mRNA_P-littoralis_Contig88.96.7 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE) HSP 1 Score: 536 bits (1380), Expect = 7.550e-170 Identity = 282/333 (84.68%), Postives = 293/333 (87.99%), Query Frame = 1
Query: 1 AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEDSDDKKMENLYTGQGVGIEEDGDDDEDEVDGN-------VIKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTRSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEQFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNAVKLTYDQRKERVAAKKDEIRAARAAAEDE 978
AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNK+VLAQIIYATIQGD+CMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDE D+KKMENLYTGQGVG+EEDGDD VDGN V+KSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDT+ YD EDEAKYKE FASYIENE+TF+D+E+MYKETHKAIREDPSPAPK AFTPDKSFKNAVKLTY QRKERVAAKK+EIRAARAA EDE
Sbjct: 8 AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADDEKKMENLYTGQGVGVEEDGDDXXXXVDGNDGTDGLRVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKQYDVS--------------------EDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRKERVAAKKEEIRAARAA-EDE 319
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A6H5JE10_9PHAE (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE10_9PHAE) HSP 1 Score: 508 bits (1309), Expect = 4.120e-152 Identity = 422/982 (42.97%), Postives = 486/982 (49.49%), Query Frame = 3
Query: 4884 SPLFEFRRYAVRTSETYLIAAAAVXXXXSSSSCSNSDEGDCIDEDKGTRSFTALKGWDKPYVHVPQNKDDGVAEQRMAGXXXXXXXXXXRR-----------EEGVINTAAVEAIGVSIEEAEEAWSMLTAGLLHD----GS-------------GGAEGRGG-EYALSLDFFLRVVRALGRHLAPISVPSPLVSYCARLVQAHPETKARALPWLAPAIERAGPLAGADGGEVGAGXXEGRQGGVRQRVRRGXXXXXXXXXXXXXXXAEDSGVALAEAGGRRHGNEGQGQGEAGEAVMLGERGLCRLAQASVSAAAGTAASPFPPLSVVGLLPPHCSPQHSCAPNVQLEAYLLPAMVTPAQREKDGRPRLSHGSGGGEQMLLTNCGDAASVSTGRESSSALRVGLVTLRGVRAGGELFAPYVALSQSVEDRRRELASRFHVDRRAGSNAAXXXXXXAN----------------------------------SVFCSCPRCLVDDGGDHRSCGREMLKILADQALEEGRHAAALRLYRASLAASSPPSRPF----SSPCSPSPRPPHASFGDGRGSEFGADGDGGSRPSQQQGETEDDPCSIAAAGCEGGGRKRALRSGAGSSGXXXXXXXXXXXXXXX---------------------VAGDALHGVGVALLAVGKFREACRAWERGSHEAPHHAALRAQAEKDAAYRP---SGKDEGEKGLLLQQQLQGKEENAPTS------AASPTEGVHDAVEAAGCGNXXXXXXXXXXXXXXYTCDFFTSTPGSGVPDIFLSRAPVLSREECRGVIRAAEEYSKANGGWTTSRHYSVPTTDLPVHALRPVLPWFRSLVSKRLFPALAEHFGLAGGAEKVFVHDAFVVRYEEGKQRHLPLHRDQSTHSFTIALNGLDEYTGGGTFFPSLGRSLRPPEGHALSFRGGILHGGDPLLKGVRYIIACFCYYDSDDXXXXDTIDEAEGGE 7538
+PLFEF RYAVRTSETYLIAAAAV S+S +S EG D D G RSF AL+GW +PY+ P + D XXXXXXXXXX + G I AAV+ IGVS+EEAEEAWS+LTAGL+H GS GG GR E ALSLDFFLRV AP+ +L +P +A +Q+ X + + AG LG+R T S + VG + R + RPR + L SS+ LRVGLV LR V+AG ELFAPY+AL Q ++ R+REL+SRF R A + C+CPRCL++ GGDHR CGRE LK+LADQALEEGRH AAL LYRASLAA PP P +S C+P+P G + +GG T DP XXXXXXXXXXXXXXX + GDALHG+GVALLA G FREACRAWERG +AP+H ALRAQAEK+AAYRP +G + GE G G E +P +ASP +G++ + C FTS PG DIFLSR VLS EECRGVI+AAE+YS+ NGGWTTSRHY+VPTTDLPVH L+ LPWFRSLV KRLFPALA+ F LA G ++VFVHDAFVVRYEEGKQRHLPLHRDQSTHSFTIALNGLD+YTGGGTFFPSLGRSLRP EGHALSFRGGILHGGDPLLKGVRYIIACFCYYD D D EGGE
Sbjct: 7 NPLFEFHRYAVRTSETYLIAAAAVASVLSTSF--SSTEGLREDSDDGIRSFEALEGWAEPYM--PPLRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGTIGFAAVKDIGVSVEEAEEAWSLLTAGLVHGRGVLGSSHRAATATPTARDGGVGGRSSVERALSLDFFLRV--------APMGQT--------KLASTNPANQA-----------------------------------PQQKAAXXX--------------------------------QQSSENVAGRLTALGKR------------TKKTTQSSWAREGCVG-----------------------------SSRHRQRRPRA--------RRLADEKDGVHEAENQVSSSTVLRVGLVALRRVQAGEELFAPYIALGQPMQARQRELSSRFFAGRSTSGGLAAASATGXXXXXXXXTVAAEVADIAPTGSCSLPGLSSLQRQPPQLVCNCPRCLLEAGGDHRLCGRETLKVLADQALEEGRHEAALGLYRASLAA--PPPSPSLASKASSCTPAPVAAATRAPSGANNSGTTRREGGHL-------TACDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPAEQPEQEVAAAVLKGDALHGIGVALLAAGNFREACRAWERGFRDAPNHPALRAQAEKEAAYRPKAENGANAGECG--------GAEGPSPEKQGKRIISASPAQGLYGDTS----------------DDDTHLC--FTSVPGRAA-DIFLSRERVLSPEECRGVIQAAEDYSQGNGGWTTSRHYAVPTTDLPVHVLKSTLPWFRSLVRKRLFPALAKRFNLAAGPQRVFVHDAFVVRYEEGKQRHLPLHRDQSTHSFTIALNGLDQYTGGGTFFPSLGRSLRPAEGHALSFRGGILHGGDPLLKGVRYIIACFCYYD--DGGDSDEEVAREGGE 814
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: D8LR24_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR24_ECTSI) HSP 1 Score: 473 bits (1216), Expect = 4.230e-142 Identity = 299/576 (51.91%), Postives = 340/576 (59.03%), Query Frame = 3
Query: 5985 SSSALRVGLVTLRGVRAGGELFAPYVALSQSVEDRRRELASRFHVDRRAGSN-------------------AAXXXXXXANS---------------VFCSCPRCLVDDGGDHRSCGREMLKILADQALEEGRHAAALRLYRASLAASSPPSRPF----SSPCSPSPRPPHASFGDGRGSEFGADGDGGSRPSQQQGETEDDPCSIAAA---------------GCEGGGRKRALRSGAGSSGXXXXXXXXXXXXXXXVA-----GDALHGVGVALLAVGKFREACRAWERGSHEAPHHAALRAQAEKDAAYRPSGKDEGEKGLLLQQQLQGKEENAPTSAASPTEGVHDAVEAAGCGNXXXXXXXXXXXXXXYTCDFFTSTPGSGVPDIFLSRAPVLSREECRGVIRAAEEYSKANGGWTTSRHYSVPTTDLPVHALRPVLPWFRSLVSKRLFPALAEHFGLAGGAEKVFVHDAFVVRYEEGKQRHLPLHRDQSTHSFTIALNGLDEYTGGGTFFPSLGRSLRPPEGHALSFRGGILHGGDPLLKGVRYIIACFCYYDSDDXXXXDTIDEAEGGE 7538
SSSALRVGLV LR V+AG ELFAPY+AL Q ++ R+REL+SRF R A A S + C+CPRCL++ GGDHR CGRE+LK+LADQALEEGRH AAL LYRASLA PP +S C+P+ G + D +GG + D SIA G E G + A + S G A GDALHG+GVALLA GKFREACRAWERG +AP+H LRAQAEK+AAYRP + G+ + E+ ++P H G + + C F S PG DIFLSR VLS EECRGVI+AAE+YS+ANGGWTTSRHY+VPTTDLPVHAL+ LPWFRSLV +RLFPALA+ F LA G +VFVHDAFVVRYEEGKQRHLPLHRDQSTHSFTIALNGLD+YTGGGTFFPSLGRSLRP EGHALSFRGGILHGGDPLLKGVRYIIACFCYYD D D EGGE
Sbjct: 83 SSSALRVGLVALRRVQAGEELFAPYIALGQPMQARQRELSSRFFAGRSASGGXXXXXXXXXXXXXXXXXXXAEVPDTAPTGSCSLPGLSSLQRQPPQLVCNCPRCLLEAGGDHRLCGREILKVLADQALEEGRHEAALGLYRASLAV--PPXXXXXSSKASSCTPARFAADIQAPSGANNSCTTDREGGDLTAC------DASSSIAXXXXXXXXXXXXXXXEEGNETSGARTATVAEEESGGSEPAAVEPAEHPEQEAAAAVLNGDALHGIGVALLAAGKFREACRAWERGFRDAPNHPVLRAQAEKEAAYRPKAGEGANSGVCGGAEGPSPEKQGKRIISTP----HAEGLLGGSSDDDT-----------HLC--FASIPGRA-SDIFLSRERVLSPEECRGVIQAAEDYSQANGGWTTSRHYAVPTTDLPVHALKSTLPWFRSLVRERLFPALAKRFNLAAGPRRVFVHDAFVVRYEEGKQRHLPLHRDQSTHSFTIALNGLDQYTGGGTFFPSLGRSLRPAEGHALSFRGGILHGGDPLLKGVRYIIACFCYYD--DGGDSDEEVAREGGE 630
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A6H5J869_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J869_9PHAE) HSP 1 Score: 417 bits (1071), Expect = 4.180e-128 Identity = 222/322 (68.94%), Postives = 249/322 (77.33%), Query Frame = -1
Query: 3025 MGAAVSSPAEGDTAGGAGXXXXXXXXXXXXXXXXXXXXSGGPWDVNLGIPFSAVNGVRSLADGTACTCFRGELGGGGSGNDGGSRPVAIKTLKAEND-SKSDAEDLDRELSILQLLQHPNIVGLAGAGQMPEGRGLFIATELLSGRTLSAAIGTKDCPEGSSWLWRARVRSWFPMEEAFRQAAGVASALAYMHDDALPGAKILHRDIKSNNLAFTADFGTLKL-DFGLAKILRPGDLIGDNLYKMTGNTGSMRYMSPEVARNLPANETADVYSFAMVLWEMVSLHLPFQFYRVKEMMEQVVLGGVRPRLPPDWPEGFKDLLT 3984
MG A SSPA G +G AG GGPW+V+L IPF + +R LADGT CTC++G LG GND G++ VAIKTLKA N S SDA+DLDRELSILQ L+HPN+V LAGAGQ PEG G F+ATELLSG TLSAAIGT+D PEG+ W R RVR+WFPM+EA RQAAGVASALAY+HD+A+PGAK+LHRDIK NNLAFT DF TLKL DFGLAK+LRP D IGDNLY MTGNTGSMRYM+PEVARNLPANETADVYSFA+VLWEMVSL LPFQFY VK++ E+V GG RPRL PDWP GF DLLT
Sbjct: 1 MGTATSSPARG--SGQAGKQASTVDQQQQD--------DGGPWEVDLAIPFEEITDIRPLADGTGCTCWQGSLG----GNDEGNKRVAIKTLKASNSTSDSDAKDLDRELSILQHLRHPNVVRLAGAGQSPEG-GRFVATELLSGGTLSAAIGTQDRPEGTGWFQRFRVRTWFPMDEALRQAAGVASALAYLHDEAVPGAKVLHRDIKPNNLAFTGDFRTLKLFDFGLAKMLRPDDSIGDNLYTMTGNTGSMRYMAPEVARNLPANETADVYSFAIVLWEMVSLELPFQFYGVKQLSERVAFGGDRPRLAPDWPTGFTDLLT 307
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA) HSP 1 Score: 400 bits (1027), Expect = 1.210e-122 Identity = 206/313 (65.81%), Postives = 242/313 (77.32%), Query Frame = 1
Query: 4 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEDSDDKKMENLYTGQGVGIEEDGDDDEDEVDGNVIKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTRSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEQFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNAVKLTYDQRKERVAAKKD 942
F +VQK K+YF R+QVK+RRRREGKTDYR RK+L Q KNKY SPKYRLVVRFTN+ V+ QI YA I GD +CQASS EL RYG VGLKNYAAAYCTGLLVARRLL+++GLDE +Y G EVDG V+ +E N +TYYVDEVDE++RPF+ALLDVG R+T+TG R+FG +KGAADGGLDVPH+EKRFPGYDRD + YDAE+HR+RI+G HV EYMEYL EED KYK+QFASYIE EI D +EE+Y+ H+A+REDPS + K AFTPDKSFK KL+YD+RK RV AKKD
Sbjct: 3 FCRVQKNKSYFSRFQVKYRRRREGKTDYRQRKKLCTQAKNKYQSPKYRLVVRFTNRLVICQIAYAMIDGDRVLCQASSAELSRYGLSVGLKNYAAAYCTGLLVARRLLQKVGLDE---------VYEGN------------TEVDGEVVSTEVNKKTYYVDEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAADGGLDVPHSEKRFPGYDRDGKEYDAEMHRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERKARVQAKKD 294
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA) HSP 1 Score: 400 bits (1028), Expect = 1.360e-122 Identity = 207/309 (66.99%), Postives = 244/309 (78.96%), Query Frame = 1
Query: 4 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEDSDDKKMENLYTGQGVGIEEDGDDDEDEVDGNVIKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTRSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEQFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNAVKLTYDQRKERVA 930
FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N+YV QI YAT++GD +CQA+S EL RYG K GLKNYAAAYCTGLL ARRLL+QLGL E LY GQ +E +G V+K+E +TY+V+EVDE+KRPF+ALLDVGI +TSTG RVFG MKGAADGGLD+PH+EKRFPGYDRD++ +DAE+H D IYGAHV+EYMEYL EEDEA YKE FA+YIE + +++E+ E HKAIREDPS APKA F P+K +K A K TY++RK +VA
Sbjct: 3 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQLGLAE---------LYEGQ------------EEAEGTVVKTEMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFDAEVHHDHIYGAHVSEYMEYLMEEDEALYKEHFATYIELGLGPENMEDTLTEVHKAIREDPSAAPKADFKPNKKYKRAAKATYEERKAKVA 290
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS) HSP 1 Score: 395 bits (1016), Expect = 3.630e-121 Identity = 203/325 (62.46%), Postives = 247/325 (76.00%), Query Frame = 1
Query: 4 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEDSDDKKMENLYTGQGVGIEEDGDDDEDEVDGNVIKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTRSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEQFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNAVKLTYDQRKERVAAKKDEIRAARAAAEDE 978
FVKV K+KAY+KRYQVKFRRRREG+TDYR RKRL CQ KNKY SPKYR VVRF+NK V+ QI Y I GD + ASS ELPRYG KVGLKNYAA+YCTGLL ARRLL+++GLD+ +Y G DE+DGNV+K++ TYYVDEVDE+KRPF+ALLDVG ++T+TG R+FG +KGAADGGLD+PH+EKRFPGYDRD++ YDA++HR+RI+G HV EYMEYL EED KY+ QFA Y+ENE+ D +EE+Y+ H+ IREDPSP+ K AF+PDKSFK KLT ++RK V +KKD + A AEDE
Sbjct: 3 FVKVTKSKAYYKRYQVKFRRRREGRTDYRQRKRLCCQAKNKYQSPKYRFVVRFSNKQVICQIAYTLIDGDRILTSASSNELPRYGLKVGLKNYAASYCTGLLCARRLLQKVGLDD---------VYEGN------------DEIDGNVVKTQVGKSTYYVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERKAAVQSKKD-TKNAELEAEDE 305
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A1Z5J7J4_FISSO (Large subunit ribosomal protein L5e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J4_FISSO) HSP 1 Score: 394 bits (1013), Expect = 8.850e-121 Identity = 200/324 (61.73%), Postives = 248/324 (76.54%), Query Frame = 1
Query: 4 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEDSDDKKMENLYTGQGVGIEEDGDDDEDEVDGNVIKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTRSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEQFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNAVKLTYDQRKERVAAKKDEIRAARAAAED 975
FV+ KTKAYF RYQVKFRRRREGKTDYR RKRL+CQDKNKY SPKYRLVVRFTN+ V+ QI+Y+ I GD + QA+S EL RYG VGLKNYAAAYCTGLLVARR+L++LGLD+ +Y G EVDG ++ ++ + + YYVDEVD++K+PF+ LDVG R+TSTG R+FG +KGAADGGLD+PH+EKRFPGYDRDT+ YDA++HR+RI+G HV+EYMEYL EED AKY+ F S++EN+I D +EE+Y+ H+ IREDPSP+ K FTPDKS+K KLT+D+RK RV AKKD +A AA E+
Sbjct: 3 FVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDD---------VYEGN------------TEVDGQIVSTDYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKSYKRKSKLTHDERKARVQAKKDAKKAELAADEE 305
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA) HSP 1 Score: 390 bits (1003), Expect = 2.020e-119 Identity = 199/312 (63.78%), Postives = 240/312 (76.92%), Query Frame = 1
Query: 4 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEDSDDKKMENLYTGQGVGIEEDGDDDEDEVDGNVIKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTRSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEQFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNAVKLTYDQRKERVAAKK 939
F++ +TKAYF RYQVKFRRRREGKTDYRARKRL QDKNKY SPKYRLVVRFTN V+ QI YA + GD +CQA STEL RYG VGLKNYAAAYCTGLL ARRLL+++GLDE +Y G EVDG V+ +E + +TY+V+EVD++KRPF+ALLDVG + T+TG+R+FG +KGAADGGLDVPH+EKRFPGYDRD + YD+++HR+RI+G HV+EYMEYL EED KYKE FA YIE ++ D +EE+Y+ H+AIREDPSP+ K F+PDKSFK KLTYD+RK VAAKK
Sbjct: 3 FIQEGRTKAYFSRYQVKFRRRREGKTDYRARKRLCAQDKNKYQSPKYRLVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYAAAYCTGLLCARRLLQKVGLDE---------IYEGN------------TEVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEYDSDMHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERKAAVAAKK 293
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA) HSP 1 Score: 391 bits (1005), Expect = 2.440e-119 Identity = 201/314 (64.01%), Postives = 242/314 (77.07%), Query Frame = 1
Query: 4 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEDSDDKKMENLYTGQGVGIEEDGDDDEDEVDGNVIKSE-SNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTRSYDAELHRDRIYGAHVAEYMEYLTEEDEAKYKEQFASYIENEITFDDVEEMYKETHKAIREDPSPAPKAAFTPDKSFKNAVKLTYDQRKERVAAKKD 942
FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ QI YA I GD +CQASSTEL RYG VGLKNYAAAYCTGLL ARRLL+++GLD +Y G E+D V+K+E S+G+TY+V+EVD++KRPF+ALLDVG ++T+TG R+FG +KGAADGGLD+PH+EKRFPGYDRD + YDAE+H++RI+G HV EYMEYL EED KY+E F YI+ +I D +EE+Y+ H+ IREDPS A K A++PDK+FK KLT QRKERV AKKD
Sbjct: 21 FVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQKVGLD---------GVYEGN------------TEIDAEVVKTEHSDGKTYFVEEVDDDKRPFRALLDVGCKATTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDAKEYDAEMHKERIFGGHVGEYMEYLEEEDNTKYQEHFKGYIDEDIEADGLEELYEGVHEKIREDPSAAEKKAYSPDKTFKRKAKLTLAQRKERVQAKKD 313 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.96.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig88.96.7 >prot_P-littoralis_Contig88.96.7 ID=prot_P-littoralis_Contig88.96.7|Name=mRNA_P-littoralis_Contig88.96.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1200bp MSLVVPVVDGLIAEPRETAVKGWSVSTSKPLQKDTVIGGAVPLLVHQTLAback to top mRNA from alignment at P-littoralis_Contig88:405225..442715+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig88.96.7 ID=mRNA_P-littoralis_Contig88.96.7|Name=mRNA_P-littoralis_Contig88.96.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=37491bp|location=Sequence derived from alignment at P-littoralis_Contig88:405225..442715+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig88:405225..442715+ >mRNA_P-littoralis_Contig88.96.7 ID=mRNA_P-littoralis_Contig88.96.7|Name=mRNA_P-littoralis_Contig88.96.7|organism=Pylaiella littoralis U1_48|type=CDS|length=3600bp|location=Sequence derived from alignment at P-littoralis_Contig88:405225..442715+ (Pylaiella littoralis U1_48)back to top |