prot_P-littoralis_Contig88.88.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig88.88.3
Unique Nameprot_P-littoralis_Contig88.88.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length320
Homology
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: D8LPM7_ECTSI (RPA_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM7_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 4.320e-128
Identity = 196/267 (73.41%), Postives = 223/267 (83.52%), Query Frame = 0
Query:   63 QSLLAVNVKQVLESEMMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNN-----------NSMLNNQGGGDAKGFSTIQQRVHDMFVSADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRSTE 318
            QSLL+VN+KQVLESEM NQDSGAKIDG DV+QIKLVGCIVE+++ASTNTEYT+ED TGRLKVKMFHNDGEG NDR+AEKRA  Q+G YVRV GN+RSWKDDRHSVAY M PI DM+EVT HALE I THLFNTKGPLPGK+S  GGA VAQPMNGVGSPGF+GGSSQ GFTSPGNN           NS ++ +G   +KGF+ IQQ+VHD F+ ADEE GRSI +VA++L   GIS  DV++A+QFLSSEGHLYSTIDD+HYRSTE
Sbjct:   65 QSLLSVNIKQVLESEMANQDSGAKIDGADVSQIKLVGCIVEVDEASTNTEYTVEDTTGRLKVKMFHNDGEGANDRAAEKRARCQVGTYVRVFGNVRSWKDDRHSVAYTMTPITDMDEVTLHALETIYTHLFNTKGPLPGKASTFGGAGVAQPMNGVGSPGFNGGSSQHGFTSPGNNXXXXXXXXMYNNSNMDPEG---SKGFTPIQQKVHDQFLGADEEQGRSIAEVADSLTREGISRTDVSTAVQFLSSEGHLYSTIDDDHYRSTE 328          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A835YU42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU42_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.050e-56
Identity = 114/269 (42.38%), Postives = 170/269 (63.20%), Query Frame = 0
Query:   59 NKEKQSLLAVNVKQVLESEMMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPL---PGKSSVG-GGAAVAQPMN--GVGSPGF--HGGSSQQGFTSPGNNNSMLNNQGGG--DAKGFSTIQQRVHDMFVSADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRST 317
            ++EKQS++ + +KQVLES+  N D   K+DGV++  ++LVGCI+++ + STN  + IEDGTGR+  K+F    E  +    E+R+  + GVYV V+G ++ W+D  H  A+ ++P+ D N++T H LE I  HL NT GPL   PG ++ G GGAA AQPM     GSPGF   GG++QQG       N    N GGG  D+   + + Q++ D+F +    HG S+   A+ L+  GI ++D+  A+ +LSSEGH+Y+T+DD HY+ST
Sbjct:   31 SREKQSIMPLTIKQVLESQHDNPDDKPKVDGVEIVHVRLVGCIIDINEHSTNAVFKIEDGTGRIDAKVFIEQDE--SQLQTERRSRCREGVYVAVVGQIKRWQDKLHVHAFDIRPLEDTNQITQHFLEAIYAHLHNTLGPLRKAPGGAAGGIGGAAGAQPMAVANYGSPGFARQGGAAQQG-------NYGAFNGGGGEMDSNNLAPLHQKLLDIFQADTNPHGLSLDYCADVLKPQGIGYDDIRDAVVYLSSEGHIYTTVDDFHYKST 290          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A7S0HR69_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HR69_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 5.050e-40
Identity = 98/258 (37.98%), Postives = 145/258 (56.20%), Query Frame = 0
Query:   62 KQSLLAVNVKQVLESEMMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSA-EKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNNNSMLNNQGGGDAKGFSTIQQRVHDMFVS-ADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRST 317
            KQSL    +KQ+  +     D+G  +DG D+ Q+ +VG I   ++ +TN +YT++DGT  + VKM+    +   D +A EKRA  + G  VRVIG +R++   R  VA+ +QP+ D NE T+H +EV+ THL NTKG    + +   GA +A    GV + G  GG + QG             Q G  A G ++ Q  V   F S A+ + G +I D  NA+   G++   V +A++ L +EGHLYSTIDD HY++T
Sbjct:   88 KQSLAPCTIKQLKNAPASGGDNGFSVDGKDLHQVTIVGLITHADEQNTNLQYTVDDGTDSINVKMWI---DAATDEAAMEKRAQWREGAVVRVIGQMRAFNQVRSIVAFHIQPLTDFNEYTFHFIEVVHTHLRNTKGAAAEQGAPAAGAGMAGASMGV-AGGMAGGMAPQGGAG-------FAPQAGFAANGAASTQDTVMKYFTSYAETDIGCTISDCVNAMAPQGVTDAQVRTAVEALVNEGHLYSTIDDEHYKAT 334          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A7S2B4J1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4J1_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.300e-37
Identity = 96/243 (39.51%), Postives = 133/243 (54.73%), Query Frame = 0
Query:   82 DSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPL-PGKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNNNSM-----LNNQGGGDAKGFSTIQQRVHDMFVS-ADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRST 317
            DS  K+DG D+ Q+KLVG I+ +E+ ST   Y IEDGTG +  K++ + G+  ++  AEKRAL + G YVR +G LR ++ +     Y M+P+ D NE+T+H LE I  HL NTKG    G+              GVG           GF +P  N ++      + QG GD   FST+Q  V   F +    E G SI D   +L ++G     V   ++FLS+EGHLYSTIDD H++ST
Sbjct:   11 DSNYKVDGQDIHQLKLVGNILSIEEHSTYAVYKIEDGTGVVDCKLWIDAGD--SEADAEKRALCRQGSYVRAVGVLRDFQGNASVQLYDMRPVTDHNEITHHMLEAIYVHLQNTKGSKNAGQPXXXXXXXXXXXXXGVG-----------GFNAPAVNTNLNSAMASDGQGSGD---FSTVQTEVLAYFTNNGSGEEGASINDAVKSLCANGHHDQAVRETVEFLSNEGHLYSTIDDEHFKST 237          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A7S3AZ16_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ16_9EUKA)

HSP 1 Score: 139 bits (350), Expect = 3.050e-35
Identity = 98/264 (37.12%), Postives = 147/264 (55.68%), Query Frame = 0
Query:   59 NKEKQSLLAVNVKQVLES-EMMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPMNG--VGSPGFHGGSSQQGFTSPGNNNSMLNNQGGGDAKGFSTIQQRVHDMFVSADE--EHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRST 317
            N++KQSL+   +KQ+  +    N ++   IDG D+ QI +VG I   ++ +TN +Y+++DGT  + VKM+  D E  ++   E+RA  + GV VRVIG LR++ + +  VAY +QPI + NE T+H ++V+ THL  TKG  P    V  G     PMNG  +G P    G +Q     P          GG  A     +   V   F +  E  + G +I DV  A+ +  IS   V  A++FL++EGHLYSTIDD+H+++T
Sbjct:   67 NRDKQSLIPATIKQLKNAVPASNGEASFMIDGADLHQITIVGLITSADEQATNLQYSVDDGTDHIMVKMWI-DAE-ADESFQERRAQWKEGVVVRVIGQLRAFNNSKSVVAYSIQPITNFNEYTFHFIDVVHTHLKATKGK-PVGVGVPRGIMGGFPMNGGGMGGPAMQQGMAQAAPNVP---------TGGAPAD----VNNLVLSFFKTKGEASDMGCTIGDVVGAVSAQNISEQRVREAVEFLTNEGHLYSTIDDDHFKAT 314          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A2B4RUP6_STYPI (Replication protein A 32 kDa subunit n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RUP6_STYPI)

HSP 1 Score: 132 bits (333), Expect = 6.010e-33
Identity = 86/260 (33.08%), Postives = 146/260 (56.15%), Query Frame = 0
Query:   63 QSLLAVNVKQVLESEMMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGR-LKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHS-VAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPM-NGVGSPGFHGGSSQQGFTSPGNNNSMLNNQGGGDAKGFSTIQQRVHDMFVSADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRSTES 319
            QS+L  ++KQ+  +     +   KI   ++ Q+ +VG I + ++++TN  YTI D TG  + V+ +  + E  +D   +KR+  +   YVRVIG+L+S++++  S +AY + P+ D NE+TYH +EVI +HL  +K     +S +    ++  PM +     GF G       T+PG  N       GG   G S IQ  +H M  S   E G S+ ++   ++   +S   + + +++LS+EGH+YSTIDD+H++ST+S
Sbjct:   54 QSILPCSIKQLHSATYNQTEDTFKIGNTELNQVSVVGVIRDAQESATNIMYTINDMTGEDIIVRRWLENEE--SDAEKDKRSSCRENTYVRVIGHLKSFRENSRSLIAYSLNPVTDFNEITYHMIEVIHSHLALSK-----QSEM---TSMTTPMKHSTPGRGFQGQ-----MTTPGKMNQGFGGNVGGTIAGLSGIQNEIHSMITSCQHEEGMSLTEIKQKVR---LSEQQIRTTLEWLSNEGHIYSTIDDDHFKSTDS 295          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A7S2SSA9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 9.420e-33
Identity = 83/262 (31.68%), Postives = 148/262 (56.49%), Query Frame = 0
Query:   59 NKEKQSLLAVNVKQVLESEMMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNN-NSMLNNQGGGDAKGFSTIQQRVHDMFVSADEEHGRSI--MDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRST 317
            ++++Q+++   ++Q+  + + + D   KIDGV++AQ++LV  ++++ + ST   Y +ED TG ++VKM+++  E  N+ +A +RA  + GVYVR+   L+ +       A  ++P+ D NE+T H LE I  HL +T+GP    ++  G  + +   +G G+ GF+          PGNN +S +  +G     GF+ +Q +  +     D   G  +    +   L +SG     V +A++FL+SEGHLYST+D+ HY+ T
Sbjct:   51 SRDRQTVIPFTIRQIKGATIGHADDPVKIDGVELAQVRLVANVMQVTEQSTYVVYDVEDCTGMIQVKMWNDQDE--NEMTATRRAACRQGVYVRIHAYLKVFNGQISVTAVDIRPVEDQNEITCHMLEAIYIHLQHTQGPKQAPATAAGWNSTS---SGFGTGGFN--------PPPGNNLSSTMALEGVSGNSGFTPVQAKALEAVNQIDSMDGPGVHVQAIVQQLGTSGFDAGAVRAAVEFLASEGHLYSTVDEEHYKVT 299          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A8B8CP90_CRAVI (replication protein A 32 kDa subunit-like n=3 Tax=Crassostrea TaxID=6564 RepID=A0A8B8CP90_CRAVI)

HSP 1 Score: 129 bits (324), Expect = 5.990e-32
Identity = 90/234 (38.46%), Postives = 129/234 (55.13%), Query Frame = 0
Query:   90 VDVAQIKLVGCIVEMEDASTNTEYTIEDGTGR-LKVKMFHNDGEGGNDRSA---EKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNNNSMLNNQGGGDAKGFSTIQQRVHDMFVSADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRSTES 319
            ++++QI +VG IV ++++ T  +Y ++D TG  L+VK F +     ND S    E+ A  +   YVRV G +RS+   R+  A+ M P+ DMNEVTYH LEV  +HL  +K    G SS         PMN                T+ G+N  + NNQ  G   G + IQ +VH +  S   E G SI +V   L+  G+    V  AI+FLSSEGH+YSTID++HY++T+S
Sbjct:   63 IELSQITIVGLIVAVKESPTRIDYEVDDMTGPPLEVKQFVD-----NDESVPEPERIAALRENTYVRVYGTVRSFGGKRNVTAFKMVPVMDMNEVTYHMLEVTHSHLALSKHMASGLSS-------GAPMN---------------STAMGDN--IYNNQDSGMISGLNQIQNQVHTLIQSNVTEEGASIENVCKQLR--GVPERSVREAIEFLSSEGHIYSTIDEDHYKATDS 265          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A7S0DLE7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLE7_9EUKA)

HSP 1 Score: 129 bits (324), Expect = 6.920e-32
Identity = 87/273 (31.87%), Postives = 135/273 (49.45%), Query Frame = 0
Query:   57 QRNKEKQSLLAVNVKQVLESEMMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNNNSMLNNQGGG---------DAKGFSTIQQRVHDMF--VSADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRSTE 318
            Q+    QS+  +  KQ  E++ ++  S   IDG  +AQ+++VG I+ ++  ST + Y I+DG+G+L VKM+ ND     D+   +       +YVRV+G +R     R  VA+ +QP+  MNE+T H L+VI THL NTKGPL  K +    A                            NN++ N  G             +G   +QQ V   F  + + +E G S+ +V   L+        +  A+ FLS+EGHLYST+D+ H++ T+
Sbjct:   35 QQKGRNQSMTPITCKQAREAKAID-GSSFTIDGQTIAQVRVVGLILNVDHESTQSSYGIDDGSGQLTVKMYRNDDAEDLDQHCRED------IYVRVVGTMRELAGQRIVVAFQIQPLKSMNEITLHNLDVIHTHLRNTKGPLESKKNRKAAA----------------------------NNNLYNEHGDSMYKKSSSEAQVEGMDNVQQEVLQAFKSIGSAKEQGASVNEVIQRLRK--FDPVKIREAVDFLSNEGHLYSTLDETHFKCTD 270          
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Match: A0A7S0J2L8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J2L8_9EUKA)

HSP 1 Score: 128 bits (322), Expect = 3.480e-31
Identity = 89/260 (34.23%), Postives = 137/260 (52.69%), Query Frame = 0
Query:   58 RNKEKQSLLAVNVKQVLESE-MMNQDSGAKIDGVDVAQIKLVGCIVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVYVRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLPGKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNNNSMLNNQGGGDAKGFSTIQQRVHDMFVSADEEHGRSIMDVANALQSSGISHNDVTSAIQFLSSEGHLYSTIDDNHYRS 316
            RNK++QSL+ V +KQ+  ++     D    IDG D+ Q+ +VG I+  E+A+TN +YTI+DGTG + VK + +    G     E+RA+ + G  VRV+G LR++   R  VA+ +QPI D NE T+H +E + +HL +T+G  P     GG  A A  M GV               + G             A    T+ Q   +   S   + G ++ D   A+++SG +   +   +  L+ EGHLYSTIDD+H++S
Sbjct:   74 RNKDRQSLIPVTIKQLKNAQGSAAGDQSFTIDGQDLHQVTIVGVIMRAEEANTNLQYTIDDGTGDMDVKKWIDSEADG--AMVEQRAMCREGKIVRVVGQLRTFNHTRSVVAFNIQPITDFNEYTFHFIECVHSHLRHTRGKPP----AGGAGANAPMMGGVAG------------VAAGQQXXXXXXXXXXAAALVDTVLQYFRNYGTS---DLGCTVADCYEAMKASGTTMPQLREVVDNLAQEGHLYSTIDDDHFKS 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.88.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM7_ECTSI4.320e-12873.41RPA_C domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YU42_9STRA1.050e-5642.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0HR69_9EUKA5.050e-4037.98Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
A0A7S2B4J1_9STRA8.300e-3739.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3AZ16_9EUKA3.050e-3537.12Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A2B4RUP6_STYPI6.010e-3333.08Replication protein A 32 kDa subunit n=2 Tax=Pocil... [more]
A0A7S2SSA9_9STRA9.420e-3331.68Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A8B8CP90_CRAVI5.990e-3238.46replication protein A 32 kDa subunit-like n=3 Tax=... [more]
A0A7S0DLE7_9EUKA6.920e-3231.87Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S0J2L8_9EUKA3.480e-3134.23Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 246..319
e-value: 2.6E-20
score: 73.9
IPR014892Replication protein A, C-terminalPFAMPF08784RPA_Ccoord: 191..312
e-value: 1.3E-14
score: 54.7
IPR014646Replication factor A protein 2PIRSFPIRSF036949RPA32coord: 26..318
e-value: 3.4E-59
score: 198.1
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 57..196
e-value: 5.8E-36
score: 124.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 66..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..62
NoneNo IPR availablePANTHERPTHR13989:SF16REPLICATION PROTEIN A2coord: 25..318
NoneNo IPR availableCDDcd04478RPA2_DBD_Dcoord: 94..192
e-value: 1.31613E-28
score: 104.218
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 25..318
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 251..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig88contigP-littoralis_Contig88:363683..370344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig88.88.3mRNA_P-littoralis_Contig88.88.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig88 362946..370699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig88.88.3 ID=prot_P-littoralis_Contig88.88.3|Name=mRNA_P-littoralis_Contig88.88.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=320bp
MSYGGFEYGGGGGGGGFGGGGMNDGGGGGFGSPSGGGFMAGGAVDSPAGG
GGSGGGQRNKEKQSLLAVNVKQVLESEMMNQDSGAKIDGVDVAQIKLVGC
IVEMEDASTNTEYTIEDGTGRLKVKMFHNDGEGGNDRSAEKRALNQIGVY
VRVIGNLRSWKDDRHSVAYMMQPIADMNEVTYHALEVITTHLFNTKGPLP
GKSSVGGGAAVAQPMNGVGSPGFHGGSSQQGFTSPGNNNSMLNNQGGGDA
KGFSTIQQRVHDMFVSADEEHGRSIMDVANALQSSGISHNDVTSAIQFLS
SEGHLYSTIDDNHYRSTES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR014892RPA_C
IPR014646Rfa2/RPA32
IPR012340NA-bd_OB-fold
IPR040260RFA2-like
IPR036390WH_DNA-bd_sf