prot_P-littoralis_Contig878.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig878.12.1
Unique Nameprot_P-littoralis_Contig878.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length518
Homology
BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: D7FV99_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV99_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 2.490e-127
Identity = 263/482 (54.56%), Postives = 307/482 (63.69%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFS-STSADAG-SLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFG-ALLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEGDFKCNVCDIDGVKTISGDDDAASRDIPADQDS-SWGSKDYIIAGLSGVLGLLLILAIGVLVLRRCN-HRTPSDEAQAPP 477
            M  S K+A L L   GL++RQA AV +CP LI+AV A +   T  LE  F CDT I VAA+Q V I+G +TIT+G  F+ ST  DAG SLF+NEG L LD +TF T                       L   GA +SRGGV+YSDS  T+ I DSTF SN+ S+XXXXXXXXXXXXXXXXXXXX   EVGTG  A+GAGGD+Y   +V LTV GT FS S AE+GGAAIECCGA I+N TF              ALLV R D   C  +L L++  F+GCTV    G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L M  V+FN N  PAE Y + D+ QGAAIV+ N+ V ADG   V MGEF   YCF N+PYECEFV+D  DI   G+FKC +CDIDGV+ +SG D   +  I     S SW SKDYII GLS  L L +ILAIG LV R    HR PS E Q PP
Sbjct:    1 MELSRKSAGLALFFLGLAARQASAVTTCPALITAVEAISGTGTAELEGSFTCDTHITVAASQDVTISGAYTITLGPLFAGSTDTDAGGSLFMNEGTLKLDGITFATXXXXXXXXXXXXXXXXXXXXXXELYPTGAFLSRGGVVYSDSAGTISISDSTFTSNLASEXXXXXXXXXXXXXXXXXXXXRGNEVGTGVDADGAGGDVYVGTNVELTVTGTTFSTSVAEYGGAAIECCGAVISNCTFXXXXXXXXXXXXXXALLVNRPDQDPCPRDLDLSDSTFSGCTVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMNYVQFNLNTLPAEAYVT-DTEQGAAIVVTNTGV-ADGETTVTMGEFDDIYCFANEPYECEFVYDQSDIVHNGEFKCQICDIDGVQQVSGTDGDLTGSIDQSSSSNSWDSKDYIIIGLSAALALCIILAIGFLVARAYKKHRAPS-ETQPPP 479          
BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: D7FVA4_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA4_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 1.210e-121
Identity = 256/474 (54.01%), Postives = 310/474 (65.40%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFS-STSADAG-SLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFG-ALLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEGDFKCNVCDIDGVKTISGDDD----AASRDIPADQDSSWGSKDYIIAGLSGVLGLLLILAIGVLVLRRCNHR 467
            M F+ K+A L L   GL++RQA AV +C  LI+AV A +   T+ LE  F C+  I VAA+Q V I+G +TIT+GA F+ ST+ DAG SLF NEG L LD +TF T   DG                  L   G  +SRGGVIYSDS  T+ I DSTF+SN+ S+XXXXXXXXXXXXXXXXXXXXXX EVGTG AA+GAGGD+YA  +V LTV GT FS S AE+GGAAIECCGA I+++ F+G D+         ALLV R D   C  EL L+   F+GCTVG   G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L M+ V+FN N FPAE YA+ D+ QGAAIV+ N+ V ADG   V MGEF   YCF N+PYECEFV+D  DI   G+FKC +CDI+G +  SG DD    A+ R I  D  S       I+ GLS  LGL L++ IG L + +   R
Sbjct:    1 MGFTRKSAVLALFFLGLAARQASAVTTCLALITAVEAISGTGTVELEGGFTCEAYITVAASQDVTISGAYTITLGAPFAGSTNTDAGGSLFENEGTLKLDGITFATETTDGXXXXXXXXXXXXXXXXXELYPTGIFLSRGGVIYSDSAGTISISDSTFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVAADGAGGDVYAGTNVDLTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTXXXXXXXXXALLVNRPDQDGCPRELDLSNSTFSGCTVGSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTFPAEAYAT-DTEQGAAIVVTNTGV-ADGETTVTMGEFNDMYCFANEPYECEFVYDQSDIVHSGEFKCQICDIEGERQQSGTDDDLIDASERSIDGDSSSD---NQGIVIGLSLALGLTLVV-IGALAVWKFRVR 468          
BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: D7FVA0_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA0_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.650e-91
Identity = 197/437 (45.08%), Postives = 239/437 (54.69%), Query Frame = 0
Query:   43 TITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFS-STSADAG-SLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGA--MISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFGA-LLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEGDFKCNVCDIDGVKT-ISGDDDAASRDI----------------------PADQDSS---WGSKDYIIAGLSGVL 448
            T+ LE+ F CD  I V A+Q V I+G +TIT+GA F+ ST+ DAG SLFVNEG L LD +TF T A DG RAVWN            L   G    ++RGGVIYSDSD  + I  STF+SN+ S+                       EVGTG    GAGGD+YA  +V LTV GT FS S AE+                                LLV R D  AC+ EL L++  F+GC+V    G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L M+ V+FN N  PAE YA+ D+ QGAAIV+ N+ V  +G   V MGEF   YCF NDPYECEFV+D  DI   G+F C +C IDGV+  +SG DD +   I                        DQ SS   W SKDY+I GLS  +
Sbjct:    6 TVELESGFTCDAHITVDASQDVTISGAYTITLGALFAGSTATDAGGSLFVNEGTLELDGITFATEATDGNRAVWNGXXXXXXXXXXELFPSGGGEFLARGGVIYSDSDGEIAISASTFKSNIASERGGAVYAIGSETLTITDSLFTVNEVGTGVEEGGAGGDVYAGINVELTVTGTTFSTSAAEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVNRPDQDACSRELDLSDTIFSGCSVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTLPAEAYAT-DTEQGAAIVVTNTGV-EEGNTTVVMGEFNDMYCFGNDPYECEFVYDQSDIVHSGEFNCQLCVIDGVRQEVSGTDDDSVEGIGQTSSSTSVQEGXXXXXXXXTGKIDQSSSSGSWESKDYVIIGLSAAV 440          
BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: A0A6H5L8Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q9_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.740e-66
Identity = 154/248 (62.10%), Postives = 186/248 (75.00%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFSSTSADAGSLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSD 248
            M F+ KTA L LL  GL++RQA AV SC DLI+AV A +   TI LE  F CDT I V A Q V I+G +TITIGAGF+ ++ + GSLFVNEGIL LD +TF T   +G RAVWN+G LSV GC+F L   GA ++RGGVIYSDS   + I +S F+SN+ S+XXXXXXXXXXXXXXXXXXXXXX EVGTG  A+GAGGD+YA  +V LTV GT FS S AE+GGAAIECCGA I+++ F+G D++SD
Sbjct:    1 MGFTSKTAGLALLFLGLAARQASAVTSCLDLITAVEAISDTGTIELEGGFNCDTFITVTAGQDVTISGAYTITIGAGFAGSTDEDGSLFVNEGILKLDGITFVTETTNGNRAVWNAGELSVEGCTFELYPTGAFLARGGVIYSDSAEAIAISNSIFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTASD 248          
BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: A0A6H5K6C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C2_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.920e-35
Identity = 82/142 (57.75%), Postives = 96/142 (67.61%), Query Frame = 0
Query:    1 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFSSTSADAGSLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIY 142
            MV + K+A L LL  GL++RQA AV SC DLI+AV A     TI LE  F CD  I V A Q V I+G +TITIGAGF+ ++   GSLFVNEG L LD +TF T   DG RAVWN GTLSV GC+F L   GA +SRGGVI+
Sbjct:    1 MVLTRKSAGLALLFLGLAARQASAVTSCLDLITAVDAIFDTGTIELEGGFTCDIFITVTAGQDVTISGAYTITIGAGFAGSTGADGSLFVNEGGLKLDGITFATETTDGNRAVWNVGTLSVEGCTFELYPTGAFLSRGGVIF 142          
BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: A0A6H5L0R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 5.530e-18
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 0
Query:  141 IYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSD 248
            IYSDS   + I +S F+SN+ S+                       EVGTG  A+GAGGD+YA  +V LTV GT FS S AE+GGAAIECCGA I+++ F+G D++SD
Sbjct:   14 IYSDSAGIITISNSIFKSNLASERGGAVYAIGSETLTITDSLFRGNEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTASD 121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FV99_ECTSI2.490e-12754.56Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FVA4_ECTSI1.210e-12154.01Probable extracellular nuclease n=1 Tax=Ectocarpus... [more]
D7FVA0_ECTSI1.650e-9145.08Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5L8Q9_9PHAE1.740e-6662.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6C2_9PHAE1.920e-3557.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0R7_9PHAE5.530e-1847.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..517
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 29..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig878contigP-littoralis_Contig878:51318..59333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig878.12.1mRNA_P-littoralis_Contig878.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig878 51318..59344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig878.12.1 ID=prot_P-littoralis_Contig878.12.1|Name=mRNA_P-littoralis_Contig878.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=518bp
MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADF
YCDTQIDVAAAQVVRITGDFTITIGAGFSSTSADAGSLFVNEGILSLDSV
TFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVD
IQDSTFESNVVSDRGGAICAVGNETLTVTDCIFRNNEVGTGEAAEGAGGD
IYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLE
HFGALLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATL
LDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQ
GAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEG
DFKCNVCDIDGVKTISGDDDAASRDIPADQDSSWGSKDYIIAGLSGVLGL
LLILAIGVLVLRRCNHRTPSDEAQAPPPPPAATSLPAATSASAATAPPAS
TGAPATTGTIEPAAHPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence