prot_P-littoralis_Contig878.21.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig878.21.6
Unique Nameprot_P-littoralis_Contig878.21.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length485
Homology
BLAST of mRNA_P-littoralis_Contig878.21.6 vs. uniprot
Match: D7FVA4_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA4_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 2.420e-137
Identity = 258/491 (52.55%), Postives = 314/491 (63.95%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLASRQVMAVISCPDLITAVGVAATEITIDLEAGFSCETQIEIPASKEVTINGTSSTITIGAGFS-STSADAE-SVFVNEGTLTLNDVTFDTLAPSGIRGVYNTGTLTVTGCSFSLLSESEGGMLTNGGAIYSDSDAEVNIQDSTFESNVVSDKGGAICAVGSETLTVTDCIFRNNEVGTGEAAEGAGGDIYADRNVALTVHGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFG-ALLVGRRDATACTKELSLTEVNFAGCTVGYEDGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLDMDNVEFNYNSLPAETYASAAGSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCYFNEPYECEFVFDGVDITDEGDFKCNVCDIDGVKTIIGDDD----AASRASDGDTDXXXXXNQGIVIGLSLALGLTLVVIGGLAVWKVKVRKNARRLMEDMGDGDL 484
            M F+ K+A L L   GLA+RQ  AV +C  LITAV   +   T++LE GF+CE  I + AS++VTI+G + TIT+GA F+ ST+ DA  S+F NEGTL L+ +TF T    G                  L     G  L+ GG IYSDS   ++I DSTF+SN+ S+                      NEVGTG AA+GAGGD+YA  NV LTV GT FS S AE+GGAAIECCGA I+++ F+G D+         ALLV R D   C +EL L+   F+GCTVG   G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L MD V+FN N+ PAE YA+    QGAAIV+ N+ V ADG   V MGEF   YC+ NEPYECEFV+D  DI   G+FKC +CDI+G +   G DD    A+ R+ DGD+      NQGIVIGLSLALGLTLVVIG LAVWK +VRKNARRLMEDMG+GDL
Sbjct:    1 MGFTRKSAVLALFFLGLAARQASAVTTCLALITAVEAISGTGTVELEGGFTCEAYITVAASQDVTISG-AYTITLGAPFAGSTNTDAGGSLFENEGTLKLDGITFATETTDGXXXXXXXXXXXXXXXXXELYPT--GIFLSRGGVIYSDSAGTISISDSTFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVAADGAGGDVYAGTNVDLTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTXXXXXXXXXALLVNRPDQDGCPRELDLSNSTFSGCTVGSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTFPAEAYATDT-EQGAAIVVTNTGV-ADGETTVTMGEFNDMYCFANEPYECEFVYDQSDIVHSGEFKCQICDIEGERQQSGTDDDLIDASERSIDGDSSSD---NQGIVIGLSLALGLTLVVIGALAVWKFRVRKNARRLMEDMGEGDL 483          
BLAST of mRNA_P-littoralis_Contig878.21.6 vs. uniprot
Match: D7FV99_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV99_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 1.760e-106
Identity = 218/476 (45.80%), Postives = 274/476 (57.56%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLASRQVMAVISCPDLITAVGVAATEITIDLEAGFSCETQIEIPASKEVTINGTSSTITIGAGFS-STSADAE-SVFVNEGTLTLNDVTFDTLAPSGIRGVYNTGTLTVTGCSFSLLSESEGGMLTNGGAIYSDSDAEVNIQDSTFESNVVSDKGGAICAVGSETLTVTDCIFRNNEVGTGEAAEGAGGDIYADRNVALTVHGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFG-ALLVGRRDATACTKELSLTEVNFAGCTVGYEDGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLDMDNVEFNYNSLPAETYASAAGSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCYFNEPYECEFVFDGVDITDEGDFKCNVCDIDGVKTIIGDD-DAASRASDGDTDXXXXXNQGIVIGLSLALGLTLVVIGGLAVWKVKVRKNA 472
            M  S K+A L L   GLA+RQ  AV +CP LITAV   +   T +LE  F+C+T I + AS++VTI+G + TIT+G  F+ ST  DA  S+F+NEGTL L+ +TF T                       L     G  L+ GG +YSDS   ++I DSTF SN+ S+                    R NEVGTG  A+GAGGD+Y   NV LTV GT FS S AE+GGAAIECCGA I+N TF              ALLV R D   C ++L L++  F+GCTV    G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L M+ V+FN N+LPAE Y +    QGAAIV+ N+ V ADG   V MGEF   YC+ NEPYECEFV+D  DI   G+FKC +CDIDGV+ + G D D         +         I+IGLS AL L +++  G  V +   +  A
Sbjct:    1 MELSRKSAGLALFFLGLAARQASAVTTCPALITAVEAISGTGTAELEGSFTCDTHITVAASQDVTISG-AYTITLGPLFAGSTDTDAGGSLFMNEGTLKLDGITFATXXXXXXXXXXXXXXXXXXXXXXELYPT--GAFLSRGGVVYSDSAGTISISDSTFTSNLASEXXXXXXXXXXXXXXXXXXXXRGNEVGTGVDADGAGGDVYVGTNVELTVTGTTFSTSVAEYGGAAIECCGAVISNCTFXXXXXXXXXXXXXXALLVNRPDQDPCPRDLDLSDSTFSGCTVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMNYVQFNLNTLPAEAYVTDT-EQGAAIVVTNTGV-ADGETTVTMGEFDDIYCFANEPYECEFVYDQSDIVHNGEFKCQICDIDGVQQVSGTDGDLTGSIDQSSSSNSWDSKDYIIIGLSAALALCIILAIGFLVARAYKKHRA 471          
BLAST of mRNA_P-littoralis_Contig878.21.6 vs. uniprot
Match: D7FVA0_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA0_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 2.530e-97
Identity = 193/403 (47.89%), Postives = 245/403 (60.79%), Query Frame = 0
Query:   43 TIDLEAGFSCETQIEIPASKEVTINGTSSTITIGAGFS-STSADAE-SVFVNEGTLTLNDVTFDTLAPSGIRGVYNTGTLTVTGCSFSLLSESEGGMLTNGGAIYSDSDAEVNIQDSTFESNVVSDKGGAICAVGSETLTVTDCIFRNNEVGTGEAAEGAGGDIYADRNVALTVHGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFGA-LLVGRRDATACTKELSLTEVNFAGCTVGYEDGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLDMDNVEFNYNSLPAETYASAAGSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCYFNEPYECEFVFDGVDITDEGDFKCNVCDIDGVKTIIGDDDAASRASDGDTDXXXXXNQG 442
            T++LE+GF+C+  I + AS++VTI+G + TIT+GA F+ ST+ DA  S+FVNEGTL L+ +TF T A  G R V+N            L     G  L  GG IYSDSD E+ I  STF+SN+ S++GGA+ A+GSETLT+TD +F  NEVGTG    GAGGD+YA  NV LTV GT FS S AE+                                LLV R D  AC++EL L++  F+GC+V    G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L MD V+FN N+LPAE YA+    QGAAIV+ N+ V  +G   V MGEF   YC+ N+PYECEFV+D  DI   G+F C +C IDGV+  +   D  S    G T       +G
Sbjct:    6 TVELESGFTCDAHITVDASQDVTISG-AYTITLGALFAGSTATDAGGSLFVNEGTLELDGITFATEATDGNRAVWNGXXXXXXXXXXELFPSGGGEFLARGGVIYSDSDGEIAISASTFKSNIASERGGAVYAIGSETLTITDSLFTVNEVGTGVEEGGAGGDVYAGINVELTVTGTTFSTSAAEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVNRPDQDACSRELDLSDTIFSGCSVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTLPAEAYATDT-EQGAAIVVTNTGVE-EGNTTVVMGEFNDMYCFGNDPYECEFVYDQSDIVHSGEFNCQLCVIDGVRQEVSGTDDDSVEGIGQTSSSTSVQEG 405          
BLAST of mRNA_P-littoralis_Contig878.21.6 vs. uniprot
Match: A0A6H5L8Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q9_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 4.530e-57
Identity = 124/251 (49.40%), Postives = 160/251 (63.75%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLASRQVMAVISCPDLITAVGVAATEITIDLEAGFSCETQIEIPASKEVTINGTSSTITIGAGFSSTSADAESVFVNEGTLTLNDVTFDTLAPSGIRGVYNTGTLTVTGCSFSLLSESEGGMLTNGGAIYSDSDAEVNIQDSTFESNVVSDKGGAICAVGSETLTVTDCIFRNNEVGTGEAAEGAGGDIYADRNVALTVHGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSD 251
            M F+ KTA L LL  GLA+RQ  AV SC DLITAV   +   TI+LE GF+C+T I + A ++VTI+G + TITIGAGF+ ++ +  S+FVNEG L L+ +TF T   +G R V+N G L+V GC+F L     G  L  GG IYSDS   + I +S F+SN+ S+                      NEVGTG  A+GAGGD+YA  NV LTV GT FS S AE+GGAAIECCGA I+++ F+G D++SD
Sbjct:    1 MGFTSKTAGLALLFLGLAARQASAVTSCLDLITAVEAISDTGTIELEGGFNCDTFITVTAGQDVTISG-AYTITIGAGFAGSTDEDGSLFVNEGILKLDGITFVTETTNGNRAVWNAGELSVEGCTFELYPT--GAFLARGGVIYSDSAEAIAISNSIFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTASD 248          
BLAST of mRNA_P-littoralis_Contig878.21.6 vs. uniprot
Match: A0A6H5L0R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R7_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 6.610e-34
Identity = 67/108 (62.04%), Postives = 86/108 (79.63%), Query Frame = 0
Query:  144 IYSDSDAEVNIQDSTFESNVVSDKGGAICAVGSETLTVTDCIFRNNEVGTGEAAEGAGGDIYADRNVALTVHGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSD 251
            IYSDS   + I +S F+SN+ S++GGA+ A+GSETLT+TD +FR NEVGTG  A+GAGGD+YA  NV LTV GT FS S AE+GGAAIECCGA I+++ F+G D++SD
Sbjct:   14 IYSDSAGIITISNSIFKSNLASERGGAVYAIGSETLTITDSLFRGNEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTASD 121          
BLAST of mRNA_P-littoralis_Contig878.21.6 vs. uniprot
Match: A0A6H5K6C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C2_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 5.630e-25
Identity = 71/145 (48.97%), Postives = 93/145 (64.14%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLASRQVMAVISCPDLITAVGVAATEITIDLEAGFSCETQIEIPASKEVTINGTSSTITIGAGFSSTSADAESVFVNEGTLTLNDVTFDTLAPSGIRGVYNTGTLTVTGCSFSLLSESEGGMLTNGGAIY 145
            MV + K+A L LL  GLA+RQ  AV SC DLITAV       TI+LE GF+C+  I + A ++VTI+G + TITIGAGF+ ++    S+FVNEG L L+ +TF T    G R V+N GTL+V GC+F L     G  L+ GG I+
Sbjct:    1 MVLTRKSAGLALLFLGLAARQASAVTSCLDLITAVDAIFDTGTIELEGGFTCDIFITVTAGQDVTISG-AYTITIGAGFAGSTGADGSLFVNEGGLKLDGITFATETTDGNRAVWNVGTLSVEGCTFELYPT--GAFLSRGGVIF 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig878.21.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FVA4_ECTSI2.420e-13752.55Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7FV99_ECTSI1.760e-10645.80Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FVA0_ECTSI2.530e-9747.89Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5L8Q9_9PHAE4.530e-5749.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0R7_9PHAE6.610e-3462.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6C2_9PHAE5.630e-2548.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 29..360

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig878contigP-littoralis_Contig878:87645..101578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig878.21.6mRNA_P-littoralis_Contig878.21.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig878 86175..101818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig878.21.6 ID=prot_P-littoralis_Contig878.21.6|Name=mRNA_P-littoralis_Contig878.21.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=485bp
MVFSLKTAALGLLSFGLASRQVMAVISCPDLITAVGVAATEITIDLEAGF
SCETQIEIPASKEVTINGTSSTITIGAGFSSTSADAESVFVNEGTLTLND
VTFDTLAPSGIRGVYNTGTLTVTGCSFSLLSESEGGMLTNGGAIYSDSDA
EVNIQDSTFESNVVSDKGGAICAVGSETLTVTDCIFRNNEVGTGEAAEGA
GGDIYADRNVALTVHGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSS
DLEHFGALLVGRRDATACTKELSLTEVNFAGCTVGYEDGMGGSLAIFDTS
ATLLDCKFEESVGTAVFFESSSAAGEHRLDMDNVEFNYNSLPAETYASAA
GSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCYFNEPYECEFVFDGVDIT
DEGDFKCNVCDIDGVKTIIGDDDAASRASDGDTDSSSSDNQGIVIGLSLA
LGLTLVVIGGLAVWKVKVRKNARRLMEDMGDGDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence