prot_P-littoralis_Contig878.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig878.19.1
Unique Nameprot_P-littoralis_Contig878.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length113
Homology
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: D7FVA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA2_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 8.900e-51
Identity = 74/112 (66.07%), Postives = 94/112 (83.93%), Query Frame = 0
Query:    1 METFQTPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLFSRAQE 112
            M  FQTPRVNGAVL QF+G TVC+VGK++S++EG  E+Q+ETSDG K+T++M AGS+WTSQYVEV+GH+HE  +++EFKSTDFGD FD+  Y +AV LMTGK+SYLF   QE
Sbjct:    1 MAEFQTPRVNGAVLSQFLGNTVCVVGKVLSYQEGDSEAQLETSDGAKITVQMTAGSTWTSQYVEVIGHLHEPDRLQEFKSTDFGDMFDLRKYDEAVSLMTGKFSYLFYNPQE 112          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: A0A7S2UTE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTE4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.710e-25
Identity = 44/102 (43.14%), Postives = 72/102 (70.59%), Query Frame = 0
Query:    6 TPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLF 107
            TPR+NG++ + FVG+ VC+VGK++  +E +  + I++SDG  + + MA GSS+ + +VE+VG V     ++EFKS D+G++FD+ +Y + +QL  GKY  LF
Sbjct:   11 TPRINGSLRQNFVGRPVCLVGKVLDVQENSGSAVIQSSDGSSVQVVMAPGSSYLTSFVEIVGEVLPDLSIKEFKSIDYGENFDLDLYNQVLQLANGKYQKLF 112          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: A0A024UW39_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UW39_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.860e-23
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0
Query:    2 ETFQTPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLF 107
            E    PRVN A+L QFVG TV +VG I S      ++ ++TSD   +T+    G+ ++S+YVEV+G V   G ++EFK T FGD FD+  Y K VQL+ GKYS LF
Sbjct:    3 ENAPAPRVNKAILAQFVGHTVSLVGSIESWT--GSQAVLKTSDNGFVTVHPQPGADYSSKYVEVIGSVQPDGSLKEFKCTSFGDDFDLKNYDKLVQLIHGKYSTLF 106          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: A0A6G0XXL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXL0_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 7.040e-21
Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    7 PRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLFS 108
            PRVN A++ QFVG+TV +VG + S       + ++TSDG  +T+    G+ ++S++VEV+G V   G ++E+K T FGD FD+  Y K V L+ GK+S LF+
Sbjct:    8 PRVNKAIMAQFVGRTVALVGSLESWTGSM--AVVKTSDGGLVTVHPQPGADYSSKFVEVIGLVQPDGSLKEYKCTSFGDDFDLKNYDKLVHLIHGKFSSLFA 107          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: A0A485KWY3_9STRA (Aste57867_12966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWY3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 7.230e-21
Identity = 44/106 (41.51%), Postives = 68/106 (64.15%), Query Frame = 0
Query:    2 ETFQTPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLF 107
            E+   PRVN AV+ Q++G+TV +VG + S       + I+TSDG  +T+    G+ +TS++VEV+G V   G ++E+K T FGD FD+  Y K V L+ GK++ +F
Sbjct:    3 ESAPAPRVNKAVMAQYIGRTVALVGSLESWTGSM--AVIKTSDGALVTVHPQPGADYTSKFVEVIGLVKPDGSLQEYKCTSFGDDFDLKNYDKLVHLIHGKFATMF 106          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: A0A8K1C3J4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J4_PYTOL)

HSP 1 Score: 83.2 bits (204), Expect = 2.070e-18
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    7 PRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLF 107
            PRVN   +  FVG+TV IVG + SH   A    + TSDG  + +    GS ++S++VEV+G V +   ++EFK+T FGD+FD+  Y + VQ+   K+ +LF
Sbjct:   12 PRVNKKTMGSFVGRTVAIVGAVESHMPTAVV--LRTSDGGMVNVNPMPGSDYSSKFVEVIGRVVDNNTLQEFKTTLFGDNFDLETYDQFVQVAQSKFRHLF 110          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: D0N6F0_PHYIT (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0N6F0_PHYIT)

HSP 1 Score: 82.0 bits (201), Expect = 6.210e-18
Identity = 41/102 (40.20%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    6 TPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLF 107
            +PRVN   +  +VG TV +VG + SH   A    + TSDG  + ++   G+ + S+ VEV+G V +   + EFK+T FGD+FD+ +Y + VQL   KY +LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHSPTAVV--LRTSDGEIVNVKTQPGTDYGSKVVEVIGRVEDSETIREFKTTLFGDNFDLDVYDQFVQLSQTKYKHLF 112          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: H3H303_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H303_PHYRM)

HSP 1 Score: 81.6 bits (200), Expect = 8.790e-18
Identity = 41/102 (40.20%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    6 TPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLF 107
            +PRVN   +  +VG TV +VG + SH   A +  + TSDG  + +    G+ + S+ VEV+G V +   ++EFK+T FGD+FD+ +Y + VQL   KY +LF
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHTPTAVK--LRTSDGGIVNVTPQPGTDYGSKVVEVIGRVTDSESIQEFKTTLFGDNFDLDVYDQFVQLAQSKYKHLF 112          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: A0A484EA13_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA13_BRELC)

HSP 1 Score: 81.3 bits (199), Expect = 1.150e-17
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0
Query:    6 TPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLFS 108
            +PRVN   +  +VG TV +VG +  H   A    + TSDG  + +    GS + S+ VEV+G V +   ++EFK+T FGD+FD+ +Y + VQL   KY YLF+
Sbjct:   10 SPRVNKTTMGGYVGHTVAVVGTVEKHSPTAVV--LRTSDGGIVNVTPQPGSDYGSKVVEVIGRVVDSETLQEFKTTLFGDNFDLDVYDQFVQLSHSKYKYLFA 110          
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Match: A0A225WD33_9STRA (Uncharacterized protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A225WD33_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.500e-17
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0
Query:    6 TPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTIRMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMTGKYSYLFS 108
            +PRVN   +  +VG TV +VG + SH   A    + TSDG  + +    GS + S+ VEV+G V +   ++EFK+T FGD+FD+ +Y + VQL   KY  LF+
Sbjct:   13 SPRVNKKTMGAYVGHTVALVGAVESHSPTAVV--LRTSDGEIVNVTPQPGSDYGSKVVEVIGRVVDTETIQEFKTTLFGDNFDLDVYDQFVQLSQSKYKQLFA 113          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig878.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA2_ECTSI8.900e-5166.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UTE4_9STRA1.710e-2543.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A024UW39_9STRA1.860e-2347.17Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A6G0XXL0_9STRA7.040e-2143.14Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KWY3_9STRA7.230e-2141.51Aste57867_12966 protein n=1 Tax=Aphanomyces stella... [more]
A0A8K1C3J4_PYTOL2.070e-1841.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N6F0_PHYIT6.210e-1840.20Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
H3H303_PHYRM8.790e-1840.20Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A484EA13_BRELC1.150e-1740.78Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A225WD33_9STRA2.500e-1740.78Uncharacterized protein n=9 Tax=Peronosporaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 2..109
e-value: 7.6E-29
score: 101.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 5..100
IPR013970Replication factor A protein 3PFAMPF08661Rep_fac-A_3coord: 1..100
e-value: 7.9E-21
score: 74.4
NoneNo IPR availablePANTHERPTHR15114REPLICATION PROTEIN A3coord: 4..109
NoneNo IPR availableCDDcd04479RPA3coord: 5..99
e-value: 1.76772E-22
score: 82.3109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig878contigP-littoralis_Contig878:75096..79747 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig878.19.1mRNA_P-littoralis_Contig878.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig878 73815..79925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig878.19.1 ID=prot_P-littoralis_Contig878.19.1|Name=mRNA_P-littoralis_Contig878.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp
METFQTPRVNGAVLEQFVGQTVCIVGKIVSHEEGAPESQIETSDGRKLTI
RMAAGSSWTSQYVEVVGHVHEGGQVEEFKSTDFGDSFDMAMYQKAVQLMT
GKYSYLFSRAQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR013970Rfa2