mRNA_P-littoralis_Contig878.12.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig878.12.1
Unique Name	mRNA_P-littoralis_Contig878.12.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: D7FV99_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV99_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 1.950e-127
Identity = 263/482 (54.56%), Postives = 307/482 (63.69%), Query Frame = 3

Query:   12 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFS-STSADAG-SLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFG-ALLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEGDFKCNVCDIDGVKTISGDDDAASRDIPADQDS-SWGSKDYIIAGLSGVLGLLLILAIGVLVLRRCN-HRTPSDEAQAPP 1442
            M  S K+A L L   GL++RQA AV +CP LI+AV A +   T  LE  F CDT I VAA+Q V I+G +TIT+G  F+ ST  DAG SLF+NEG L LD +TF T                       L   GA +SRGGV+YSDS  T+ I DSTF SN+ S+XXXXXXXXXXXXXXXXXXXX   EVGTG  A+GAGGD+Y   +V LTV GT FS S AE+GGAAIECCGA I+N TF              ALLV R D   C  +L L++  F+GCTV    G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L M  V+FN N  PAE Y + D+ QGAAIV+ N+ V ADG   V MGEF   YCF N+PYECEFV+D  DI   G+FKC +CDIDGV+ +SG D   +  I     S SW SKDYII GLS  L L +ILAIG LV R    HR PS E Q PP
Sbjct:    1 MELSRKSAGLALFFLGLAARQASAVTTCPALITAVEAISGTGTAELEGSFTCDTHITVAASQDVTISGAYTITLGPLFAGSTDTDAGGSLFMNEGTLKLDGITFATXXXXXXXXXXXXXXXXXXXXXXELYPTGAFLSRGGVVYSDSAGTISISDSTFTSNLASEXXXXXXXXXXXXXXXXXXXXRGNEVGTGVDADGAGGDVYVGTNVELTVTGTTFSTSVAEYGGAAIECCGAVISNCTFXXXXXXXXXXXXXXALLVNRPDQDPCPRDLDLSDSTFSGCTVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMNYVQFNLNTLPAEAYVT-DTEQGAAIVVTNTGV-ADGETTVTMGEFDDIYCFANEPYECEFVYDQSDIVHNGEFKCQICDIDGVQQVSGTDGDLTGSIDQSSSSNSWDSKDYIIIGLSAALALCIILAIGFLVARAYKKHRAPS-ETQPPP 479

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BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: D7FVA4_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA4_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 9.460e-122
Identity = 256/474 (54.01%), Postives = 310/474 (65.40%), Query Frame = 3

Query:   12 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFS-STSADAG-SLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFG-ALLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEGDFKCNVCDIDGVKTISGDDD----AASRDIPADQDSSWGSKDYIIAGLSGVLGLLLILAIGVLVLRRCNHR 1412
            M F+ K+A L L   GL++RQA AV +C  LI+AV A +   T+ LE  F C+  I VAA+Q V I+G +TIT+GA F+ ST+ DAG SLF NEG L LD +TF T   DG                  L   G  +SRGGVIYSDS  T+ I DSTF+SN+ S+XXXXXXXXXXXXXXXXXXXXXX EVGTG AA+GAGGD+YA  +V LTV GT FS S AE+GGAAIECCGA I+++ F+G D+         ALLV R D   C  EL L+   F+GCTVG   G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L M+ V+FN N FPAE YA+ D+ QGAAIV+ N+ V ADG   V MGEF   YCF N+PYECEFV+D  DI   G+FKC +CDI+G +  SG DD    A+ R I  D  S       I+ GLS  LGL L++ IG L + +   R
Sbjct:    1 MGFTRKSAVLALFFLGLAARQASAVTTCLALITAVEAISGTGTVELEGGFTCEAYITVAASQDVTISGAYTITLGAPFAGSTNTDAGGSLFENEGTLKLDGITFATETTDGXXXXXXXXXXXXXXXXXELYPTGIFLSRGGVIYSDSAGTISISDSTFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVAADGAGGDVYAGTNVDLTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTXXXXXXXXXALLVNRPDQDGCPRELDLSNSTFSGCTVGSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTFPAEAYAT-DTEQGAAIVVTNTGV-ADGETTVTMGEFNDMYCFANEPYECEFVYDQSDIVHSGEFKCQICDIEGERQQSGTDDDLIDASERSIDGDSSSD---NQGIVIGLSLALGLTLVV-IGALAVWKFRVR 468

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BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: D7FVA0_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA0_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 1.810e-91
Identity = 197/437 (45.08%), Postives = 239/437 (54.69%), Query Frame = 3

Query:  138 TITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFS-STSADAG-SLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGA--MISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLEHFGA-LLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATLLDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQGAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEGDFKCNVCDIDGVKT-ISGDDDAASRDI----------------------PADQDSS---WGSKDYIIAGLSGVL 1355
            T+ LE+ F CD  I V A+Q V I+G +TIT+GA F+ ST+ DAG SLFVNEG L LD +TF T A DG RAVWN            L   G    ++RGGVIYSDSD  + I  STF+SN+ S+                       EVGTG    GAGGD+YA  +V LTV GT FS S AE+                                LLV R D  AC+ EL L++  F+GC+V    G GGS+AIFDTSAT+ DC FE SVGTAV F SSS +GEH+L M+ V+FN N  PAE YA+ D+ QGAAIV+ N+ V  +G   V MGEF   YCF NDPYECEFV+D  DI   G+F C +C IDGV+  +SG DD +   I                        DQ SS   W SKDY+I GLS  +
Sbjct:    6 TVELESGFTCDAHITVDASQDVTISGAYTITLGALFAGSTATDAGGSLFVNEGTLELDGITFATEATDGNRAVWNGXXXXXXXXXXELFPSGGGEFLARGGVIYSDSDGEIAISASTFKSNIASERGGAVYAIGSETLTITDSLFTVNEVGTGVEEGGAGGDVYAGINVELTVTGTTFSTSAAEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVNRPDQDACSRELDLSDTIFSGCSVVSTTGAGGSVAIFDTSATITDCTFESSVGTAVLFSSSSDSGEHQLLMDYVQFNLNTLPAEAYAT-DTEQGAAIVVTNTGV-EEGNTTVVMGEFNDMYCFGNDPYECEFVYDQSDIVHSGEFNCQLCVIDGVRQEVSGTDDDSVEGIGQTSSSTSVQEGXXXXXXXXTGKIDQSSSSGSWESKDYVIIGLSAAV 440

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BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: A0A6H5L8Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q9_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.330e-66
Identity = 154/248 (62.10%), Postives = 186/248 (75.00%), Query Frame = 3

Query:   12 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFSSTSADAGSLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSD 755
            M F+ KTA L LL  GL++RQA AV SC DLI+AV A +   TI LE  F CDT I V A Q V I+G +TITIGAGF+ ++ + GSLFVNEGIL LD +TF T   +G RAVWN+G LSV GC+F L   GA ++RGGVIYSDS   + I +S F+SN+ S+XXXXXXXXXXXXXXXXXXXXXX EVGTG  A+GAGGD+YA  +V LTV GT FS S AE+GGAAIECCGA I+++ F+G D++SD
Sbjct:    1 MGFTSKTAGLALLFLGLAARQASAVTSCLDLITAVEAISDTGTIELEGGFNCDTFITVTAGQDVTISGAYTITIGAGFAGSTDEDGSLFVNEGILKLDGITFVTETTNGNRAVWNAGELSVEGCTFELYPTGAFLARGGVIYSDSAEAIAISNSIFKSNLASEXXXXXXXXXXXXXXXXXXXXXXNEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTASD 248

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BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: A0A6H5K6C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C2_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.440e-35
Identity = 82/142 (57.75%), Postives = 96/142 (67.61%), Query Frame = 3

Query:   12 MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADFYCDTQIDVAAAQVVRITGDFTITIGAGFSSTSADAGSLFVNEGILSLDSVTFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIY 437
            MV + K+A L LL  GL++RQA AV SC DLI+AV A     TI LE  F CD  I V A Q V I+G +TITIGAGF+ ++   GSLFVNEG L LD +TF T   DG RAVWN GTLSV GC+F L   GA +SRGGVI+
Sbjct:    1 MVLTRKSAGLALLFLGLAARQASAVTSCLDLITAVDAIFDTGTIELEGGFTCDIFITVTAGQDVTISGAYTITIGAGFAGSTGADGSLFVNEGGLKLDGITFATETTDGNRAVWNVGTLSVEGCTFELYPTGAFLSRGGVIF 142

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BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Match: A0A6H5L0R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 5.590e-18
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 3

Query:  432 IYSDSDATVDIQDSTFESNVVSDXXXXXXXXXXXXXXXXXXXXXXXEVGTGEAAEGAGGDIYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSD 755
            IYSDS   + I +S F+SN+ S+                       EVGTG  A+GAGGD+YA  +V LTV GT FS S AE+GGAAIECCGA I+++ F+G D++SD
Sbjct:   14 IYSDSAGIITISNSIFKSNLASERGGAVYAIGSETLTITDSLFRGNEVGTGVDADGAGGDVYAGTNVELTVTGTTFSTSAAEYGGAAIECCGAVISDTVFTGADTASD 121

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig878.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6


Match Name	E-value	Identity	Description
D7FV99_ECTSI	1.950e-127	54.56	Polymorphic outer membrane protein n=1 Tax=Ectocar...	[more]
D7FVA4_ECTSI	9.460e-122	54.01	Probable extracellular nuclease n=1 Tax=Ectocarpus...	[more]
D7FVA0_ECTSI	1.810e-91	45.08	Polymorphic outer membrane protein n=1 Tax=Ectocar...	[more]
A0A6H5L8Q9_9PHAE	1.330e-66	62.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K6C2_9PHAE	1.440e-35	57.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L0R7_9PHAE	5.590e-18	47.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig878	contig	P-littoralis_Contig878:51318..59344 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	1565
Hectar predicted targeting category	signal peptide
Exons	6
Cds size	1554

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig878.12.1	prot_P-littoralis_Contig878.12.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig878 51318..59333 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791759.6419454-CDS-P-littoralis_Contig878:51317..51600	1680791759.6419454-CDS-P-littoralis_Contig878:51317..51600	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig878 51318..51600 -
1680791759.653244-CDS-P-littoralis_Contig878:52061..52240	1680791759.653244-CDS-P-littoralis_Contig878:52061..52240	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig878 52062..52240 -
1680791759.6677494-CDS-P-littoralis_Contig878:52634..52745	1680791759.6677494-CDS-P-littoralis_Contig878:52634..52745	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig878 52635..52745 -
1680791759.6796865-CDS-P-littoralis_Contig878:52887..53121	1680791759.6796865-CDS-P-littoralis_Contig878:52887..53121	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig878 52888..53121 -
1680791759.6919086-CDS-P-littoralis_Contig878:53616..53943	1680791759.6919086-CDS-P-littoralis_Contig878:53616..53943	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig878 53617..53943 -
1680791759.7126153-CDS-P-littoralis_Contig878:58913..59333	1680791759.7126153-CDS-P-littoralis_Contig878:58913..59333	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig878 58914..59333 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791759.7266793-UTR-P-littoralis_Contig878:59333..59344	1680791759.7266793-UTR-P-littoralis_Contig878:59333..59344	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig878 59334..59344 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig878:51318..59344-
coding sequence from alignment at P-littoralis_Contig878:51318..59344-

protein sequence of mRNA_P-littoralis_Contig878.12.1

>prot_P-littoralis_Contig878.12.1 ID=prot_P-littoralis_Contig878.12.1|Name=mRNA_P-littoralis_Contig878.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=518bp
MVFSLKTAALGLLSFGLSSRQAMAVISCPDLISAVGAAATEITITLEADF
YCDTQIDVAAAQVVRITGDFTITIGAGFSSTSADAGSLFVNEGILSLDSV
TFDTLANDGIRAVWNSGTLSVTGCSFSLLSDGAMISRGGVIYSDSDATVD
IQDSTFESNVVSDRGGAICAVGNETLTVTDCIFRNNEVGTGEAAEGAGGD
IYADRDVALTVDGTLFSGSTAEFGGAAIECCGATITNSTFSGTDSSSDLE
HFGALLVGRRDATACTNELSLTEVNFAGCTVGHEVGMGGSLAIFDTSATL
LDCKFEESVGTAVFFESSSAAGEHRLEMENVEFNYNRFPAETYASADSSQ
GAAIVMVNSAVVADGGDAVNMGEFFKTYCFLNDPYECEFVFDGVDITDEG
DFKCNVCDIDGVKTISGDDDAASRDIPADQDSSWGSKDYIIAGLSGVLGL
LLILAIGVLVLRRCNHRTPSDEAQAPPPPPAATSLPAATSASAATAPPAS
TGAPATTGTIEPAAHPR*

mRNA from alignment at P-littoralis_Contig878:51318..59344-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig878.12.1 ID=mRNA_P-littoralis_Contig878.12.1|Name=mRNA_P-littoralis_Contig878.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8027bp|location=Sequence derived from alignment at P-littoralis_Contig878:51318..59344- (Pylaiella littoralis U1_48)
CTGCTGCCACGATGGTGTTCTCCCTCAAGACCGCCGCCCTCGGCCTGCTG
TCGTTTGGGCTTTCTTCAAGGCAGGCCATGGCGGTTATAAGCTGCCCTGA
TCTCATCAGCGCTGTCGGAGCTGCTGCGACAGAAATAACGATCACCCTCG
AGGCAGACTTTTACTGTGACACACAAATCGACGTCGCCGCTGCACAGGTT
GTGAGAATCACCGGTGACTTCACCATCACCATCGGCGCCGGTTTCTCCAG
CACCAGCGCAGACGCAGGAAGCCTGTTCGTGAACGAGGGCATCCTTTCAC
TGGACAGTGTCACGTTCGATACCTTGGCTAATGATGGAATCCGCGCGGTA
TGGAACAGCGGAACGCTCTCGGTGACTGGGTGCTCCTTTTCTCTCTTGTC
GGACGGAGCAATGATCAGCAGGGGCGGCGTGGTGAGTGACAAACCGGTGC
CCACACATTTAGTTGCAGCGTAGCATCGCTGTTCACTGGCACTTCCAATA
ATTGTCTCCTTTGCCTTACAATAATAGAAATTGTTCCAAAACGCCAAGAC
TTTCTTCTGTCGGTGGTCATGAATGCCTTCGTTTATCGCGTCTATGTATC
CCTTGAGATTTTATTTGTATGATTTCCGAAGCGTTCACCAGTTGATTGAC
TCGCTGGTCACGTGCGAGTACTCACGGTCCTTCTCACAAACGATTTTTTG
TCATCGTCAATAGGGTCTTTGCGCAAAAGAAATGCTTTTCTCAAAAATCC
TTTCTGAGTAACCCCGGGAGGCCCCGCCGACCGCAAGGAAATAAATACTC
CGAGTATTTGTTTCAAATTCCACAAATTCCCTGGAAGAAACGATACTTGA
AAAGGATATTTGATCTGCCGGCGAGACTGTGCAAGGCCACATGTGATCGG
TCACGAGATACCCCTGCCTGAGACAAGCGGCCAGCCCTCTGCTGTCGCAG
CACAGAGCGAAGAGGGGCTGGTGCTAGATATACGCTTGCAGCCAGACGAT
GGCGGCGAGGAAACTGCGCCACATTATAAATGTTAAAATCAATCGACGCT
ACGGCGCACTTTGCGCTGTGGAGAGCGTGTGTGTGCGGATCAGGCATTTG
CTACTGCAGGCATCGCGTTTGTTTGGCGCTTCGGAGAGCACTGAGGACGA
CGTTTGTTTGTCGTTGCGGATGCGAGCCCGCCTTCGGTTGACCCATCTCT
CTGCTGCATCTCCTTACGGTGCTCCAGCACTATCCACTGCCACGATACGG
TAGTATGATGTGTCAGGGTGATCTCTTTTAAAGCAGCAGAGTGCGTCAGT
GTGTGTGTTCCTCTGTCAGCAGTAAGTAGTTGAGTTTTTGATTCTCACAT
TAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATAT
CGTGCTAGGAGGAAAAATAAAAATAAAAGAAATAAACAGTAAACGATGGC
CACACCCAAACAAAATCAGAGAAGGTACCTTTGGGGTACCTTCTGTGGTG
GCCGAGTTACAAATACAGAGATACAGGCCCGAAAAAACAGAAATTGGAAA
CAAACAAAACCAGGGCGAACCAAACAGCAGCTTCCCAACCAGAGCTCAAG
AGCCCAGACCGACCAAGGCACTCCAGAGCGCAGAGCCCAGTATAAGGCAC
ACCAAGAACAAGAGGAAGACACCGAAAGCCGAGAGGTGAAAGGCTGGAGC
CAGAAGACGAAAGACTAAAAGGACTAAAGAGGAGGACAGAATGAGGGAGG
AAAAACAAACAAAGAGGAAGGAAGCAAGAAAATAAAAAAATAAAATGAGA
AAACGGCACAGAGAAAACAACACAAGAGAGCCGAGCAAAAAGGACGGAAA
TCGAAAAAGAGGAAAAGAAAAGGCATGCAGTCAGTCAGTCGCACATCTCT
CGCCACGAGGTCTGCCTGTTCGCGCTTGCTCTCCTCAGACGTACTCACTC
CACTCGTCACTGGCACCACCGTAGACGGTTGCTTCTGCCCTACGTCTTTG
GCAGCAGCCACACCGCTTCACGATTTCTGCCCTACAGTTCTTTCAATCCG
GTCCGGTCACCCCGCAGCTTGGCTTGGGGTTGCTTCTTCTGAGCGCAGCT
TTCACCCCACTACGCCGCTGCGTGGAGGACTTTCCCCCCAGCTTTGGTCC
CCCGTGTTCCTCCTCTCGTCTATCCCCGCCATCCATTCTCTCTCTCTTGG
CCAAAGCCTGTCCCTCAGCCGTCCCTCTCCCTCTTCAGTCGACGTGTCTC
TTTGAAGTCTCCCTCTTTCTTGAACCAGTGGGTGTGTTTGGTGTTTGGTG
TGTGTGTGCGTCTGTTGTTTGGCGTGTCGGCACTTGGTGCCCCAAGCGAA
GCGAGAGCCACCCCCGTCGCCTCGTGATCACCGCTTTCTTATGGGAAAGG
TCCTAGAAATTGTTAGGAAACATTCCTACTACTCCCGGTTCTCATAATAC
TTCAGTATTTTCACGACGGGTTATTCTTCTCATATACTGTGGGATGAAAC
GGTGGCATCACCTCCCGCGGCTGGTGATGTCACCCTCTCCCATACTCCTT
AAACCCTCAAACATCTTCGATAGTAAAGGGTCCTTCCCCTACACTATATT
TTCATGTATATATTTTGTAAGTTAAAGGCTTGTTTCCGAACGCTACCAAC
GACCGGCTCTGCTCGCTCAAGGGAAACTCGTTGAGCTCCCTGTATTGTTC
TTCCGTAACTCCGTCTACAATGCCATCGGTTCCTGCCTCGGGCCCGACTA
CCTCCATTAACCGCATGTACCGGTTGAGAGTGGGAGGAGGTGAGGCGTAC
TAATGAGTGTATGGGATGATATGATATGATACGTCTTTTGTGACTGCGTG
CCGAGGAGTGGGAGGACGGGAAAGCAGGGCAGTGATAAACGGCGGACATT
CGGTGAGGGAAGAAATGGCTACTGTACTTTTCCGAACCCATCCTGTGTTC
TTGAAAAGGAGAAAAATTAAAAAGAAAAACCTCAGGGCGCGTCCCGACTC
AAAATTTGTGACAGGCTTTATGTGTGGCTGTGTGTGTGTTTTGAGAGACC
TGTCGTTCGAGGCGGCGGTTGAGGCGTGCTTAACGGCGGCTGACACTCGG
CTCGCGCGTCGAGTCTCGAGCCCGCAGCATCAGGAGCGTCGAGACGGAAA
GATATTCCTCGTCCACGCCGCGAGTAAAATTTCCGTCAACGGCCACAGCT
GGAGGGGCGAGGAAAGCATCTTGATCTGAGACTGGGTCAAGTCGTCCCGC
TGCGCTCACAGCGGCCTTAAACTAAAGATTTAGGTTGACCTAATACTTAC
AGCACTAATTACCCCGAAATGCCCCCCCGAAATCGACCCGCACCGCGAGC
ACCGCACAGCTCTAATTCAAAAGGTGAATTAAGAAAGCATGTGCGACGCA
CACTCCACACCCCAGAAACAAACATGGATTTTCGACCGATCAGAACCCGA
TGGGGCCATGACATTAGTTACGGGCCCACGTCGATGGTAGATATAAAAAA
CTGAAACGCGAACACGAAAGCGGAATTGGGCTCTGATTAATCGGCGCAAA
AAAAAAAAGGAGAATTTTGTTTTTCGGCCCTCCGAGAAGGCGTGTTTACA
TTTTCCACTTCCCGATTTAATGCGGTGTTTTGGACCTTTCGTCTAGCTGA
AACGAAAACAAAATCGACATGGAAGGTTTGTTAGCGGGGACGCTTCGGCT
CTGTAAGGCATCTGCGTTAGACTTTTGCACAGCAGACAATTTAACATTTT
GACTGATGACTCTCGTCTCTCGTCACACAGGGGACGACGTTTCCCTGATT
TTTGCACGTCTAGAGACGTGTGGGTTCGGCGCCAACTAGGAATGCCCAAG
GTTCGGGCCGGTGGGATGCAACGCGTGACGGCCAAAACTTTTGCAACTCG
TGCACAACCACCCGCTCGCGCATTGAGCCGCTCTTTCGTGTGAGTTTCGC
AAGCAGCCAAGCCCACGTTTTCACGGATATCTCGCCGGAAAATGGACGAC
ATTCCCGACCAACTGCGTCCCTAGAGAGATGGGTCTCCTGCTGGCCGTTG
GAGAACGCCTAAGGTTTTTGGGCGGTGGGTGTCAAACGTCACATGAAACG
AGGGATCAGCCTTAAAAAAAATTGTCAAACAACGAGCAGTCGACTTGGCC
TCTTTCGCGTGGGAGGCGGTTGATTCAAGAGGTTTCTTCCCGTCGCGTTT
GGTCCGGCACTGCTCCGAACCTCAACCTGTTCCCGGTAGAGGGTAGCGTA
TCTCTGTGTCGGTGCAGTTGGTTCGCACGGACACTTGTCAAGTCTTGGGC
GAGATATCAGTGAAAACGTGAACCTTGCCCCTTTCAAGAGTCAACGCAAG
CAAATGGTGTGGCTCTCGCGCATCCCCTCTTCTTCCCTACCCTGGTACCA
GGTCCGTTGTGACAGGCGCTCAAAAACAAGAGGTGCGCTCGTTCGTTGAT
ACACAACGAGGCGTTTTTTTTTTCCCGGAAACACTGATTTTCGTTGTGCG
GACCTAATTTCAGTTCTCTCGGTCCGCCGTTTCCTATAGACTCTTTGATA
ATAGAAAAACTGTGGGATCTCCCTTGTGACGGTTCAGTCCCTCAAAACTA
CTGAAAACCAAAAAATGGAGGTTTGATGCACGTGGCGGTTTTTCTTTCGA
ACACTACCTTTTCCCGCTGACTGTTTTGCCTATTATTGTCTCTGTAAATT
AGAGAGTTAGTTCGCCTTGGCGGGCAGGGTTTCAATGTTTTCATGCCATA
TTTTCTTGTTCCTCTAGGAGTAAATGTAACGGTTTAGCGGTGGTTTTCTG
GGTGGTTGCCGCCTCACACACCATACACTGCAGAGATGCAGCAGTCCAGA
AAAAAATACGGTATGGTCGAGTTCATCTCTGCGCTACAGCACACAACACC
TCACATCCACTTGCTGCTTCTGCGCAATGGAAAAGACACAACAGCGTAGA
TGAAACGGAGTAGCAGCAGGAACCTACAATATGGAGGTATGGAACTGGAG
GTCAAAGGGTGTTGTCGTGCGTCGGCTATGTAGCTGCTCTATATATAAGA
TGTACTACAGTCCAGTATGTAGCTCGAGTGACTAGTGAACTAATGAAGGG
TAAAATCAACTGTATGATCCAGCCGTTTGTGCTTGAGCGTTCGCACACGA
TCGTTTGTGTGCGGCTGGCTAAATGTATGCATGCCTTGATCGTTTCACGC
GCGGTGCTTTCTTGGCGGTGCCCTGCAGCCTAGGTTATGAACTACGTGGC
CGTGTGCGGACAGCATCGCGCTGAAAACTCGTCGTTAGTGCTCTCGTGCT
ATGAGGACAAGGACGCACCACCATTTTCGCCTTTGACCGCACATGCTTCT
ACCCGGTGGCTGACGATATCAACCTGCTCCGACCCCTCTGTGTCGTTTCA
GATCTACTCCGACTCCGACGCAACAGTCGACATTCAAGACTCGACCTTCG
AGTCTAACGTCGTGAGCGACAGGGGCGGTGCTATTTGTGCCGTCGGCAAC
GAAACCCTCACCGTCACGGACTGCATTTTCAGGAACAACGAGGTTGGGAC
GGGCGAGGCGGCGGAAGGTGCCGGAGGCGATATTTACGCCGACCGGGATG
TAGCGCTCACGGTCGATGGGACTTTGTTTAGTGGCTCTACAGCTGAGTTT
GGTGGGGCGGCCATCGAGTGCTGTGGTGCCACAATCACCAACTCCACCTT
TTCGGGCACGGATTCGAGCTCTGACTTGGTGAGGTTCTACATAGTTCTTC
GGAGTACAGTACTGCTGCGTCGTTTGATATTACCAAAACATTACTGATGG
GTATCCCCGCCGCTTTCCGTTTTCGCTCCACGGGAATGTCGCCTACCTCA
ATGCACTCGGAATACCCACGTCTTCCGTGCGCGACGGTCTTTTCTGGTGT
ACATACCATAGGTGTCGTATTCTAGAGTTTTTTTGAGTCGTCAACTTGTG
CACACACTTGTTTGTCTTCCTGCCGACAACGTGCTGTTCGGCGACGGCAG
TGTTGATTTCGTTTTTGTCAGCTAGCATTCGTGCTTCCATCGACCGAGGC
AAGTCTTGAAGTACGAAGCCAGGGCAGCAGCGTTGTGTCCCAGCATGGGT
TTCTGGTGAGGATGAAGAACGTTTACTGTGGCTGTTGTTGGCCCACTCTA
CCGTACTGCGATGCACCACAGGGCGTTTTGACCCCTCATCCCATCGCCTC
CGCAACACTTTTTTTTTTATCAGGAGCACTTCGGTGCACTACTGGTCGGC
CGCCGTGACGCAACCGCGTGCACGAATGAGCTTTCACTCACGGAGGTCAA
TTTCGCCGGTTGCACAGTGGGGCATGAAGTCGGGATGGGCGGTTCTTTGG
CCATTTTCGACACCTCAGCTACCCTCCTGGACTGCAAGTTTGAGGAGAGC
GTCGGGACGGCCGTGTTTTTCGAGTCTTCTAGCGCTGCCGGAGAGCACCG
CCTCGAAGTGAGTAAAGATTTGATCATGTCAAGCATTTCGACCGACGCTG
TCACTGCGCTTGTAGCATCAAGATGTGTGCGAGTAGTCCGTCCTGGCTAA
CGGCGGTTCACCCCTTCCCATGCTCCCCTTCTGCTGGTGTCGTTTTTAGA
TGGAGAACGTGGAGTTCAACTACAACCGTTTCCCCGCAGAGACGTACGCG
TCTGCTGATAGTTCCCAGGGTGCCGCCATCGTGATGGTCAACTCGGCCGT
GGTGGCAGATGTGAGTTCGTGTTTGGCCCATGCATGGGCTGTCGTGATTT
TCTTACACGTGTTGTACGTAGCCGGCCGTGGCACTTCGAATGAACGCATT
AGGGCTTCTAGACGATGTGTTGCTTGTCAGGTCATCTGGGTTGCGCTATG
ACTAGCAGTACTATGGCGGAGGGATAATGTACGATGTGGCCCTTGTGAAA
AACCGTGGTGTTGCTGTGGAGCACCGCGGTTGGCGGGATGTTCGCAGCAA
GGCACGCTGCCTCGAGCAAGAGGCTGGGTATAAAACTACACACAGCGCCC
TTTTGCCGGCGATCAAAGGCGCCAAGAGTTTTGTCACTGGTGATTTCGCG
CTGACCCGTTTGACTGACGTCGAGTGATATGTCGTGTATTCCCATCCATC
GCAGGGAGGCGACGCGGTGAACATGGGCGAGTTTTTCAAAACGTACTGCT
TTTTGAACGACCCGTACGAGTGCGAGTTTGTGTTCGACGGGGTGGACATC
ACCGACGAGGGGGATTTCAAATGCAACGTCTGCGATATCGATGGAGTGAA
GACGATCAGTGGCGACGACGACGCCGCGTCACGGTAAGTTATGACAAGTG
TAGGAAGACTTTCGTGATGTACAGAACTTGCGGGTCTGATATGCCAGCCG
TCCACTTTTAGGATTGCAGAAAACTTGCTTGAAACCATGCCAGGGTTCGT
GCCTACCATACCCGATAGTCATTTGCGTGTCACAAGAAGCGCGGCACCCG
AAGTGTCGTGGTGTGTGTTCTCAACGGTGGTGCTACGGCCATAGTGGAGC
GATCGCTGTTGTTGTAAGCACGAAAGTTTGGCCAGGCTCCTGTCAGCGAT
TATCCCACCCATTTATTCTGAAGATAGATGCACATTCCCTCATACGGTCG
TTATGTACGCATGTTCTCTTCGTGTGCTTAACTGCAGATCACGAAGACAC
AACTTAAGCGCGACAATCATGACAAAACAACCAACGCCTTTTTTTTTCCC
ACACCCACAATGTATGTCTGTGCAATGCATGTCCACGAAAGCAGAGACAT
CCCTGCTGACCAGGACTCGTCGTGGGGCTCCAAAGACTACATCATCGCCG
GCCTCTCGGGAGTGTTGGGCTTGTTGTTGATCCTGGCGATTGGTGTTCTG
GTGCTACGGAGGTGCAACCACAGAACGCCCTCTGACGAAGCTCAGGCGCC
ACCACCCCCGCCCGCCGCAACGTCTCTGCCCGCCGCAACGAGCGCATCTG
CTGCAACAGCTCCGCCTGCGTCGACAGGAGCACCTGCCACAACTGGGACG
ATTGAGCCCGCTGCGCACCCGCGATGA

Coding sequence (CDS) from alignment at P-littoralis_Contig878:51318..59344-

>mRNA_P-littoralis_Contig878.12.1 ID=mRNA_P-littoralis_Contig878.12.1|Name=mRNA_P-littoralis_Contig878.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1554bp|location=Sequence derived from alignment at P-littoralis_Contig878:51318..59344- (Pylaiella littoralis U1_48)
ATGGTGTTCTCCCTCAAGACCGCCGCCCTCGGCCTGCTGTCGTTTGGGCT
TTCTTCAAGGCAGGCCATGGCGGTTATAAGCTGCCCTGATCTCATCAGCG
CTGTCGGAGCTGCTGCGACAGAAATAACGATCACCCTCGAGGCAGACTTT
TACTGTGACACACAAATCGACGTCGCCGCTGCACAGGTTGTGAGAATCAC
CGGTGACTTCACCATCACCATCGGCGCCGGTTTCTCCAGCACCAGCGCAG
ACGCAGGAAGCCTGTTCGTGAACGAGGGCATCCTTTCACTGGACAGTGTC
ACGTTCGATACCTTGGCTAATGATGGAATCCGCGCGGTATGGAACAGCGG
AACGCTCTCGGTGACTGGGTGCTCCTTTTCTCTCTTGTCGGACGGAGCAA
TGATCAGCAGGGGCGGCGTGATCTACTCCGACTCCGACGCAACAGTCGAC
ATTCAAGACTCGACCTTCGAGTCTAACGTCGTGAGCGACAGGGGCGGTGC
TATTTGTGCCGTCGGCAACGAAACCCTCACCGTCACGGACTGCATTTTCA
GGAACAACGAGGTTGGGACGGGCGAGGCGGCGGAAGGTGCCGGAGGCGAT
ATTTACGCCGACCGGGATGTAGCGCTCACGGTCGATGGGACTTTGTTTAG
TGGCTCTACAGCTGAGTTTGGTGGGGCGGCCATCGAGTGCTGTGGTGCCA
CAATCACCAACTCCACCTTTTCGGGCACGGATTCGAGCTCTGACTTGGAG
CACTTCGGTGCACTACTGGTCGGCCGCCGTGACGCAACCGCGTGCACGAA
TGAGCTTTCACTCACGGAGGTCAATTTCGCCGGTTGCACAGTGGGGCATG
AAGTCGGGATGGGCGGTTCTTTGGCCATTTTCGACACCTCAGCTACCCTC
CTGGACTGCAAGTTTGAGGAGAGCGTCGGGACGGCCGTGTTTTTCGAGTC
TTCTAGCGCTGCCGGAGAGCACCGCCTCGAAATGGAGAACGTGGAGTTCA
ACTACAACCGTTTCCCCGCAGAGACGTACGCGTCTGCTGATAGTTCCCAG
GGTGCCGCCATCGTGATGGTCAACTCGGCCGTGGTGGCAGATGGAGGCGA
CGCGGTGAACATGGGCGAGTTTTTCAAAACGTACTGCTTTTTGAACGACC
CGTACGAGTGCGAGTTTGTGTTCGACGGGGTGGACATCACCGACGAGGGG
GATTTCAAATGCAACGTCTGCGATATCGATGGAGTGAAGACGATCAGTGG
CGACGACGACGCCGCGTCACGAGACATCCCTGCTGACCAGGACTCGTCGT
GGGGCTCCAAAGACTACATCATCGCCGGCCTCTCGGGAGTGTTGGGCTTG
TTGTTGATCCTGGCGATTGGTGTTCTGGTGCTACGGAGGTGCAACCACAG
AACGCCCTCTGACGAAGCTCAGGCGCCACCACCCCCGCCCGCCGCAACGT
CTCTGCCCGCCGCAACGAGCGCATCTGCTGCAACAGCTCCGCCTGCGTCG
ACAGGAGCACCTGCCACAACTGGGACGATTGAGCCCGCTGCGCACCCGCG
ATGA