prot_P-littoralis_Contig879.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig879.6.1
Unique Nameprot_P-littoralis_Contig879.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length330
Homology
BLAST of mRNA_P-littoralis_Contig879.6.1 vs. uniprot
Match: D8LDB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB3_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 1.660e-146
Identity = 210/331 (63.44%), Postives = 253/331 (76.44%), Query Frame = 0
Query:    2 LRSLAILATTVCTGA-SSFSNIKISQFEQLGLDLTFLLSWDT----TESLSSVSDLIDIWLETRQSDPSSFVQTLLEQGVENTGSLWIDAGDSWAARSSWDTTLSGEAIVCIYNSTDIYDNACGEALGILPEAEAPYATAGEGISNVYVPRVAQNGSSLEFSVTWADGGGSGGLEDTAPLVDIWLTAQQVSPPARVELALQLNAQNERMSHLEVDMDWSMMGWDLNRDGQLQSCVYDPRDYENYACSDFVAFTASVGVDGSSGDSNARGDSVSGGTXXXXXXXXXXXVGVVGWLAVTTSRRRQRKRWVGTPNEAEALPEEIFVRPLDAYAG 327
            +R +A++A      A +SFSN+KISQF+Q GLDL+FL+SWDT    +E+ SS S LIDIWLETRQ++ SS V+T+L+QGVENTGS+W+DAGDSWA RSSWD T+SGE IVC+Y+S D++DNAC E LGILPEAEAP AT G+GISNV VPRV QNGS L FSVTW DGGG+GG EDTAP VDIWL A+Q  PPA VEL ++ N +N+ +SH EV MDWSMMGWDL RDGQLQSCVYD +DY+NYACSDFV+F A          +N  GD   GGT           +G+V WLA+T+SRRRQR+RW+GT NEAEALPE+ FVR  D Y+G
Sbjct:   24 IRGVAVVALAKAASADASFSNVKISQFQQAGLDLSFLVSWDTANTTSENPSSGSGLIDIWLETRQTEASSMVETVLQQGVENTGSMWMDAGDSWAIRSSWDGTISGEGIVCVYHSDDLFDNACSEGLGILPEAEAPSATQGDGISNVDVPRVEQNGSYLSFSVTWGDGGGAGGFEDTAPFVDIWLVAEQSDPPAWVELVVEQNVENDMLSHQEVSMDWSMMGWDLTRDGQLQSCVYDTQDYDNYACSDFVSFAAMEETAADVDATNGGGDGGEGGTVLALVLAGGLVLGLVAWLAITSSRRRQRRRWLGTANEAEALPEDTFVRLSDPYSG 354          
BLAST of mRNA_P-littoralis_Contig879.6.1 vs. uniprot
Match: A0A6H5KP04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP04_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.520e-41
Identity = 70/123 (56.91%), Postives = 86/123 (69.92%), Query Frame = 0
Query:  205 MSHLEVDMDWSMMGWDLNRDGQLQSCVYDPRDYENYACSDFVAFTASVGVDGSSGDSNARGDSVSGGTXXXXXXXXXXXVGVVGWLAVTTSRRRQRKRWVGTPNEAEALPEEIFVRPLDAYAG 327
            +SH EV MDWSMMGWDL RDGQLQSCVYD +DY+NYACSDFV+F A+         +N+ GD   GGT            G+V WLA+T+SRR+QR+RW+GT NEAEALPE+ F+R    Y+G
Sbjct:    2 LSHQEVSMDWSMMGWDLTRDGQLQSCVYDTQDYDNYACSDFVSFAATEETAADGDATNSGGDGGEGGTVLALVLVGGLFSGLVAWLAITSSRRKQRRRWLGTANEAEALPEDTFIRLSGPYSG 124          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig879.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDB3_ECTSI1.660e-14663.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KP04_9PHAE1.520e-4156.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig879contigP-littoralis_Contig879:42644..47339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig879.6.1mRNA_P-littoralis_Contig879.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig879 42644..47339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig879.6.1 ID=prot_P-littoralis_Contig879.6.1|Name=mRNA_P-littoralis_Contig879.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=330bp
MLRSLAILATTVCTGASSFSNIKISQFEQLGLDLTFLLSWDTTESLSSVS
DLIDIWLETRQSDPSSFVQTLLEQGVENTGSLWIDAGDSWAARSSWDTTL
SGEAIVCIYNSTDIYDNACGEALGILPEAEAPYATAGEGISNVYVPRVAQ
NGSSLEFSVTWADGGGSGGLEDTAPLVDIWLTAQQVSPPARVELALQLNA
QNERMSHLEVDMDWSMMGWDLNRDGQLQSCVYDPRDYENYACSDFVAFTA
SVGVDGSSGDSNARGDSVSGGTVLGLVILGAMVVGVVGWLAVTTSRRRQR
KRWVGTPNEAEALPEEIFVRPLDAYAGLL*
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