mRNA_P-littoralis_Contig878.7.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: D7FV97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV97_ECTSI) HSP 1 Score: 213 bits (543), Expect = 5.920e-63 Identity = 104/116 (89.66%), Postives = 111/116 (95.69%), Query Frame = 1
Query: 196 QAERAQRRVYLGPLVRFKFQDSSNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNR 543
+AE+AQRRVY+GP+ RFKFQD+SNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASF+HEAALCFQKDDPQEAAACYLSAINLFCQ Q FSTAARLECEVA LM N+R
Sbjct: 4 EAEKAQRRVYMGPMARFKFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDR 119
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: UPI001C9D05F1 (alpha-soluble NSF attachment protein n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9D05F1) HSP 1 Score: 110 bits (275), Expect = 3.750e-23 Identity = 80/292 (27.40%), Postives = 137/292 (46.92%), Query Frame = 1
Query: 247 KFQDSSNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNRNYRQAIVHHIK-AADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWY----LRVLKTISDH 1107
K +++ + A F++AK++ AG A+ + L K + AA+ + +AA C++K DP EAA C + AI ++ RF+ AA+ +A + + + VHH + AAD++R +A++CLLK + +A L NY +A +++QV L LLK++A + F +A LC C L + + I + P FQ SR Y ++ +E D++ F + + Y+++ RLD WY LR+ K I+D+
Sbjct: 35 KVEEAVECYQRAANMFKMAKKWPSAGAAFCEAATLHSKAGSRHDAATNYVDAANCYKKTDPNEAANCLVKAIEIYTDMGRFTMAAKHHQSIAEMYESEAVDLELAVHHYEQAADYFRGEESIS-SANKCLLKVAQ------------YAAQLK-NYDKAIQIYEQVASASLESPLLKYSAKEYFFRAALCNLCVDPL------------------------NAQHAIERYQEQYPAFQDSREYKLVKSLIDLLEEQDLEGFTATVTDYDSISRLDPWYTSMLLRIKKQINDN 288
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: A0A553PKF6_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PKF6_TIGCA) HSP 1 Score: 105 bits (262), Expect = 1.970e-21 Identity = 89/319 (27.90%), Postives = 138/319 (43.26%), Query Frame = 1
Query: 175 KAEKWIQQAERA--QRRVYLGPLV--RFKFQDSSNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNN-RNYRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWY----LRVLKTISD 1104
KA +Q AE+ + +LG L + K ++ AG +++ K++ AG + + KL N AA+ + +AA C++K DPQEAA C A++++ RFS AA+ +A + N + +A+ H AADF+R A L A + +K NY A +++QV L LLK++A + F +A LC C L + + I + P F SR + S +E DV+ F + + AY++V RLD WY LRV K I D
Sbjct: 7 KANALVQDAEKKLNSSKSFLGGLFGGQNKVDEALEMYNRAGNLYKMGKKWSSAGNTFVTVAQHHVKLGNKHDAATSYVDAANCYKKSDPQEAANCLSKAVDIYTDMGRFSIAAKHHQTIAEIYENEIADLEKAMQHFEMAADFFRGEESNSSANKNMLKVAQYAAK--------------LENYERAIQIYEQVASSALESSLLKYSAKEYFFRASLCHLCVDAL------------------------NAQHAIQKYEEQYPAFADSREAKLIKALSSHLEEQDVEAFTNEVKAYDSVSRLDQWYTTILLRVKKQIPD 287
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: D3PH46_LEPSM (Soluble NSF attachment protein n=5 Tax=Caligidae TaxID=72034 RepID=D3PH46_LEPSM) HSP 1 Score: 100 bits (248), Expect = 1.380e-19 Identity = 73/280 (26.07%), Postives = 129/280 (46.07%), Query Frame = 1
Query: 280 AGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNN-RNYRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWYLRVLKTISDHVHT 1116
AG F++ K++ +AG + K+ N AA+ +AA C++K DPQEAA C A+ ++ RFS AA+ +A + N+ + +A+ H+ +AAD +R + + +A++C+LK + +A L NY A +++QV + L LLK++A + F +A LC C L + + I + P F SR ++ ++ D+D F + Y+++ RL+AWY +L + + T
Sbjct: 46 AGNAFKMGKKWPEAGNTFVTLAGHHTKMGNKHDAATNFVDAANCYKKTDPQEAANCLNKAVVIYTDMGRFSIAAKHLQNIAEIYENDVADLERAMQHYEQAADCFRIDES-NSSANKCMLKVAQ------------YAAQLE-NYERAIRIYEQVAKSALESSLLKYSAKEYFFRASLCHLCVDAL------------------------NAQHAIQRYEEQYPAFADSRESKLIKSLLVHIEDQDIDAFTEEIKKYDSISRLEAWYTTLLLRVKKSLDT 287
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: A0A482W5I5_9CUCU (SNAP domain containing protein n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482W5I5_9CUCU) HSP 1 Score: 99.0 bits (245), Expect = 3.410e-19 Identity = 71/282 (25.18%), Postives = 127/282 (45.04%), Query Frame = 1
Query: 253 QDSSNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNRNYRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWYLRVLKTI 1098
+D+ AG F++AK + AG A+K G L + NN AA + A+ C +K D A LSAI ++ RF+ AA+L +A + N +A+ H +AAD+++ C+ +A RCLLK + + +Y +A ++Q++ L +L++ A ++ KAVLC C I + K + + + P F+ +R + F +++ ++ D + F + Y++ RLD W+ ++L I
Sbjct: 37 EDAIECYHRAGNLFKLAKNWLQAGSAFKIAGDLNLEQNNRTEAADNYVLASKCLEKYDVNGAINFLLSAIQIYTDLGRFTMAAKLHNNIADIYEQNLELDKAVQHFEQAADYFKVEECYT-SAKRCLLKVAQ------------YVSSEFQDYSKAINIYQEIAFYDLKSPILQYGAKESLFKAVLCHLCID------------------------ILNAKHALDSYVRKYPAFKIAREFEFLKNIIEHVEDSDEEAFIKTIKEYDDFSRLDTWHTKILLKI 281
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: A0A1V9XNK3_9ACAR (Soluble NSF attachment protein-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XNK3_9ACAR) HSP 1 Score: 97.1 bits (240), Expect = 1.520e-18 Identity = 76/274 (27.74%), Postives = 126/274 (45.99%), Query Frame = 1
Query: 280 AGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNRN-YRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKAS---PVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWYLRVL 1089
AG F++AK + AG A+++ L K N A S +AA C++ +P +A C A+ ++ RF+ AA+ +A L + N +A+ H+ AAD+Y++ + AA++CLL+ A +A L Y A +++QV + LLK++A + F +A LC I+ + AT AL K P F SR Y F +V + ++ D+D F + + Y+++ RLD WY +L
Sbjct: 45 AGNTFKMAKNWLQAGNAFREXXXLHRKSGNRHEAGSALVDAAKCYKSCEPTQAVECLKKAVEIYTDMGRFTMAAKHHVTIAELYESELNDIEKAVGHYEIAADYYKSEES-NSAANKCLLQV------------AKYAAQLE-KYERAIEIYEQVASSCVDSSLLKYSAKEYFFRATLC--------------------------HLAIDVLNATH-ALNKYDEMYPSFADSREYKFGKSLVKAVEDEDIDAFTAAVTEYDSISRLDKWYTSIL 277
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: Q86F02_SCHJA (Alpha-soluble NSF attachment protein n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=Q86F02_SCHJA) HSP 1 Score: 94.7 bits (234), Expect = 8.960e-18 Identity = 78/282 (27.66%), Postives = 127/282 (45.04%), Query Frame = 1
Query: 274 ELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNR-NYRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLD----AWYLRVLKTISD 1104
E AG CF++A + +AG A+ + L + AA+ + +A++ F+K+DP +A C AI ++ RF+ AA+ VA + N + QAI H+ +AAD+Y+ +A +C L + S G YV+AA LF++VG+ + LLKF+ AV+C C IN KA + + P F GSR + + + +V+ F + Y+++ RLD + L++ KTISD
Sbjct: 41 EKAGNCFKMAHNWTEAGNAFLKAASLSLNQGSKHDAATRYVDASVAFKKEDPAKAIECLTEAIKIYTDMGRFTIAAKHHLTVAQIYEENLVDIEQAIRHYEQAADYYKGEDS-SSSAMKCQLSVAKLSARLG-------------QYVKAANLFEEVGKASSGNSLLKFSTKGHLFNAVICHFCVD-----------------------LINGQKA-LKTYEECYPDFAGSRECGLMKKLSEALEHENVEAFTMAVKEYDSITRLDPLITSLMLKLKKTISD 284
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: N6U287_DENPD (Uncharacterized protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6U287_DENPD) HSP 1 Score: 94.4 bits (233), Expect = 1.210e-17 Identity = 76/279 (27.24%), Postives = 122/279 (43.73%), Query Frame = 1
Query: 256 DSSNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNRNYRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIV-ALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWYLRVL 1089
++ Y AG F++AK + AG+A+ L K + A + EAA CF+K D A CYL A+ ++ + RF TAA+L +A LM + R+ AI H+ +AA+ A++C+LK A L G Y +A +FQ + L LL++NA + FL+A +C C + PE + TI+ + P F+ SR ++ DVD +A + Y+ +L W++ +L
Sbjct: 38 EAIEYYTRAGNLFKMAKNWLQAGLAFTDAADLHSKTEDTLEGAINYSEAANCFRKCDYSMAIECYLKALKMYSEMGRFLTAAKLHQTIAELMEDERDLAGAIRHYEQAAELLHEEN-HHSIANKCILKV-------------AEFAALEGKYQKAIKMFQDIACFDLSSSLLQYNAKEYFLRAAICHLC---------------NDPE----------IVGTIINRYIEMHPAFKDSRECHLILCLLDCIDLHDVDGYAHAIRTYDATSKLTMWHVTML 277
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: A0A8H7PEM3_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PEM3_9FUNG) HSP 1 Score: 92.4 bits (228), Expect = 5.280e-17 Identity = 84/315 (26.67%), Postives = 140/315 (44.44%), Query Frame = 1
Query: 172 EKAEKWIQQAERAQRRVYLGPLVRF----KFQDSSNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHE-AALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNR-NYRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWYLRVLKTI 1098
++A+++IQQAE+ L F K++D++ AG F++AKR+ DAG + + L +K+ + AS +E A+ C++K P+ A L AIN+ + F AA+ EVA + N+ + A+ + AA Y A+ +C LKA AH + G Y A F+ V + + L K++ + FLKA LC C +G V + L + + S F+ +R Y F D++ + +VD F ++YA++ +LD W +L I
Sbjct: 4 QQAQEYIQQAEKK-----LNGWGWFGGGNKYEDAAELYAKAGNTFKLAKRWIDAGDTFMKAAELHKKVADSRFEASRDYENASKCYKKSKPEAAVGALLEAINIDKEMANFRIAAKHHSEVAEIYENDLVDLPAALDNWDNAAQLYLADDS-PAMVSKCTLKA-------------AHLAAVLGQYDNAIEKFESVAAASVDNQLTKWSVKEYFLKAGLCQLC-TGDTIRVQQALEKYCNMDVS----------------------FESTREYEFLQDILECVENDEVDLFTQKVYAFDEKTKLDNWKTSILLKI 276
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Match: A0A834IVM5_RHYFE (Uncharacterized protein n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834IVM5_RHYFE) HSP 1 Score: 92.0 bits (227), Expect = 7.390e-17 Identity = 76/308 (24.68%), Postives = 138/308 (44.81%), Query Frame = 1
Query: 184 KWIQQAERAQRRVYLGPLVRFKF------QDSSNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFHHEAALCFQKDDPQEAAACYLSAINLFCQTQRFSTAARLECEVAGLMHNNRNYRQAIVHHIKAADFYRANTCFDEAADRCLLKASHPSKHCGLHASAAHALGLAGNYVEAATLFQQVGRRMLVDDLLKFNAPDTFLKAVLCLQCASGLPNAVPKGLHRKSGPEASTPQPTINSVKATIVALGKASPVFQGSRAYMFATDMVSSEKEGDVDFFASRLYAYNNVCRLDAWYLRVL 1089
K IQ +A +++ G ++ F +++ Y AG F++AK + AG+A+ L ++ + AA + +A CF+K D +A C++ +I L+ + RF TAA+L VA M + R+ +AIVH+ +AA+ +R A++C+ K + S + G Y +A +FQ + L LL++NA + +A +C C P I V+ I P F+ SR ++ + DV+ +A+ + Y+ +L+ W++ +L
Sbjct: 8 KAIQLRNQAAKKLNPGGFFKYLFGNGNKPEEAIEYYTRAGNLFKMAKNWIQAGIAFSDAADLNIQMEDQLEAAINYSDAGNCFKKCDLPKALECFMKSIKLYSEMGRFLTAAKLHQAVAEAMEDERDICRAIVHYEQAAELFRDEN-HHTMANKCMQKVAEFS-------------AMEGKYQKAIKIFQDIACFDLSSSLLQYNAKEYLFRAAICHLCND----------------------PDI--VETIINRYNDMCPEFKDSRECQLILCLLDCIEARDVESYANSIRIYDASSKLNMWHVTML 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig878.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig878.7.2 >prot_P-littoralis_Contig878.7.2 ID=prot_P-littoralis_Contig878.7.2|Name=mRNA_P-littoralis_Contig878.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=643bp MTTINIIVIYHWRVPSFRLSTCAVGPWEREALTAKNEAKPGGYLVAKMADback to top mRNA from alignment at P-littoralis_Contig878:31920..38343- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig878.7.2 ID=mRNA_P-littoralis_Contig878.7.2|Name=mRNA_P-littoralis_Contig878.7.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6424bp|location=Sequence derived from alignment at P-littoralis_Contig878:31920..38343- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig878:31920..38343- >mRNA_P-littoralis_Contig878.7.2 ID=mRNA_P-littoralis_Contig878.7.2|Name=mRNA_P-littoralis_Contig878.7.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1929bp|location=Sequence derived from alignment at P-littoralis_Contig878:31920..38343- (Pylaiella littoralis U1_48)back to top |