mRNA_P-littoralis_Contig88.105.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: D8LR28_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR28_ECTSI) HSP 1 Score: 557 bits (1436), Expect = 2.990e-189 Identity = 302/438 (68.95%), Postives = 336/438 (76.71%), Query Frame = 3
Query: 171 MRASSLVALP-LRTAFARSSTPSRGGSGVLCAG--------FHVLSGHHSSHRYLRWSQEPRAPNKQRHRYDGLRDGNTGPRGLVVRFLNRVMLEPYEVVEGEEGRLSVTLPAADSRTAHIRGVLKGESGEFLRVGVVNAGRMDDAEITWVEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFLEDELERHFPKDRWVRVLAHPTRLPPQIAR--GAEGKVPATAAG----------------------VEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQFLESFGFQAVTLGSRVLRSDVAVSALLALAHAWVEEREHG 1385
MRA+S V P L TAFARS RGG+ AG H ++GH H +LRW Q R N + RYDGL D N GPR LVVR LNR+MLEP EVV EEG LS TLPAADSRTAH+RGVLK E+GE +RVGVVNAGRMDDA I W EP DPP GAPPPDIPGRQK RKSSPKWMDLV+DLGP+ RQLL+P+P E+RPKVALMLAVPRPLQLERILP+VASLGVTT+VLCQAKKVPKFYFGSHFFRDP S+R KLIEGLSQ G+TV+P+V+VARRL IFLED+L+R FP+DRWVR LAHPTRLP Q++R G E ATAAG VE+ T P P LRFSQ+EPP+GCDPAD GVLVAVGPEGGWVEP+ELQ L+SFGFQAVTLGSRVLRSDVAV+ALLALAHAWV+ER G
Sbjct: 1 MRAASFVTWPSLPTAFARSF---RGGALSHHAGGFHMHHTRMHTMTGH-PGHHHLRWRQPQRWCNTRERRYDGLCDPNAGPRRLVVRCLNRIMLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGRMDDASIAWEEPTDPPEGAPPPDIPGRQKGRKSSPKWMDLVLDLGPSDRQLLKPVPDEQRPKVALMLAVPRPLQLERILPVVASLGVTTIVLCQAKKVPKFYFGSHFFRDPPSVREKLIEGLSQSGDTVMPEVMVARRLKIFLEDDLDRCFPRDRWVRALAHPTRLPAQVSRCAGGEATAAATAAGGEGVGVEAGVVAATAQSGRVDGVESDGAATAPVPALRFSQIEPPKGCDPADVGVLVAVGPEGGWVEPDELQLLQSFGFQAVTLGSRVLRSDVAVNALLALAHAWVDERAAG 434
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A6H5KW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW92_9PHAE) HSP 1 Score: 412 bits (1059), Expect = 8.920e-134 Identity = 228/366 (62.30%), Postives = 261/366 (71.31%), Query Frame = 3
Query: 420 MLEPYEVVEGEEGRLSVTLPAADSRTAHIRGVLKGESGEFLRVGVVNAGRMDDAEITWVEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETV-------------------LPQVVVARRLTIFLEDELERHFPKDRWVRVLAHPTRLPPQIARGAEGKVPATAA------------------------GVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQFLESF-GFQAVTLGSRVLRSDVAVSALLALAHAWVEEREHG 1385
MLEP EVV EEG LS TLPAADSRTAH+RGVLK E+GE +RVGVVNAGRMDDA ITW +P DPP G PPPD+PGRQKDRKSSPKWMDLV+DLGP+ RQLL+P+P E+RPKVALMLAVPRPL+LERILP+VASLGVTT+VLCQAKKVPKFYFGSHFFRDP S+R KLIEGLSQ + V LP+V+VARRL IFLED+L+R FP+DRWVR LAHPTRLP Q+AR A G+ A A GVE+ T P P LRFSQ+EPP+G G+ + W E+ + +F +AVTLGSRVLRSDVAV+ALLALAHAWV+ER G
Sbjct: 1 MLEPAEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGEPVRVGVVNAGRMDDASITWEDPTDPPEGTPPPDVPGRQKDRKSSPKWMDLVLDLGPSDRQLLKPVPDEQRPKVALMLAVPRPLKLERILPVVASLGVTTIVLCQAKKVPKFYFGSHFFRDPLSVRAKLIEGLSQVSDEVRVFRQVKHFDNMENRAAFVLPEVIVARRLNIFLEDDLDRCFPRDRWVRALAHPTRLPAQVARCAGGEATAAATVAGGEGVGVEAGVVAATTQIGRVDGVESDGAATTPAPALRFSQIEPPKG------GIAGSALMHEQWQICFEMSYYATFVKGKAVTLGSRVLRSDVAVNALLALAHAWVDERAAG 360
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A835YRY5_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY5_9STRA) HSP 1 Score: 234 bits (597), Expect = 1.540e-65 Identity = 165/393 (41.98%), Postives = 207/393 (52.67%), Query Frame = 3
Query: 393 LVVRFLNRVMLEPYEV--VEGEEGRLSVTLPAADSRTAHIRGVLKGESGEFLRVGVVNAGRMDDAEITWVEPVDPPPGA-------------------PPPDIP---------------------GRQKDRKSSPKWMD----------LVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFLEDELERHFPKDRWVRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQFLESFGFQAVTLGSRVLRSDVAVSALLALAHAWVEEREHGGHSPSASAQM 1415
L VR LNRVM+EP EV +G E V L D+RT H+R +LK E +R GVV+AG + T P P A P +P R D S+ W+D L +DLG +L P+P RP+V L+LA PRPLQLER+LP+++SLGV +LVL A KV K YFGSH R P+++R KL+EG +Q G TVLP+ + RRL IFLEDELE +P+D +RV+AHPTR D T P P R S + PPE A V++AVGPEGGW EP EL+ E+ GF VTLG+RVLRSDVAV+ALLALAH WV+ SP+A+A
Sbjct: 54 LTVRHLNRVMIEPEEVQLADGGESCFCV-LAHNDTRTEHLRSILKVEDAGTVRTGVVDAG---ECHATGKHASSPHPQAHGGGAACADTMVHASALCTPTAAVPRSAHAVAHRHXXXXXXXXXXAARSCDA-SAVTWLDSAAAERSAAPLRLDLGAP--AILAPLPPRNRPRVDLLLAAPRPLQLERMLPMISSLGVDSLVLINAAKVEKSYFGSHLMRKPEALRAKLVEGCTQSGSTVLPRTTIKRRLKIFLEDELESLYPRDTCLRVIAHPTRA-----------------------DNTTPAP--RLSTLPPPEKATAHTARVVIAVGPEGGWDEPFELEMFEAHGFVPVTLGTRVLRSDVAVNALLALAHDWVDSLAE--KSPAAAADQ 412
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A8J5WZT2_DIALT (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5WZT2_DIALT) HSP 1 Score: 192 bits (489), Expect = 1.260e-51 Identity = 137/326 (42.02%), Postives = 177/326 (54.29%), Query Frame = 3
Query: 399 VRFLNRVMLEPYEVVEGEEGRLSVTLPAADSRTAHIRGVLKGESGEFLRVGVVNAGRMDDAEITWVEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSI---RTKLIEGLSQCGETVLPQVVVARRLTIFLEDELERHFPKDRWVRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQFLESFGFQAVTLGSRVLRSDVAVSALLALAHAWV 1367
R LNR++ EP+E+ GR +V++PA D R H+ +L+ G+ LRVG+V+ DDA + +E GA L I+L + P P RP+V L+LA+PRPLQLERILP+VA LGV TLVL A+KV Y+GSH R R L++GL+QCG+T LP+V A+ L + E+ELE FP+D RV+AHP R A G VP AAG A P + +L+AVGPEGGW EP+E+ LE GF +TLG RVLRSDVAV +LLALAH V
Sbjct: 19 ARALNRLLYEPHEL----SGR-TVSVPADDRRAQHVGRILRRAPGDTLRVGLVDGQPTDDAVLAAIESD----GA--------------------LRIELPAATPDVHAPAP---RPRVDLLLALPRPLQLERILPMVAQLGVGTLVLAGARKVELSYWGSHLLRARDGAAHTRACLLDGLAQCGDTALPRVTRAKDLARWCEEELEALFPRDSVARVVAHPQRAGVP-AHGRLRDVPDPAAGTPAGRGARTP-------------------SRLLLAVGPEGGWDEPDEVALLERHGFMLITLGERVLRSDVAVVSLLALAHETV 292
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A7S1BIA7_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIA7_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.560e-49 Identity = 135/324 (41.67%), Postives = 171/324 (52.78%), Query Frame = 3
Query: 405 FLNRVMLEPYEVVEGEEGRLSVTLPAADSRTAHIRGVLKGESGEFLRVGVVNAGRMDDAEITWVEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQE---RRPK-VALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFLEDELERHFPKDRW---VRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQFLESFGFQAVTLGSRVLRSDVAVSALLALA 1355
+LNR + +P EV E SVT+ D RT H VL ++GE +R G+V G D+A +TW+ P G K +K+ P GP + L IP P+ V+L+LA PRPL L RILP+V+ +GV LVLC A KVPK YFGSH FR + I L+EGL Q G+ LP+V VARRL IFLED+L+ FP RV+AHPTR I++ GK+ VE + G S P +L+AVGPEGGW E E+ GF+ VTLG R LR+DVAV LL LA
Sbjct: 78 YLNRFLFDPSEVDTSGEFP-SVTIAVDDYRTVHAAKVLGVQNGEVVRAGIVGTGLTDEATVTWI-----PSG----------KIKKAEPTQNGGPP--GPLRLSLRNMIPASDGGAGPRCVSLILACPRPLALRRILPVVSMMGVDRLVLCGASKVPKDYFGSHLFRKEEEITKLLVEGLCQAGDVRLPEVTVARRLKIFLEDDLDDIFPPPERGGPTRVIAHPTRS--GISKEKGGKIEMRVRDVELYAPSPM---GSNDSSHHP---------SILLAVGPEGGWEEEYEIDLFRKHGFEVVTLGQRTLRTDVAVITLLGLA 369
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A448YWC9_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWC9_9STRA) HSP 1 Score: 187 bits (474), Expect = 8.540e-49 Identity = 136/358 (37.99%), Postives = 176/358 (49.16%), Query Frame = 3
Query: 390 GLVVRFLNRVMLEPYEVVEGEEG-----RLSVTLPAADSRTAHIRGVLKGESGEFLRVGVVNAGRM------------DDAEITWVEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLV-------IDLGPNQRQLLQ-PIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFLE-DELERHFPKDRWVRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQ-FLESFGFQAVTLGSRVLRSDVAVSALLALAHAWVEEREH 1382
G + LNR + P EV E R+ V LP D RT H L ++G+ +R G+V G D+A + W+ P P + + + +P + ID P + PI +V+L+LA+PRPLQ+ RILP+++ +GV LVL A KVPK YFGSH FR P+ ++ KLIEGL Q G+ LP++ V R L+ FL DE E FP+D RVLAHP R P+ LR +V P G P +LVAVGPEGGW EP EL F GFQ +TLGSR LRSDVAV+ LL+LAH EH
Sbjct: 49 GTTLCRLNRFLFGPTEVATTTEDTDAEERVVVVLPKDDYRTVHAAKTLGLKNGDLVRAGIVGGGSTGDAGSDGPGQWTDEATVEWI---------PEPPVKKAEVLKNGNPPGSLAITLNNLRSIDEDPGRSSAASDPI------RVSLLLALPRPLQIGRILPMISQIGVDHLVLTSAAKVPKDYFGSHLFRKPEVLQEKLIEGLCQAGDVRLPKLRVVRNLSGFLRSDEFEELFPRDSCARVLAHPKR-------------------------HDDPEEPLRMGEVRFPSGSPPR---ILVAVGPEGGWEEPGELDLFRNECGFQQITLGSRTLRSDVAVAGLLSLAHEACHANEH 363
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A6V2MGD3_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MGD3_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.410e-48 Identity = 140/359 (39.00%), Postives = 181/359 (50.42%), Query Frame = 3
Query: 405 FLNRVMLEPYEVVEG------------EEGRLS---VTLPAADSRTAHIRGVLKGESGEFLRVGVV---------------NAGRM-DDAEITW-----VEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFLEDELERHFPKDRWVRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAG-----VLVAVGPEGGWVEPNELQFLESFGFQAVTLGSRVLRSDVAVSALLALAH 1358
+LNR + +P EV EG EE + VTLP D RT H +L +G+ +R G+V N+G + D+A I W ++ +P PP +SP + D + QP V+L+LA+PRPLQL RILP+VA LGV LVL A+KVPK YFGSH FR P +R LIEGL Q G+ +P+V V RRL FLED+L+ FP D + RV+AHP R + G + IP P LR V PE + +++AVGPEGGW E EL + GFQ +TLG RVLRSDVAV +LL+LAH
Sbjct: 108 YLNRFLFDPCEV-EGLIKPNNNDDECNEENSSTAPYVTLPKNDYRTVHAAKILNVHNGDTIRAGIVGEDDLISNDDASSYQNSGLITDEAVIEWLPEGKIKKAEPTKNGDPPGSLRVLLHSLTSP-YTTPSDDTASSSSSYSQP--------VSLILALPRPLQLGRILPMVAQLGVDHLVLTSAQKVPKDYFGSHLFRKPNELRRHLIEGLCQAGDVKIPKVTVVRRLKPFLEDDLDSMFPLDEYARVIAHPQREKIVLENG----------------ETIIPAPPLRMRDVVFPESSNTEQEQHQQPRIVLAVGPEGGWAEDYELNMFQKCGFQQITLGKRVLRSDVAVVSLLSLAH 440
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A4D9D2J3_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2J3_9STRA) HSP 1 Score: 184 bits (468), Expect = 2.630e-48 Identity = 122/338 (36.09%), Postives = 177/338 (52.37%), Query Frame = 3
Query: 408 LNRVMLEPYEVV-----------EGEEGRLSVTLPAADSRTAHIRGVLKGESGEFLRVGVVNAGRMDDAEITWVEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFLEDELERHFPKD----------RWVRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQFLESFGFQAVTLGSRVLRSDVAVSALLALAH 1358
LNR++ E E+ EGEE + V L D+R H+R VL+ ++G+ +RVGV+N GR D A + W E +L + +GP+ LL P + RP+V ++LA+ PL++ERI+P + +LGV L++ AKKV K Y+GSH R+PQ++R ++EGLSQ G+T++P +++ RRL FL D+LE +P +RVL+HP R V + S +PK GL+ +L+A+GPE GW EP EL+ GFQ +TLG RVLR++ AV ALLALAH
Sbjct: 3 LNRLLFEAEEINLTLRNPQDGRGEGEESAI-VRLGQDDARAQHVRKVLRAKTGDEVRVGVLNGGRNDRAVVEWTE-------------------------GGELHLAMGPS-LPLLTPPSEALRPRVDVLLAMQAPLRMERIIPHMVALGVGRLLITSAKKVEKSYWGSHLLREPQALRELVVEGLSQAGDTIVPDIIIDRRLKRFLSDKLEVLYPSSPPPSASSSFQHTLRVLSHPFRA-------LHDSVGVDTRFRQLSWPFPVPKNGLKGETAV-------GQPRLLLAIGPESGWEEPYELELFREHGFQQITLGPRVLRTETAVPALLALAH 299
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A1E7F786_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F786_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.750e-47 Identity = 134/336 (39.88%), Postives = 177/336 (52.68%), Query Frame = 3
Query: 408 LNRVMLEPYEVVEGEEGRLSVT---LPAADSRTAHIRGVLKGESGEFLRVGVVNAGRMDDA-------EITWVEPVDPPP-------GAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFL-EDELERHFPKDRWVRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQFLES-FGFQAVTLGSRVLRSDVAVSALLALAH 1358
LNR + P EVV E S+ LP D RT H L ++G+ +R G+V DDA + W+ P+ P G PP + R + KS ID PI V+L+LA+PRPLQL RILP+++ +GV LVL AKKVPK YFGSH F+ P+ + KLIEGL Q G+ LPQ+ + R FL +E + FPK+ + RVL+HP R ++ ++E LR SQVE P+ + + ++VAVGPEGGW EP EL L++ GFQ +TLGSR LRSDVAV LL+LAH
Sbjct: 38 LNRFLFSPEEVVRSTEDSTSIVEIKLPKDDYRTIHAAKTLGLKNGDLIRAGLVGGSSGDDAGQWTDEATVEWI-PIPPVKKAEVLKNGNPPGFLSIRLNNLKS--------IDNDSQSSPATDPI------NVSLILALPRPLQLGRILPMISQIGVDHLVLTSAKKVPKEYFGSHLFKKPELLTEKLIEGLCQAGDVRLPQLHLVRNFRNFLLSEEFDNLFPKETYARVLSHPKR--------------------QSDLEEP-----LRMSQVEFPKT---SPSRIVVAVGPEGGWEEPYELDMLKNDCGFQQITLGSRTLRSDVAVCGLLSLAH 330
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Match: A0A1Z5JKH5_FISSO (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKH5_FISSO) HSP 1 Score: 180 bits (457), Expect = 3.350e-47 Identity = 125/327 (38.23%), Postives = 174/327 (53.21%), Query Frame = 3
Query: 399 VRFLNRVMLEPYEVVEGEEGRLS-VTLPAADSRTAHIRGVLKGESGEFLRVGVV-----NAGRMDDAEITWVEPVDPPPGAPPPDIPGRQKDRKSSPKWMDLVIDLGPNQRQLLQPIPQERRPKVALMLAVPRPLQLERILPIVASLGVTTLVLCQAKKVPKFYFGSHFFRDPQSIRTKLIEGLSQCGETVLPQVVVARRLTIFLEDELERHFPKDRWVRVLAHPTRLPPQIARGAEGKVPATAAGVEASIDETIPKPGLRFSQVEPPEGCDPADAGVLVAVGPEGGWVEPNELQ-FLESFGFQAVTLGSRVLRSDVAVSALLALAH 1358
V FLNR +L P EV + E+ L L D RT H +L +G+ +R G+V N D A + W+ P G + + P L I L Q L+ Q V+L+LA+PRPLQL R+LP+++ +GV LVL +A+KVPK YFGSH FR P+ + +LIEGL Q G+T LPQV V + L+ F++D L+ FP RV+AHP R+ V+ + E++ + F P +++AVGPEGGW EPNE++ F+ GFQ +T+G+RVLRSD AV +LL LAH
Sbjct: 15 VYFLNRFLLSPEEVSQDEDSSLPYAVLGKDDYRTIHAAKILNLRNGDSVRAGLVSSEDHNGFLTDHATVQWL-----PEGK----VKKAEVLNNGDPPG-SLHIRL-----QSLESSTQRFSHSVSLILALPRPLQLGRMLPMISQMGVDHLVLTEARKVPKDYFGSHLFRKPELLTERLIEGLCQSGDTKLPQVTVVKNLSQFMDDTLDELFPLHSHARVIAHPQRV------------------VKDRVIESVRMRSVTFPTDSPRR--------MVIAVGPEGGWEEPNEIERFVNQHGFQQITMGTRVLRSDCAVVSLLGLAH 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig88.105.1 >prot_P-littoralis_Contig88.105.1 ID=prot_P-littoralis_Contig88.105.1|Name=mRNA_P-littoralis_Contig88.105.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=421bp MRASSLVALPLRTAFARSSTPSRGGSGVLCAGFHVLSGHHSSHRYLRWSQback to top mRNA from alignment at P-littoralis_Contig88:535039..540934- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig88.105.1 ID=mRNA_P-littoralis_Contig88.105.1|Name=mRNA_P-littoralis_Contig88.105.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5896bp|location=Sequence derived from alignment at P-littoralis_Contig88:535039..540934- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig88:535039..540934- >mRNA_P-littoralis_Contig88.105.1 ID=mRNA_P-littoralis_Contig88.105.1|Name=mRNA_P-littoralis_Contig88.105.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1263bp|location=Sequence derived from alignment at P-littoralis_Contig88:535039..540934- (Pylaiella littoralis U1_48)back to top |