHLAAANGHERVLDTLIRDGAD----------------------VHRQNKFKNTPYDVANSANCRGILRRAEALPAPSAEEEQKMHHENLQRILQVERVLLEVVGPLEPTDDKKGRRKRELQEQERDAGGEDXXXXXXXXEEDEAGRLSGDKKGXAEATSGXXXXXXXXXXXXXXXXGGXXXXXXXXDAASQDQSGSPLVTVDKGADDRTEGDAKSDEGAGQDGAXXXXX--AIAEGRESGXXXXXQNKDAGSXXXXXXXXXXXXXXXXXXXXXXXXEDLLAQVEQIREAVAGAEALCICEDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNR-------------------LTLLLRRAEGNSLITRKLKKRAKALVEKSHG----------------------------------EYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVE--------------ISKAITGFPTVRLPIDPM-------PKDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGEGL--NPELVERGGKKLHEHHKELKLLTEKDTADKDKAHSIATKAAK 2121
            AC++     A+ LL+ G  P ++D  +GWS LHW++++G   + +AL+  GAA  YKRA     +A   Q           G+          + PT ++    SPLHW+A RGDL   W+LL+EG+SPND D MGN             VL+ L+ DGAD                      VH +N+FKNT  +VA    CR +LR A    AP  E++ KMH  N+  +   E  L E +           +R+  L E+                               A    G    XXXXXXXXXXXX  XXXXXXXX          P +   + A  +    A   E A  + A        +AE +E       Q                              E L  QVE++R A            L+                   V                                        L+ LL RA G S +   L +RA  LVEKS                                    EYWLQV+ Q L  V+CA+E+HV D++KL+  I+KA    A A LV    ++  RL  E+               + +A    P  RLP  P+       PKD+WQ ED+G ++ETEGFPLPP + DG   DYVWVP+ +L+ L AA  R+  A+  G     N  L+ +   KL    K+LK+L  KD  D+DK    A KAAK
Sbjct:   56 ACRDKRAEAARALLSKGGLPHHTDAQTGWSPLHWAIFHGCTELVKALLDGGAAEPYKRAQAAAARAPIAQVRAARDGGGRRGVAAXXXGEGASQRPTVAV---NSPLHWAAARGDLPAVWLLLQEGYSPNDVDAMGNXXXXXXXXXXXXAVLEALVHDGADIRASTVHTYPPFLXXXXXXXXXVHLRNRFKNTAMEVATCPKCRAVLREASLRSAPGPEQQAKMHAANMHHLTAAETALREAL-----------QRRALLPERH--------------------------NLNLASIGGGAMRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPPLPGSEPAGGQLARQAADIEAAMAEVAALGLCHDLVAEAKERVACLRLQ------------------------------EHLELQVERVRAAKPAVRQTTYAALLIXXXXXXXXXXXXXXXXAVLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSALLARAAGGSAVPAALTERASGLVEKSFSTXXXXXXXXXXXXXXXSGPAALWTRPSGVLAAGDEYWLQVATQHLKDVECADEQHVRDVSKLDGAIQKARACRAYAPLVEGSAAVHARLLAELXXXXXXXXXXXXXXXVRRATADIPVARLP--PVVEAGAKPPKDWWQLEDMGRVQETEGFPLPPKNEDGSDADYVWVPAPALQKLRAAHGRLELAVQAGHAAAANEALLAQAAVKLAAAGKDLKVLHAKDAEDRDKLVGAAVKAAK 755
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A7S2CCZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCZ4_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.020e-47
Identity = 115/279 (41.22%), Postives = 168/279 (60.22%), Query Frame = 1 
Query: 1294 AQVEQIREAVAGAEALCICEDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAEGNSL-ITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLPIDPMPKDYWQPE-DIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGE--GLNPELVERGGKKLHEHHKELKLLTEKDTADKDKAHSIATKAA 2118
            AQ++ + +A+  AE   +   LVAA    ++ LL+   + +Q+  V +  PI+TQ+ YTT VN+L  LLR+  G S+ ++  L +  + L  KSH EYWL+++  ++  V CA E H+P + KLE  I  A +  AQ +LV   ++LL +L  E+EIS+A+   P V+LPID  PKDYW  E D+GHIEETE FPLPP +++     Y+WVPS SL+++ A+ +R++ A  GGE  G +  +VE    KL    K LK L  KD  DK  A + A K A
Sbjct:  265 AQLQTLEDAIMQAEGASVSPSLVAAGHDAVKRLLIDQELTEQIELVQSHEPIITQKLYTTHVNKLARLLRK--GRSMDVSAHLIEDGEYLKRKSHSEYWLKMACNKMGPVTCATEEHIPHIDKLERAIAAAEEEHAQTELVAFGKTLLSKLHAELEISRAVESVPIVKLPIDEPPKDYWDLEQDVGHIEETEEFPLPPAESEV----YIWVPSPSLKSVRASYERLAAAQKGGESGGADGAIVEMAKSKLSAVEKGLKQLEAKDAEDKAVAVAAAEKLA 537
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A7S3Y3Q8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3Q8_HETAK)

HSP 1 Score: 180 bits (457), Expect = 1.170e-47
Identity = 116/290 (40.00%), Postives = 166/290 (57.24%), Query Frame = 1 
Query: 1288 LLAQVEQIREAVAGAEALCICEDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAEGNSLITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLPID----------PMPKDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGE--GLNPELVERGGKKLHEHHKELKLLTEKDTADKDKAHSIATKAAK 2121
            LL + + +R A   AEA  +  DLVA AR  ++ LLLQ  + K+V  V ++ P++TQ AYTTL+N L+ L  RAE  + ++  L + A+ LV + H EYWLQV+  RL  V CA E  V DMA+L+  ++KAA  G    LV + R+   +L+ ++E+ +A   +P VR+P D          P+PKD+WQP D+GHI   E FPL P +A     +Y WVPS++L+A   A  R++ AL  G   G +   +E  G  L    + L  L EKD  D   A ++A KAAK
Sbjct:    9 LLERADLVRAAADAAEAAAVDADLVADARVLVDRLLLQEELRKKVEAVGSQSPVLTQTAYTTLINPLSSLAARAE-EAEVSPALCRAARFLVGRGHSEYWLQVALGRLRAVDCAGEDQVRDMARLKESLRKAAAAGGDEGLVGEARARHAKLSADLELGRARGAYPEVRVPPDAPREGEEPPPPLPKDFWQPSDVGHILVDEHFPLLPPEAT----EYAWVPSEALKAFRGAHDRLAAALEKGREAGAHEGALEEAGATLKAQGQILAKLEEKDAEDFAAAKTVAEKAAK 293
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A7S1TT43_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TT43_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.800e-29
Identity = 98/282 (34.75%), Postives = 149/282 (52.84%), Query Frame = 1 
Query: 1300 VEQIREAVAGAEALCICEDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAE-GNSLITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLPIDPMPKDYWQPEDIGHI-EETEGFPL-PPVDADGKS---LDYVWVPSKSLRALSAACKRMSEALGG--GEGLNPELVERGGKKLHEHHKELKLLTEKDTADKDKAHSIATKAAK 2121
            +E++RE  A A A+ +  +++         + L+  +   ++ + A  P++TQ  YT L N L LL+ R E G       +   A+ LV +SH EYWLQV+ +++   +CA E  V  M +L + I+ AA  GA A  V + R  L  L  E+E+S+A+   PTVRLPI+  PKDYW  ED G   ++   +PL PP+  D       +Y W+PS+SL AL +A  R+  AL       +N E+  +  +   +   +LKLL  KD  D++K      KAAK
Sbjct:  253 IERLREVTALAGAMGVPPEVLEVGAAGEGAIRLRGDLRSAMADLEAVAPVLTQSQYTALANPLKLLVARFEKGTVPCDGAILDAARTLVRRSHCEYWLQVALRQVEPCECATEATVNLMGRLRSAIEAAAAEGADAAKVGEARERLGVLEGELEMSRALVVVPTVRLPIEEAPKDYWGDEDKGKFWDDYPEWPLEPPLPEDAPEDAKPEYKWIPSESLAALRSAVNRLDAALESVADAKVNEEVKAQAEEVQKKAAGDLKLLENKDEEDREKEFVAVEKAAK 534
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A482SB83_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB83_9ARCH)

HSP 1 Score: 127 bits (320), Expect = 1.840e-29
Identity = 77/228 (33.77%), Postives = 126/228 (55.26%), Query Frame = 1 
Query: 1408 IEKQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAEGNSLITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLPIDPMPKDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGE--GLNPELVERGGKKLHEHHKELKLLTEKDTADK 2085
            ++  ++ +S + P+ +  AYT     L   + +A    + + K++    AL     G  W+    +RL  V+   + +  DM KL   ++    +     L+   R LLKRL  E+++S+A+  FP++RLP+DP P+ Y+ PED GH++ETEG+PLPP   D     Y+WVP++SL AL+ A  R+  A+ G E  G N ++V +  +++ +  KE KLL  KD  DK
Sbjct:    5 LQAALNTLSGQLPLTSTAAYTEHAYPLERAVEQAVDLGVDSTKIEGAILAL-RAVQGGVWVATLLKRLAGVETGGDANEHDMNKLRKILEDGEVLSIDPSLLTQGRGLLKRLDAELQMSRALLMFPSIRLPVDPAPEGYYLPEDFGHVQETEGYPLPPEGGD-----YIWVPAQSLTALTEALNRLKNAMNGAESSGANADIVSKSKEQMTKGEKEAKLLEAKDEKDK 226
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A7S0STB9_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STB9_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.710e-22
Identity = 85/258 (32.95%), Postives = 130/258 (50.39%), Query Frame = 1 
Query: 1375 RRIEGLLLQHSIE----KQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAE--GNSLITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRS-LLKRLTTEVEISKAITGFPTVRLPIDPMPKDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGE--GLNPELVERGGKKLHEHHKELKLLTEKDTADKDKAHSIATKAAK 2121
            ++ E LLL+  +       +  +    PI +Q  Y+  VN++   +   E    S++   +    K L+ +   EYWL    ++L  V  A + +  DM  L+  I+KA  +   +  + D  S L  RL +E+ +++AI   PTVRLPID  P DYWQP DIG + +TE +P PP      S +Y+W PS+S   L  A  ++S +  G +  G NP ++    +KL    KE K+L  K+T DK      A KAAK
Sbjct:  347 KQAEDLLLKMDLSLDLLTNIENLKKNMPITSQLNYSLYVNKVEKTIIEIEKINFSIVPITI---GKELINQCQMEYWLYTYIKKLEHVTTAVDSNEHDMISLKKAIEKAKLLNNFSNSLLDISSKLCDRLFSELNMTRAIKSIPTVRLPIDNPPPDYWQPCDIGSVRQTEEYPNPP-----SSGEYIWDPSESYSQLKNAIDQLSSSYNGADLLGANPVIIAEAKEKLVRAEKEFKILDVKNTNDKVLGIEAAIKAAK 596
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A7J6LGK6_PERCH (Ankyrin repeat and SOCS box protein 12 n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LGK6_PERCH)

HSP 1 Score: 106 bits (265), Expect = 2.540e-20
Identity = 72/200 (36.00%), Postives = 98/200 (49.00%), Query Frame = 1 
Query:  121 LLAACKENDEGRAKDLLADGVSPGYSDPDSGWSCLHWSVYNGNPVVTRALMRAGAASGY--------KRASTKRTQA-NKPQP--FGGLGY---HCRLNNVGRAPTSSIP---MTGSPLHWSAYRGDLGITWILLKEGFSPNDTDDMGNTVTHLAAANGHERVLDTLIRDGADVHRQNKFKNTPYDVANSANCRGILRRA 669
            LL AC EN+      LL     P   DP S WS L W+  NGN    R+L+   A   Y        K      T A N P+   FG  GY    C+L+        SIP   +  +PLHW+A++G L + W+LLK+G SP++ D +GNTV H AAA G  +V+  L+  G D+  +N   + P  +      R +LRRA
Sbjct:   40 LLEACVENNTVECLKLLERRADPTCRDPKS-WSPLTWAASNGNVTFARSLLARDAGRAYRSDLDISKKGVGGDITLAHNLPRMTLFGHRGYLRGACKLS-------LSIPKRRVKHTPLHWAAFKGHLNVVWLLLKDGMSPHEVDQLGNTVLHQAAAGGSVQVVSCLLAQGCDLMAKNDRGHHPLALCTVDKPRALLRRA 231
[Close]
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Match: A0A7S2LA78_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA78_9STRA)

HSP 1 Score: 104 bits (260), Expect = 9.510e-20
Identity = 92/317 (29.02%), Postives = 142/317 (44.79%), Query Frame = 1 
Query: 1303 EQIREAVAGAEALCICEDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNRLTLLLRRAEG----------------------------NSL----ITRKLKKRAKALVEKSHGEYWLQVSAQRLLK------VKCAEERHVPDMAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLPIDPMP----KDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSAACKRMSEALGGGE--GLNPELVERGGKKLHEHHKELKLLTEKDTADKDKAHSIATKAAK 2121
            E+++ A+  AE L + +  +   RR +  L L  ++E  + +V     I TQ +Y  LV++L + ++  E                             N L    +   L ++   L EKSH EYWL  +  +L        V+  +E    DMA LE   +KA   GA A LV D      +L +E+E+ ++ +  P VR     M     KDYWQ +DIG IEET  +PLPP D +     Y W+ S SL +L  A    ++++   +  G N E++E     L + +K   LL  KD  D+++A     K  K
Sbjct:  247 EKLKNAIFCAEELGVAQVSIDLGRRFLARLELIENLEAHIERVKQVDVIKTQTSYV-LVDQLKICIKEVENYVASQVRVNPLRQLTSFLASTLSRESQLNDLPHMKVINDLVEQGHFLCEKSHNEYWLNAAYCKLKSRDTRSVVRSTDESLTKDMAALEEATEKALSAGANAMLVADASQFHAKLASEIELHQSRSRIPKVREYNPEMTPAEGKDYWQDDDIGRIEETVEYPLPPEDGN-----YKWIESSSLTSLRLAITEFTKSITKAKENGANEEILEESKAFLSQQNKIRDLLITKDEIDREEAVKNVQKMCK 557
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LR33_ECTSI3.250e-24462.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XUY5_9STRA4.940e-5242.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CBB5_9STRA3.890e-5129.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CCZ4_9STRA1.020e-4741.22Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3Y3Q8_HETAK1.170e-4740.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1TT43_9STRA1.800e-2934.75Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A482SB83_9ARCH1.840e-2933.77Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S0STB9_9STRA1.710e-2232.95Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7J6LGK6_PERCH2.540e-2036.00Ankyrin repeat and SOCS box protein 12 n=1 Tax=Per... [more]
A0A7S2LA78_9STRA9.510e-2029.02Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig88contigP-littoralis_Contig88:580254..590682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog99158.XP_008885474.1
Model size2166
Max annot lvl5794|Apicomplexa
Hectar predicted targeting categoryother localisation
Exons15
Evalue2.89e-22
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota,3YHQ0@5794|Apicomplexa,3YQ10@5796|Coccidia
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-06_004540.1
DescriptionAnkyrin repeats (many copies)
Cds size2166
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791769.28124-CDS-P-littoralis_Contig88:580253..5803731680791769.28124-CDS-P-littoralis_Contig88:580253..580373Pylaiella littoralis U1_48CDSP-littoralis_Contig88 580254..580373 -
1680791769.296212-CDS-P-littoralis_Contig88:580730..5807871680791769.296212-CDS-P-littoralis_Contig88:580730..580787Pylaiella littoralis U1_48CDSP-littoralis_Contig88 580731..580787 -
1680791769.3069496-CDS-P-littoralis_Contig88:581277..5814601680791769.3069496-CDS-P-littoralis_Contig88:581277..581460Pylaiella littoralis U1_48CDSP-littoralis_Contig88 581278..581460 -
1680791769.3211696-CDS-P-littoralis_Contig88:582212..5823381680791769.3211696-CDS-P-littoralis_Contig88:582212..582338Pylaiella littoralis U1_48CDSP-littoralis_Contig88 582213..582338 -
1680791769.3316858-CDS-P-littoralis_Contig88:582949..5830751680791769.3316858-CDS-P-littoralis_Contig88:582949..583075Pylaiella littoralis U1_48CDSP-littoralis_Contig88 582950..583075 -
1680791769.3429737-CDS-P-littoralis_Contig88:583852..5839871680791769.3429737-CDS-P-littoralis_Contig88:583852..583987Pylaiella littoralis U1_48CDSP-littoralis_Contig88 583853..583987 -
1680791769.357146-CDS-P-littoralis_Contig88:584269..5843231680791769.357146-CDS-P-littoralis_Contig88:584269..584323Pylaiella littoralis U1_48CDSP-littoralis_Contig88 584270..584323 -
1680791769.3720791-CDS-P-littoralis_Contig88:584929..5849951680791769.3720791-CDS-P-littoralis_Contig88:584929..584995Pylaiella littoralis U1_48CDSP-littoralis_Contig88 584930..584995 -
1680791769.3824673-CDS-P-littoralis_Contig88:585247..5858171680791769.3824673-CDS-P-littoralis_Contig88:585247..585817Pylaiella littoralis U1_48CDSP-littoralis_Contig88 585248..585817 -
1680791769.3954828-CDS-P-littoralis_Contig88:586422..5865991680791769.3954828-CDS-P-littoralis_Contig88:586422..586599Pylaiella littoralis U1_48CDSP-littoralis_Contig88 586423..586599 -
1680791769.4081206-CDS-P-littoralis_Contig88:587095..5871701680791769.4081206-CDS-P-littoralis_Contig88:587095..587170Pylaiella littoralis U1_48CDSP-littoralis_Contig88 587096..587170 -
1680791769.421466-CDS-P-littoralis_Contig88:587661..5877661680791769.421466-CDS-P-littoralis_Contig88:587661..587766Pylaiella littoralis U1_48CDSP-littoralis_Contig88 587662..587766 -
1680791769.434361-CDS-P-littoralis_Contig88:588484..5886451680791769.434361-CDS-P-littoralis_Contig88:588484..588645Pylaiella littoralis U1_48CDSP-littoralis_Contig88 588485..588645 -
1680791769.4450018-CDS-P-littoralis_Contig88:589035..5892071680791769.4450018-CDS-P-littoralis_Contig88:589035..589207Pylaiella littoralis U1_48CDSP-littoralis_Contig88 589036..589207 -
1680791769.456501-CDS-P-littoralis_Contig88:590643..5906821680791769.456501-CDS-P-littoralis_Contig88:590643..590682Pylaiella littoralis U1_48CDSP-littoralis_Contig88 590644..590682 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig88.117.1prot_P-littoralis_Contig88.117.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig88 580254..590682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig88.117.1

>prot_P-littoralis_Contig88.117.1 ID=prot_P-littoralis_Contig88.117.1|Name=mRNA_P-littoralis_Contig88.117.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=722bp
MDADPLAAILGEKEELDESDYLSVKNQGSKGNDPEQLAPDLLAACKENDE
GRAKDLLADGVSPGYSDPDSGWSCLHWSVYNGNPVVTRALMRAGAASGYK
RASTKRTQANKPQPFGGLGYHCRLNNVGRAPTSSIPMTGSPLHWSAYRGD
LGITWILLKEGFSPNDTDDMGNTVTHLAAANGHERVLDTLIRDGADVHRQ
NKFKNTPYDVANSANCRGILRRAEALPAPSAEEEQKMHHENLQRILQVER
VLLEVVGPLEPTDDKKGRRKRELQEQERDAGGEDGGEDGGDDEEDEAGRL
SGDKKGEAEATSGEAAESDGRDDGGEKEDGGAGAGAGEGDAASQDQSGSP
LVTVDKGADDRTEGDAKSDEGAGQDGAAAEAAAIAEGRESGGGGGGQNKD
AGSKDVGGTDGGGASRGGAEDGDTEPGEDLLAQVEQIREAVAGAEALCIC
EDLVAAARRRIEGLLLQHSIEKQVSQVSAKGPIVTQQAYTTLVNRLTLLL
RRAEGNSLITRKLKKRAKALVEKSHGEYWLQVSAQRLLKVKCAEERHVPD
MAKLEACIKKAAKVGAQAQLVRDCRSLLKRLTTEVEISKAITGFPTVRLP
IDPMPKDYWQPEDIGHIEETEGFPLPPVDADGKSLDYVWVPSKSLRALSA
ACKRMSEALGGGEGLNPELVERGGKKLHEHHKELKLLTEKDTADKDKAHS
IATKAAKKKKKKGGGGKKKKK*
back to top

mRNA from alignment at P-littoralis_Contig88:580254..590682-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig88.117.1 ID=mRNA_P-littoralis_Contig88.117.1|Name=mRNA_P-littoralis_Contig88.117.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10429bp|location=Sequence derived from alignment at P-littoralis_Contig88:580254..590682- (Pylaiella littoralis U1_48)
ATGGACGCCGATCCTCTCGCCGCGATCCTTGGAGAGAAGGTAACATACTC
CGGAGTATTTATTTTATTTTATTTTGTTCAAAGGTTTTTGTTGGACAAAG
TGTCTCGAAAATTGTGTTGTCGACGACCAGCGAGATTGTCATAGATGCAT
GAATGTACAGTATAATTTCGTCCGCGTTCCGTAACCGATCGCTATGTTCG
GTGGCCCTGCCACATAATTGGTACGGTAATAGACATATACGGGTAGATAT
TTGCTGCACGTCTGGACAAAGGCAGTGCATCGGCATGGATTGTTGAGCAT
AAACTTCGTATATAGGCAATGCAAAAGCGTGTCCATGATGTGCAGTATTC
TGTACGAGTACATTGATTCCATGCGCCGCAAAATACTGGTACTCGGTATG
ATACCTAACCGGTATTAATGCCAGGTACAATAGTGCACCGAGATCCTCTG
TGTGCTGACGATAAACGCCAATGGATTGGCCTCGCGTTCTGCGGTGCCGA
TGGTTGCACACGCGTGGTGATCACAGACAACGCACCATTTTGATCATAAT
ATCCTTCGGTTATGTTGTGGGCAATCCGTTTGCTTTCTTTTTTTTGACAC
GCTCACATATTTCAAACTTGTACAATATGCGTTGGTTCTACTGTAGACCA
TGTCTTGTACGTAAGGAGCCTTGTTCACGTACCTTCTCCAGTCTGATTTG
TAGGCAGCGACCTTCACCCGTGGTCACATAGAAGGATTCCTATCCCTGAG
GCCCCCCGCCTTGTTTCTGCGGTTCGTGCCTTCATATTTGATCGCGGCAG
GGTTCATTCAACAAGTCTTCTTTCCCTCGTTGAAAGATCTTGTGATAATA
AGTCGAGTTTGGTCTACTTGCGAAGTTTCTCTTTTCGACCTCACAGTACT
ACTGCTGTACTACATACACAGAACGTATTTTACTACTGTGTGCGAACCAT
GCAACAACCGCATGGAAATTACCTTGCTCGGTGGTAGACGAAAGCTGGCA
CGTGCGGCAAAACAACACGAAACGTGTTCACAAAAATACGGTGGATATTA
TGACGCACGATTTATCAACAACTTTCACGACCAAGTCCCTGGAAACACTT
TTACCGAAATTCTGGAGGTCAAGCAAGGCACCTCACGACGGGAAAACAAA
TCCATTACTGTAGCATGTGGTTGAAGACCTTCGCTTACAGGCTGATAATC
TTTTCTGATTCACCGTTACCCTACCCCCCGAAAAAAACTCGCCTAGACAC
GCTCAAGCTCGAGCTACTGTCGACTGCAGAAAACTCATATAGTTTGATTT
CCATTTCTTCTATGAACAATAATGTAAGGTTGGTGTCCCCCGCGGGGAAA
ACGTTACAGTACTGTATCTCAACTAATTAGTTTCAATTTCCGAGGTCAAG
ATCGACCTTGCAGAGGCCAAAACTCTTGTTCTCGATGCACCACAACCGCT
GCAAAACCCCACGCACATGTAGCAGGAAGAGCTGGATGAGAGCGATTACC
TTTCAGTCAAGAACCAAGGCTCTAAGGGGAATGACCCCGAGCAACTTGCC
CCGGACCTCCTCGCGGCCTGCAAGGAAAACGACGAAGGACGTGCGAAAGA
TCTTCTAGCCGACGGCGTTTCACCGGGCTATTCAGACCCGGACTCGGGTA
TGATACTTGATAAATTTGGTATCGTTATCGCTCCTCTACCATATAGTGTC
ATACGAGCACTGTATGAAAAAGGTGGACACGGTCCGGTTGGTGGGGTGAG
GGAGGGAATGCAGCTCTAATGAGTACAGTTTTGGAAGCAAATGCGGACCA
AATTGCTTGATTTGTACTGTTGACTTTCTAAAATGAAGAGTTGGTTTAGC
CCAGATTGACGAGAACAGGTGCGTTTCGGAAAACAGCCACCTCTGCCAAA
GTCGCCGCTTTAGGCCTGTCAGCCATAGCCATATGCCTCCTGTAAAAAGT
AGCCGTGATTGTGACTTGGTAGGAGCGTTAGTCGCCTTATGTTCGACCAG
CGCGGCGCGTATTCGACCGTCGTTCGTGTGAATACAGGTTGGTCCTGCCT
GCACTGGTCTGTCTACAACGGAAATCCGGTGGTCACTAGGGCATTGATGC
GCGCCGGTGCAGCGAGTGGGTACAAGAGAGCATCTACCAAGCGGACGCAG
GCAAACAAACCACAACCATTCGGAGGTTTAGGCTATCATTGTCGTCTTGT
TGTGAATATGTGAAACTGCAACATGTTTTTCGTGAACAGAACACATTTTT
GAATATGCGGGGGCGTTTGTTCATGATGCACCAAAAAGTGCCCTTATGCT
GGGGTAATTTCTACGCAATATAAACACAAGGATACCCTTACCTTCAGTTC
TAATGCTGTCGCCTTCGGTACGTCGCAGATATGCATCCTTCTGATCGAAG
TCTTGACTAGTGCTCGACGCGATCAGGCAACCAATCGGATCGTTTCGGTC
TCACGGAATCTTGGTCCCCCCAATATGGAAACGGGAATACGGTGGCTGAC
ACTGCTGGCGTGAAGTTCGTGTCGGATAAGCGCTATCATCGTGTCACACG
AACCGATCAAATCGAAAACATGCTGCTGACTGAATCCACAGAGTTGTTGT
TGAGAATCTCAACGACCTCAGCCGGTCTTTCATGACCATGCGACTTCGAC
TCGGCGATGTTTCATGTTCGACAGACAGCGCCCAATTTGTACCTGCTGTT
GTGTTCTATCCGTTCTGGCGTCTGTGGAACTATGACGTCGACAACATTCA
TTCGATCCCCTCGCTATGCAACGCCGGTGTAGCTTTTGGCCTCTAAGAAC
TTGAAACAACCGCTACGAAACGCAAGCAATATTTTCTCTTCATGCATAAC
CCCCCATATCAACACACACCACGCACCCCGGACCGAAAGCAGGGGCACAA
GCCGCACAACAAACAGAATAACGTGGGGCGGGCCCCAACTTCAAGCATCC
CGATGACGGGCTCGCCTCTCCACTGGTCCGCCTACCGCGGAGATCTTGGT
ATTACGTGGATACTGCTCAAGGTTTCGTGTATCATCTGTTTATTTGGTGG
AAGTCTAAGTTACTCTGGAACCGATCAAATATTAGCGTTTGATAGTTCGG
GGATAGCGGGTTTTGTTCTTGTTCAAGTGTGCAAGGATGTGAAGACACAC
ACTTGACATATTTTGATCGCAAGTTCTTTGTAAGCGGTAAACCGATCGGT
CTATATCAAGATCTGTCTACGTAGACCGGTATTCTCTACACATCGAATAG
AGAGGAGGCAGACAGTAAAGCATTCGTTGAGTTCGTAACACAGTGTGCCC
CGTTGGTTGTATTGCGTGAGATACGTTGTCTCACATACTTCAATTTGCTT
TGGTGTGGTTCGTAGATTAACAAACGCACAAAACCGCGAAGTATCAGCCT
TACAAGGGCTGGCTAGATTTTAGTTTTGCCGTCGTTCGCTCACGCGTCCC
CGCGATCCCATATGTTTTTTTTTATGAAAAATTTCAATTATTTCGCTTCG
TGGTGCTTGCAGGAAGGCTTCTCTCCCAACGACACGGACGACATGGGGAA
CACGGTCACGCACTTGGCCGCAGCAAACGGGCACGAGGTTAGCTCAGCTC
GGCTCAGAAATACACGCCTAGCGTAGCAGCAGCATTTGCACCTTGCTCCG
CTTTCGTTTCAGTTTTCCATTCCAGATAGAGCTGGCCACCTCGCCATTTA
GCCGGCCGCCATATGGGTAAAGGCCTAGTAACGGTGCGTATGTGTCTACG
CTTCGATCGGAATTGGCAGTATTTTGTGTGTGAGGTCACTGAAGTGAAAC
AGATGACTTCCCAAATGGCCAAGCAGAACGTATTACACACACCAGGCCGA
TTTACCAATAGTTTCATCCCGTCCTGGCTACTGCCAGCATCGGCCTCTGT
TACCGTCAGCGTACACATGTGGAGTGAGCAGCTTTCGTCATCGACCTTGT
AGCGAAGAATCCGCTTCAACCCATATCCGATATTCCGACAAGATTTACGC
AGCGCATAATGTATGTTATCTCAACGAAGACACATTATCCTCAATCTGTA
GTCGTCAGTACTTTCGCAAATTAATCGCCACAGCGAGTCTTGGACACGCT
GATTCGAGACGGAGCGGACGTGCACAGGCAAAACAAGTTCAAGAACACGC
CCTACGATGTGGCCAACTCGGCGAATTGCCGCGGCATCCTCAGGCGGGCG
GAGGCGCTGCCGGCGCCATCCGCCGAGGAGGAGCAAAAAATGCACCACGA
AAACCTGCAGGTTGGTCACGAGGACATGAATCAGTTCAACATATACTTCG
GAGTATAAATGTATACATATCTTGAAAATCGCTTCTTTGAGTGCGGTCGC
GTTAGCCGCCAAACCCCTCATGTGCGTACCAGGTGTATACCGGTGTGCAA
GCCTTTTGGGAAGATGTTACAGTTGATAATAGTAGGCACCAAGCACGTTC
AAGCCTTGACAATGCGAAAGTAATCTTGGAGAGGGTAGCCGCATTGGGGG
TGGTTCGATATGCATCATTGGACATAAACCCAAAACGCTTGAAAACAGGG
TACGACGGAGTCTTCACTGTGCAACGTCGAAGCATGATTTTCTATGTGCG
TGATCGAGACACTCCGGCTGTATCTAGCCATTTCCTCGTGTCTCGCCGCC
ATGCGCGCTTCCCTCTTGCCCGTGCCCCCCGATCTATCATCATTGTTGAT
GCTCGTTTGTTGTTAAAATACGTATATTCTCGTAGTAGGTTTCAAATCCA
GGATAACCGTATCATTCGTTTCCAAATCACATCAAACCTATTCGAGCCCC
GTCAAAATGCATCATGTGTGATCAACGTCCCATGCTTTTTTGTGGACTCG
GGCGCCACAAAACAGCGAATACTCCAGGTGGAACGGGTGCTTCTCGAAGT
AGTGGGGCCTCTGGAGCCCACGGACGACAAAAAAGGACGCCGGAAGCGCG
AACTCCAGGAGCAGGAGAGAGACGCTGGTGGAGAGGATGGTGGAGAGGAT
GGTGGAGATGATGAGGAGGACGAGGCGGGCAGGCTCAGCGGAGACAAGAA
GGGCGAGGCGGAAGCAACGTCGGGAGAAGCAGCCGAGAGCGACGGTCGAG
ACGATGGGGGGGAGAAAGAGGACGGGGGTGCAGGTGCAGGGGCGGGGGAA
GGCGACGCTGCTTCACAGGACCAGAGTGGCAGCCCTCTGGTCACAGTGGA
TAAAGGAGCCGACGATCGTACGGAGGGAGATGCCAAAAGCGACGAGGGGG
CAGGGCAGGATGGCGCAGCAGCAGAAGCAGCAGCAATAGCGGAGGGGAGA
GAAAGCGGGGGCGGTGGAGGGGGACAGAACAAAGATGCCGGGAGCAAGGA
CGTTGGCGGAACCGACGGAGGGGGTGCAAGTCGTGGTGGCGCTGAAGATG
GTGACACTGAGCCAGGAGAGGACCTTCTGGCTCAGGTGTGAACGAGCAGC
ACACACACAGAGGTAGTGAAGCGAACGCCGCAGAAGTGGCGCTTTATGAG
TTTTGTTTTGAAATTATTGCCAGGGTGTAATAACGCAGTACCTCACGTAG
ACGGTTAAATAGATTTTGTAAATGCGCTCCACGCTTGCGGAGCGGTTGTT
ATGTTCGCGTCGCTTATTCGCTCTCGCCTCTCTCACTCCTACCCGCGCCG
GGGTTTGCATCAAAACCAACGACATGATTCTGGAAAGGTGGAGCAGATCA
GAGAAGCTGTGGCAGGGGCCGAGGCTTTGTGCATCTGTGAAGACCTTGTG
GCGGTGAGGTCGCTGTTCAGGTTTTACTTAAATCAATAGCTTTTCTGTAC
GAGAAATGTTACAAATATACGAAATTGACACCTCTAAGACGCTGTGCGAA
TCACACTTGCAGACACAAACCGTTTCCTTTGCCGATGTAAAGAACCTTGC
TTTTGCGAACCTCAAAGTTTTGTAAACACCTATCACGTCGATACAGTACC
GCACACGAAGAACATCTCTAAATTTGGATATAACTTTTTCGACAGCCAAA
AGAGGGACGAAACAACCGCCGCGGCTAGAAAAGGTATCGAGGGTGAAACA
ATGTTGAAGGAGCGGTTTCTTGCATTAACAATGGCACGTAGTAGCTACAC
TCATTTCGTGGTCTGTACGGTTGTGCCACGACGTTGTGTTTCCAGCCCGC
ACATATGGCTGCCGCTCTCGACGCGTGCCCCTGATTATCCTGCTTTTTGG
ACGCCGGGCACGCATATGCGTATGCGCTTGATTTGCGGCACGTCGTCGAG
GTGTTATATTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTTACTTCCTTTTCCCGATTCCCCTTTTTATCTTTCTCGGGACCTGCAC
CTGATACAGGCGGCAAGGCGCAGGATAGAAGGCCTTCTCCTGCAGCACAG
TATAGAAAAGCAGGTGGGTTTGCTGCTATTGCCTCTGGTATCTTTTTTTT
CATCAAACGAATATGGGTATGTAAGTACTCTGCTCTGGATTAAGGTTACG
CTGACGCGCTCCTTCCCGCCGGGGTCAAGCTCAACGCTCCGGGTGCGTGT
GCGAGGGCAAGTGATGTGCAAGCTTTGGCTCAAGGGCAAGGGTAACCGCA
CAAACCGTTCGGCTGTGCACGACTGCGCTCCTCTGAGGTTTTAACAAGAA
GCATGACGAATCATCGGCCCTCCTCATTCAATTTTGGCGATTCAGGTATC
TCAAGTGTCAGCAAAGGGACCCATCGTTACGCAGCAGGCCTACACAACTC
TGGTGAACCGACTGACGCTTCTGCTACGACGTGCAGAGGGGAATTCGCTG
ATAACCCGCAAGCTCAAGAAGAGGGCGAAGGTATAGCAATTTTGCTTCAA
AGATGGGGCAGCACAATCGACACTGAGAAGGAGGCGAAGGAGAAATGTGG
TGGGAGATCAATGCTCATGACAATGTATGGCCGTAGTCTGAGGGCCTAAC
CCTAGCACCCCTGCAACGCCAGGACCACAGACGTATACTTACACCACGCA
CGGGGCACCGTGAGGCGTTCGGCGAGTCGTGTAAAGGGTGAGCTGCATCC
GACGAAGAATCGTTAATATGGCGGACTTCGGCATACGTAAGTTTCTTTAT
TTCTAGCATATGGGTTGCATGCAGCTTTAAAAAAAAAGGTCATGTATTTT
CCGGTGTGGCCATTTCCAGAGACAGACGTGTGTATACATGTACTAAATAA
CAGCCTTGTGGGTGCCTCGCCTAATATGCCCTTTGTGATGCGAGCATCCC
CCTCACGTGGAGTGGGGATTCTCCACCCCGCACAATTTGACCTAAGAAGT
CGATCACCACCATGGCCACGACAAAACTGAAATACCAAAACAGCACCCTC
GTGGTCTATCTCCCGCAGTGAGTGGAGTCGTTGACATCGTCATTGCCAAA
CGACGACGCCAGCCGGGTGGGAGGAGCAAAGCGAGCTGATGAAATTTCAC
AGAGTGGTTTTCGTTCATATGCGTCCTTCGTTTTTTTTTGTTAGTTTCGT
GCAGCCAACCGCATCTGTGCGCCGACGAGGTACACAGGATACATAACGCA
CACATAGTCGGCAAGAGGACAAACACCCCTCTCTTAATTCTTGCACCAAC
AAAGTAGGCTCTGGTGGAGAAGAGCCACGGCGAATACTGGCTGCAGGTGT
CCGCGCAGCGCCTGCTCAAGGTCAAGTGCGCGGAGGAGCGGCACGTACCG
GACATGGCCAAGCTCGAGGCGTGCATCAAAAAGGTGCATATCATTGGCTA
GTATGATAGGCGGGGAATATTTACAGCCCCCCCCCCTCCCCCATGATCGT
CTTTGGATGGAGGCGGGAAAAGTGCAAGGATAAAGGTTGGTGCAGCATGC
ATCATAATCAAGATTTATTTTGTCGAAACTTGCATTCATCACGTCAAGAA
GAAATGCAGTGTTGGAAAAAGTGTGTGGCGTTGAAAACGTCTTGTCGAGA
GCTTTCCAAAATTGTGTCGTTTGGTATTGGTACGCTCTATGTTACGGAGT
AATCGAGCTTCGGGCATATATCCAGTGGGAGTTCCGCGATACACTGTCGT
CGACGTATACCGTATACGGTGCTTGTGTAGCCCGACCTCTGTTGTGGGCC
ACACTCATTTGAAGTTAACTAGAACACCACGGATTACGCCTCTGCATCCG
TTCCCCACCCCGTCGACAAAACACATTTTGGGTCCTGCGAGCCCGACCAA
TATTCGGCGAGTCAACATTCGCCGTCATCGCTGCGGTAAACGTGTTTGGT
ATGTGAAAGCTTGCCCTTTTTTATTGAGGAGGAGTATCGACCGGAGGGAA
CCCACCCCCGTTTACTTCGTTTCCTCGTATTCTACGTGCGGTAGGCTGCT
AAGGTCGGGGCTCAGGCGCAACTGGTACGGGATTGCCGGTCACTGTTGAA
ACGTCTCACAACCGAAGTGGAGATCAGCAAGGCAATCACGGGTTTCCCCA
CCGTCCGCCTTCCTATCGACGTGAGTGACCAGACACTTGGAGGACACGCT
CAAACACGTACAAGCCTCTGCAACAACCCCTATGCCTGACAGTGTTAGAT
TGGTCAACATACAGGCTTCCCCAGCAGAGGATAAACCAAAGTACTGTGAG
AAGACCGCGTTTCAATGAGTCGGTACCGTGTTTAGGGAGGCTCTGCAGTG
TTTGTTTTTCAACCAACGAAGCGCTTTATTTGCATCGTTGATTGTGTACC
GTTTCTGCCGGCAGAAAACGCTTTACCAAGCTCTGTCAATAAGCAACTGC
TGTCTGCCCGAGCGCAGAGAGCAACCCGGGAGGTTCTGCCGATGTATAGC
CCGCACTCCCCGTTCTGGTACTCAATACACACATCACCAACACAACCACG
AAAAATCCATAACTAATTGCAGTTGTCTTAGCCACTCCCTCTGTGCTCCC
CGGAATCAATGGACAGGCTCGGCACGTGTCGCAATCCGTCAGTTTTCCCA
TCCTTCCGTCCACAACTGCGAAAGGTTTGCCATCCTCGCGCACACCAGCC
ACCAAACAATTTTCGGCAGCTATGCCTCATAGAATCCGCCTTTCCTCACG
CCAAATCAGTCCGACATGCACGCACTTGTTTACGAAACAGCCTTCATCAC
GTTGCCGGCCAAAAACTGAGCAACTGTACTACAAATGTTGACTAGAACTT
CCTCCCACCCCCACCCTCCACCCGGTGGTGCGTCCGCCTTCGGTGACCGA
TGACTGGGAGCAAATGAAACAGCCGATGCCGAAGGACTATTGGCAGCCCG
AAGATATTGGACACATCGAGGAAACAGAAGGCTTCCCGCTTCCCCCCGTC
GACGCCGACGGAAAAAGCCTGGACTACGTCTGGGTGCCATCCAAGTCGCT
CAGGGCTCTCTCGGCCGCTTGCAAGAGGATGTCAGAGGCATTGGGCGGTG
GAGAGGTAAATGCCTGTAGCCCACGTCATGCATATTTCCATATCTGTTAC
TCCTTACCATGATTCCGTGAAGTCGTGGCCTGTTATGTAGCTCCTTCCCC
CACTGTTCTAGTAGTTGATCGTCGTATTAGGAAATGGTGGTACAGGATAC
CCCAATCAACGTGCGCAACAAATAACAAATGACAAAAACAAATCGTCACA
ACCCAAACACTTGTCGTGGTTATTTTACACACACACATTCTGCCTGGTTT
CACAACACGGATGGTTTTAATATGAACTTCGTCGTAGGGTTTTCACCCGC
GCATACCGATATTCTGCCTGAGTTCATAACACAGACGGTTTTACAAGGGG
GGTGTAATCTTGAAACTTGTTTGCCTCAGGCGATTTGTCTTGATTTTTTA
CCATAAAACAAGTTGCCACGATATTTGAGGGAATATCCTTCTTCTCTGAA
ACCTACGCTGCGGGTCGGCTGCCACCCTGTTGTTGGCGAATACAGGGCCT
CAACCCCGAGCTGGTGGAGCGCGGCGGCAAAAAACTTCATGAGCACCACA
AGGTACGTTGTTGCCACAATTATTCTCGACACTGATACCCTTCCCAGCCG
ATGAACGGTTGTCGTCTCATTTGTGAATGTTTGGTCGAAGCTTTATTCTT
CCTGCTACTTCTTTCTCTCCGCCTGCCGCCATAGTAATCTCTGGCTGAGC
AAAGTCTCCCCCGCTACAGTACAATGGGCCCGACCCCCGGGATTCCCGCA
GCGCAAGTATCGGTTTGCGAAGGCACACGCTTCGGAGAGGCTGAGACGCA
CGTACACCAAGTACACGCGCTTGTCATTCATTTTTTCGAGTCTCGTTGCA
GCATTGATGATACACACATCAAGATACCCATGCCCGCACACACACACACG
CGCGCCCAGGAGCTGAAGCTTCTTACAGAGAAGGACACGGCGGACAAGGA
CAAGGCCCACTCGATCGCCACCAAGGCCGCCAAGAAAAAGAAGAAGAAAG
GGGGTGGCGGCAAGAAGAAAAAGAAATAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig88:580254..590682-

>mRNA_P-littoralis_Contig88.117.1 ID=mRNA_P-littoralis_Contig88.117.1|Name=mRNA_P-littoralis_Contig88.117.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2166bp|location=Sequence derived from alignment at P-littoralis_Contig88:580254..590682- (Pylaiella littoralis U1_48)
ATGGACGCCGATCCTCTCGCCGCGATCCTTGGAGAGAAGGAAGAGCTGGA
TGAGAGCGATTACCTTTCAGTCAAGAACCAAGGCTCTAAGGGGAATGACC
CCGAGCAACTTGCCCCGGACCTCCTCGCGGCCTGCAAGGAAAACGACGAA
GGACGTGCGAAAGATCTTCTAGCCGACGGCGTTTCACCGGGCTATTCAGA
CCCGGACTCGGGTTGGTCCTGCCTGCACTGGTCTGTCTACAACGGAAATC
CGGTGGTCACTAGGGCATTGATGCGCGCCGGTGCAGCGAGTGGGTACAAG
AGAGCATCTACCAAGCGGACGCAGGCAAACAAACCACAACCATTCGGAGG
TTTAGGCTATCATTGTCGTCTTAATAACGTGGGGCGGGCCCCAACTTCAA
GCATCCCGATGACGGGCTCGCCTCTCCACTGGTCCGCCTACCGCGGAGAT
CTTGGTATTACGTGGATACTGCTCAAGGAAGGCTTCTCTCCCAACGACAC
GGACGACATGGGGAACACGGTCACGCACTTGGCCGCAGCAAACGGGCACG
AGCGAGTCTTGGACACGCTGATTCGAGACGGAGCGGACGTGCACAGGCAA
AACAAGTTCAAGAACACGCCCTACGATGTGGCCAACTCGGCGAATTGCCG
CGGCATCCTCAGGCGGGCGGAGGCGCTGCCGGCGCCATCCGCCGAGGAGG
AGCAAAAAATGCACCACGAAAACCTGCAGCGAATACTCCAGGTGGAACGG
GTGCTTCTCGAAGTAGTGGGGCCTCTGGAGCCCACGGACGACAAAAAAGG
ACGCCGGAAGCGCGAACTCCAGGAGCAGGAGAGAGACGCTGGTGGAGAGG
ATGGTGGAGAGGATGGTGGAGATGATGAGGAGGACGAGGCGGGCAGGCTC
AGCGGAGACAAGAAGGGCGAGGCGGAAGCAACGTCGGGAGAAGCAGCCGA
GAGCGACGGTCGAGACGATGGGGGGGAGAAAGAGGACGGGGGTGCAGGTG
CAGGGGCGGGGGAAGGCGACGCTGCTTCACAGGACCAGAGTGGCAGCCCT
CTGGTCACAGTGGATAAAGGAGCCGACGATCGTACGGAGGGAGATGCCAA
AAGCGACGAGGGGGCAGGGCAGGATGGCGCAGCAGCAGAAGCAGCAGCAA
TAGCGGAGGGGAGAGAAAGCGGGGGCGGTGGAGGGGGACAGAACAAAGAT
GCCGGGAGCAAGGACGTTGGCGGAACCGACGGAGGGGGTGCAAGTCGTGG
TGGCGCTGAAGATGGTGACACTGAGCCAGGAGAGGACCTTCTGGCTCAGG
TGGAGCAGATCAGAGAAGCTGTGGCAGGGGCCGAGGCTTTGTGCATCTGT
GAAGACCTTGTGGCGGCGGCAAGGCGCAGGATAGAAGGCCTTCTCCTGCA
GCACAGTATAGAAAAGCAGGTATCTCAAGTGTCAGCAAAGGGACCCATCG
TTACGCAGCAGGCCTACACAACTCTGGTGAACCGACTGACGCTTCTGCTA
CGACGTGCAGAGGGGAATTCGCTGATAACCCGCAAGCTCAAGAAGAGGGC
GAAGGCTCTGGTGGAGAAGAGCCACGGCGAATACTGGCTGCAGGTGTCCG
CGCAGCGCCTGCTCAAGGTCAAGTGCGCGGAGGAGCGGCACGTACCGGAC
ATGGCCAAGCTCGAGGCGTGCATCAAAAAGGCTGCTAAGGTCGGGGCTCA
GGCGCAACTGGTACGGGATTGCCGGTCACTGTTGAAACGTCTCACAACCG
AAGTGGAGATCAGCAAGGCAATCACGGGTTTCCCCACCGTCCGCCTTCCT
ATCGACCCGATGCCGAAGGACTATTGGCAGCCCGAAGATATTGGACACAT
CGAGGAAACAGAAGGCTTCCCGCTTCCCCCCGTCGACGCCGACGGAAAAA
GCCTGGACTACGTCTGGGTGCCATCCAAGTCGCTCAGGGCTCTCTCGGCC
GCTTGCAAGAGGATGTCAGAGGCATTGGGCGGTGGAGAGGGCCTCAACCC
CGAGCTGGTGGAGCGCGGCGGCAAAAAACTTCATGAGCACCACAAGGAGC
TGAAGCTTCTTACAGAGAAGGACACGGCGGACAAGGACAAGGCCCACTCG
ATCGCCACCAAGGCCGCCAAGAAAAAGAAGAAGAAAGGGGGTGGCGGCAA
GAAGAAAAAGAAATAA
back to top