mRNA_P-littoralis_Contig88.107.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: A0A6H5LBI9_9PHAE (PLCXc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBI9_9PHAE) HSP 1 Score: 795 bits (2054), Expect = 6.530e-285 Identity = 391/514 (76.07%), Postives = 440/514 (85.60%), Query Frame = 3
Query: 69 MAAHQGNDGAGRLVLTNATPYVWKRSLKKPKGMKLWTFPETVDPGASVVVLIAFADGDGAHGQASYQMELEEGESGPGNPTFTLSATANGLLAELPAEMRKPGWFAVPPAPNKIAEESWQKGCAVSFTIGALGEEHASLRGGHVARSFKGVKMAALRGAAGVGGR--RENRGALIPKGTSSAGESXXXXXXXXXXFGGIGRHLQAVTETAGCLLNDCGIGAPPRPAGGKGEGGWTVEWMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWATTQNLSVEAQLKAGVRVLDFRCGYVGLDAQNYDHVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPSELVLLDFHRFPGLGHGPPHEKAAAVVMRVLGGDEGVMVLPKFRSMPFGKIMSQQKGRVAVLWNALEAREPEFWPGVRQAWTGAENLRSLHDMVKAELGEKKGQLWSLPVVLPAGVPKPVPHIAEQVDDWLSVGGVWQDNANIVACDFIEETQVVRNCVGACLVKMARASA 1604
MA +G+ AGRL+LTNATP++WKRSLK PKGM+LW+FP+ VDPG SV V IAF+ HGQASYQMELE+G+SGPGNPTFT+SAT NGL ELPAEMRKPGWFAVPPAP+K+A+ WQKGC VSFTIG+LG +HASLRGGH RSF+GVKMA+LRGAA GG RE RGALIPK SSA + XXXXX FGGIGRHLQAVTE+AG LLNDCGIGAP RPAGGK EG WT EWMK+YA ALA+LKLSEMSLPGTHDSGTAKM+NPVV PWA TQNL V AQLKAGVRVLD RCGYVG +AQ D V DG+A+VH KHRTS+SLR+AL VK FV+ HPSELVLLDFHRFPGLGHG PHEKAAAVV+ VLGG+E VM+ PKFR +PFG+IMSQQKGRV +LWNA+EAREP FWPGVRQAWTGAE++RSLHD+ +AEL EK G LWSLP+VLPAGVP+PVPHI E +DDWLS GGVWQD+A+IV CDF+EETQ+VRNCVGACL+KMARASA
Sbjct: 1 MATRRGDRDAGRLILTNATPFLWKRSLKTPKGMRLWSFPKEVDPGESVEVEIAFSRRANVHGQASYQMELEDGQSGPGNPTFTVSATVNGLSVELPAEMRKPGWFAVPPAPHKVADTGWQKGCVVSFTIGSLGGQHASLRGGHTPRSFQGVKMASLRGAAAFGGNGNREGRGALIPKRQSSARGNGXXXXXVEGFFGGIGRHLQAVTESAGGLLNDCGIGAPARPAGGKAEGDWTTEWMKTYASALANLKLSEMSLPGTHDSGTAKMHNPVVSPWAKTQNLGVLAQLKAGVRVLDLRCGYVGREAQKNDRVQDGIAVVHDKHRTSLSLRKALECVKGFVQAHPSELVLLDFHRFPGLGHGAPHEKAAAVVLSVLGGEEPVMIHPKFRHLPFGRIMSQQKGRVGILWNAVEAREPHFWPGVRQAWTGAESVRSLHDLAEAELAEKNGLLWSLPLVLPAGVPRPVPHIPEHLDDWLSAGGVWQDHASIVTCDFVEETQLVRNCVGACLMKMARASA 514
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: A0A0E3JNI5_CLOSL (1-phosphatidylinositol phosphodiesterase n=2 Tax=Clostridium TaxID=1485 RepID=A0A0E3JNI5_CLOSL) HSP 1 Score: 151 bits (382), Expect = 2.210e-36 Identity = 94/284 (33.10%), Postives = 145/284 (51.06%), Query Frame = 3
Query: 750 GEGGWTVEWMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWATTQNLSVEAQLKAGVRVLDFRCGYVGLDAQNYDHVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPSELVLLDFHRFPGLGHGPPHEKAAAVVMRVLGGDEGVMVLPKFRSMPFGKIMSQQKGRVAVLWNALEAREPEFWPGVRQAWTGAENLRSLHDMVKAELG---EKKGQLWSLPVVLPAGVPK--PVPHIAEQVDDWLSVGGVWQDNANIVACDFIEETQVVRNCVGACLVK 1586
G+ + WM++Y + + L +++L TH+SGT M +P PW QNLS+ QL GVRVLD R VG D N+ +VH R+ ISL AL+ V+ F+ +P E+V+LDFH F L K +V LG ++ +P + + RV V W+ + EF+P + Q W +NLR L+ ++ E+ + KG LWS ++ P+ I+E + +W GG W +ANI+A DF+E+T +V+ + CL+K
Sbjct: 212 GDSAYLKNWMETYGSVIKNTPLDDLTLVCTHNSGTYNMVSPFGSPWTKCQNLSISDQLNKGVRVLDLR---VGEDNGNF-------ILVHDTWRSEISLEDALKQVQGFIARNPKEVVILDFHSFIALNGQFDENKLYNLVTTSLGN----LIYHYNGHVPTLSEIWSTQSRVIVSWSGNN-KPTEFFPVIDQKWFNKDNLRDLYSAIQDEMKNNHDNKG-LWSTCAIITPSASNITPIQSISE-LSNWFQAGGEWAKDANIIAVDFVEKTNIVQQAISECLIK 478
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: UPI00106A8DB1 (uncharacterized protein LOC114520878 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A8DB1) HSP 1 Score: 123 bits (308), Expect = 1.060e-26 Identity = 97/295 (32.88%), Postives = 144/295 (48.81%), Query Frame = 3
Query: 771 EWMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWATTQNLSVEAQLKAGVRVLDFRCGYVGLDAQNY--DHVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPS--ELVLLDFHRFPGLGHGP----PHEKAAAVVMRVLGGDEGVMVLPKFRSMPFGKIMSQ-----QKGRVAVLWNALEAREPEFWPGVRQAW-TGAENLRSLHDMVKAELGEKKGQLWSLPVVLPAGVPKPVPHIAEQVD----DWLSVGGVWQDNANIVACDFIEE-TQVVR-NCVGACLVKMAR 1595
+WM Y+ L L L+EM+LPGTHDSGT + + W TQ+LS+ QL+ GVR LD R G QN D+V IVH K RTS +L AL+ + F+ + + E+++LDFHRF LG ++K A + L G +LP GK + + KGR+ V WN + WPGV Q W A+ L L+ +K ++ LW+ + + P A D W G + + ANI++ DF+ + T VV+ + +G+ L+ A+
Sbjct: 165 KWMSYYSDVLGKLTLTEMTLPGTHDSGTHDPKSSLGALWIKTQSLSLGQQLQFGVRALDLRIG------QNSPGDYV-----IVHDKWRTSYTLAAALKEITDFIDQDSTNKEIIILDFHRFVKLGRRVRRRYDYDKLKAQIRSCLTG----YLLPVQNG--HGKQLQEIWQTCGKGRLVVAWNTSNP-DSYMWPGVNQRWYANADTLIKLYGAIKTDMLNPPSGLWASCSFMESSAVHPPSRNAIAADPTIKQWYYGGSTFCEKANIISVDFVRKYTNVVQASIIGSLLLAGAK 441
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: UPI000D7982C5 (hypothetical protein n=2 Tax=Pseudomonadaceae TaxID=135621 RepID=UPI000D7982C5) HSP 1 Score: 97.8 bits (242), Expect = 9.530e-18 Identity = 70/214 (32.71%), Postives = 105/214 (49.07%), Query Frame = 3
Query: 774 WMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWATTQNLSVEAQLKAGVRVLDFRC----GYVGLDAQNYD--HVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPSELVLLDFHRFPGLGHGPPHEKAAAVVMRVLGGDEGVMVLPKFRSMPFGKIMSQQKGRVAVLWNALEAREPEFWPGVRQAWTGAE-----NLRSLHDMVKAE 1382
WM Y A A L++ EM LPGTH+SG+ K + + T Q++S AQL+ G+RVLD R GY D + + H D V G L+A K +P E+V+LDFH+F H + A V+ + G ++ PK++ + ++ + QK V + ++ R+P+FWPGV Q W G + L+S D V E
Sbjct: 89 WMGYYPGATASLRIDEMILPGTHNSGSDKQAD-YTNSYDTCQDVSPHAQLQTGIRVLDLRVRFYPGYPAGDWKRFMIYHSLDSGRTVRG---------DILQAAMNLYKAYPKEVVILDFHQFSNFTDAA-HRELANVIKQTFGDK---LIEPKWKPLVLRQLWALQKN-VVIAYDD-NRRDPQFWPGVNQRWIGKDIPSSSELKSFIDRVGNE 286
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: G8Q0P0_PSEO1 (Uncharacterized protein n=3 Tax=Pseudomonas ogarae (strain DSM 112162 / CECT 30235 / F113) TaxID=1114970 RepID=G8Q0P0_PSEO1) HSP 1 Score: 94.4 bits (233), Expect = 1.420e-16 Identity = 82/285 (28.77%), Postives = 133/285 (46.67%), Query Frame = 3
Query: 774 WMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWATTQNLSVEAQLKAGVRVLDFRC----GYVGLDAQNYD--HVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPSELVLLDFHRFPGLGHGPPHEKAAAVVMRVLGGDEGVMVLPKFRSMPFGKIMSQQKGRVAVLWNALEAREPEFWPGVRQAWTG-----AENLRSLHDMVKAELGEKKGQLWSLPVVLPAGVPKPVPHIAEQVDDWLSVGGVWQDNAN-------IVACDFIEETQVVRNCVGA 1574
WM Y A A+L++ E+ LPGTH+SG+ K P + T Q++S QL+ G+R LD R GY D + + H D V G L+A +P E+++LDFH F E A V++ GD+ ++ PK++S+ ++ + QK V + ++ R+P+FWPGV Q W G ++ L+ D V +E + +L ++ V +P ++ V +W S DNAN I+ D+ + + NC+ A
Sbjct: 181 WMGYYNGATANLRVDELVLPGTHNSGSDKQA-PYSNSYDTCQDVSPHTQLQTGIRALDLRVKFYWGYPAGDWRRFTIYHSLDSGRNVRG---------DILQAAMNLYNAYPQEVIILDFHEFRDFTDAAHRE--LATVIKTTFGDK--LIEPKWKSLVLRQLWALQKN-VVIAYDD-NRRDPQFWPGVNQRWIGKNRPSSDELKEFIDEVASET-KPTYELRAIQAHKYTKVGQP-DDMSSDVMNWFSA-----DNANSPIQKFYIINTDWSLRHRHIDNCIHA 442
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: A0A1I5EX81_9PSED (Uncharacterized protein n=2 Tax=Pseudomonas TaxID=286 RepID=A0A1I5EX81_9PSED) HSP 1 Score: 93.2 bits (230), Expect = 2.930e-16 Identity = 68/213 (31.92%), Postives = 102/213 (47.89%), Query Frame = 3
Query: 774 WMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWATTQNLSVEAQLKAGVRVLDFRC----GYVGLDAQNYDHVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPSELVLLDFHRFPGLGHGPPHEKAAAVVMRVLGGDEGVMVLPKFRSMPFGKIMSQQKGRVAVLWNALEAREPEFWPGVRQAWT-----GAENLRSLHDMVKAEL 1385
WM Y A A L++ EM LPGTH+SG K P + T Q++S +QL+ G+RVLD R GY DA+ + I H + L+A + +E+V+LDFH+F H + A V+ LG ++ PK+ + ++ + QK V + +N + R+P FWPGV Q W + L+S D V E+
Sbjct: 89 WMGYYPSATASLRIDEMILPGTHNSGMDKQA-PYSNSYETCQDVSPHSQLQTGIRVLDLRVEFFFGYPVGDAKRF-------MIYHSLNSRRTIEGDCLQAAINLYTAYGNEVVILDFHQFKNFTD-TAHRELATVIKNRLGSR---LIEPKWNVLTLRQLWALQKN-VVIAYNHSQ-RDPLFWPGVNQRWIQKNMPSSSELKSFIDQVGNEI 287
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: K9NJB7_9PSED (Uncharacterized protein n=5 Tax=Pseudomonas TaxID=286 RepID=K9NJB7_9PSED) HSP 1 Score: 89.0 bits (219), Expect = 6.620e-16 Identity = 81/287 (28.22%), Postives = 132/287 (45.99%), Query Frame = 3
Query: 774 WMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGP---WATTQNLSVEAQLKAGVRVLDFRCGYVGLDAQNYDHVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPSELVLLDFHRFPGLGHGPPHEKAAAVVMRVLGGDEGVMVLPKF-RSMPFG---KIMSQQKGRVAVLWNALEAREPEFWPGVRQAWTGA--ENLRSLHDMVKAELGEK--KGQLWSLPVVLPAGVPKPVPHIAEQVDDWLS-VGGVWQDNANIVACDFIEETQVVRNCVGACLVKMARA 1598
WM S PA+ +L L E++LPGTH++G + + + P W Q+ S AQL G R LD R + G A ++ H +R+S +L AV F++++P E V+LDFH+ + +++R LG ++P R +P G KI +Q+ VA + E F + W+G +++ L + L + LWSL + PV I +++D+W + NI+ DF+EE+Q+V C A L+ +A
Sbjct: 14 WM-SATPAIDNLSLGELTLPGTHNAGCDRQASYPLIPGAHWLACQHDSFAAQLNNGSRALDLRLDFDG-PATEFEKFR----FQHNGYRSSRNLLALFAAVNLFLRDNPDEFVILDFHQLKDGQQSFDYALFNEMMLRYLG----ERIIPTGNRGLPLGELKKISGKQRVLVAAQQHP-ELNPAWFCEKIEHKWSGIGDTSVKELEQHITNVLRSPPPRTSLWSLSATSYSKAGGPV-DIHDELDNWFDPTTHDRSERCNIINVDFMEESQLVAYCRSASLINARKA 288
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: A0A6H5KAE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAE6_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 1.360e-15 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 3
Query: 69 MAAHQGNDGAGRLVLTNATPYVWKRSLKKPKGMK---LWTFPETVDPGASVVVLIAFA 233
MA +GN AGRL+LTNATP++WKRSLK PKGMK LW+FPE VDPG SV V IAF+
Sbjct: 1 MATRRGNRDAGRLILTNATPFLWKRSLKTPKGMKGMGLWSFPEEVDPGESVEVGIAFS 58
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: A0A139WNA6_TRICA (PI-PLC X domain-containing protein 1-like Protein n=1 Tax=Tribolium castaneum TaxID=7070 RepID=A0A139WNA6_TRICA) HSP 1 Score: 87.8 bits (216), Expect = 6.730e-15 Identity = 80/303 (26.40%), Postives = 133/303 (43.89%), Query Frame = 3
Query: 774 WMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWATTQNLSVEAQLKAGVRVLDFRCGYVGLDAQ----NYDHVADGVAIVHGKHRTSISLRQALRAVKQFVKEHPSELVLLDFHRFPGL-----GHGPPHEKAAAVVMRVLGGDEGVMVLPKFRSM-PFGKIM-----SQQKGRVAVLWNALEAREPEFWPGVRQAWTGAENLRSLHDMVKAELGE--KKGQLWSLPVVLPAGVPKPVPHIAEQVDD-----------WLSVGGVWQDNANIVACDFIEETQVVRNCVGACLVKMARA 1598
WM ++ DL++ +M +PGTH+SG + P + Q+ S+ QL G+R D R G G Q N+D V L L++V +F+++ P E+V+LDFHRFP GH H + VV + G ++ P R M P G + SQ++ ++ + R P WPGV++ W + L++L + VK ++ + + L L L + +I + D W+ + + DN NI+A DF ++ +G K+ R+
Sbjct: 140 WMSNFG----DLRIGDMMIPGTHNSGAWRTKLPGFKNYVLNQDKSMWEQLVYGIRYFDIRVGRYGDSPQSLYINHDFVK------------CTELVPELQSVAKFLQKSPKEVVVLDFHRFPHPKDFLEGH---HLELLRVVRDIFGD----LIYPYSRFMHPKGPKLREFWQSQKRVIISYRQDYFIRRNPWLWPGVQRDWGNVQKLQNLENFVKTKISKPVRGNPLNVLMAELTPNYRNFLQYINTNLKDLALMVNRELTEWV-IENNFADNLNIIATDFFTGNDMISVAIGTNFRKLQRS 418
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Match: A0A0A7JTI7_9PSED (Uncharacterized protein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A0A7JTI7_9PSED) HSP 1 Score: 85.5 bits (210), Expect = 8.240e-15 Identity = 82/294 (27.89%), Postives = 138/294 (46.94%), Query Frame = 3
Query: 774 WMKSYAPALADLKLSEMSLPGTHDSGTAKMNNPVVGPWAT--TQNLSVEAQLKAGVRVLDFRCGYVGLDAQNYDHVADGVAIVHGKHRTSISLRQ----ALRAVKQFVKE--HPSELVLLDFHRFPGLGHGPPHEKAAAVVMRVLGGDEGVMVLPKFRS-MPFGKIMSQQKGR-VAVLWNALEAREPEFWPGVRQAWTG-----AENLRSLHDMVKAELGEKKGQLWSLPVVL--PAGVPKPVPHIAEQVDDWLSVGGV--WQDNANIVACDFIEETQVVRNCVGACLVKMARA 1598
WM S P L L++ E+ LPG+HDSG M+ V G A TQ++ Q++ G+RVLD R + Y A + S S R L +KQF K + E+V+LDFH+F G EK + + G M +PK S + ++ SQ G+ + + +N + ++WPGVRQ W G A L++ D + + + KG+L ++ A + +P ++++D+W + + I+ D+ +++V NC+ AC ++ +A
Sbjct: 6 WMGS-TPELGSLRIHELILPGSHDSG---MDTKVGGVIAQELTQDVPCIDQVRGGIRVLDLR-------VRAYHEYTPDQAYRYQLFHMSSSGRNLFGDVLNQLKQFFKTPANAKEIVILDFHQFERFG-----EKEHGWLREAMNRHFGSMFIPKSLSHLTLDELWSQHPGKNIVIAYNHQD--RGDYWPGVRQVWIGENTPSAATLKAFMDK-QPPVDDTKGELSAIQCAKYNVAELFRP-DDFSDKIDEWFESQDLNSYIQKFRIINTDWSLRSRIVDNCIHACQLRARQA 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig88.107.1 >prot_P-littoralis_Contig88.107.1 ID=prot_P-littoralis_Contig88.107.1|Name=mRNA_P-littoralis_Contig88.107.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=526bp MAAHQGNDGAGRLVLTNATPYVWKRSLKKPKGMKLWTFPETVDPGASVVVback to top mRNA from alignment at P-littoralis_Contig88:541054..549010+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig88.107.1 ID=mRNA_P-littoralis_Contig88.107.1|Name=mRNA_P-littoralis_Contig88.107.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7957bp|location=Sequence derived from alignment at P-littoralis_Contig88:541054..549010+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig88:541054..549010+ >mRNA_P-littoralis_Contig88.107.1 ID=mRNA_P-littoralis_Contig88.107.1|Name=mRNA_P-littoralis_Contig88.107.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1578bp|location=Sequence derived from alignment at P-littoralis_Contig88:541054..549010+ (Pylaiella littoralis U1_48)back to top |