mRNA_P-littoralis_Contig877.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5JQG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG9_9PHAE) HSP 1 Score: 103 bits (258), Expect = 1.530e-24 Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
L F + G+ GEE MR YFA WSPYR+R+VHVE IGK E+YRP S L+G++GTR MYHFAGAN P +T+T G +D
Sbjct: 217 FLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEIIGKKEVYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGRED 297
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5JFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY7_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.610e-24 Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
L F + G+ GEE MR YFA WSPY +R+VHVE IGK EIYRP S L+G++GTR MYHFAGAN P +T+T G +D
Sbjct: 143 FLRSFFREKAGSEGEEGMRRYFAKWSPYPMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPEWDGSTSTKGRED 223
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.720e-24 Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQ 304
L F + G+ GEE MR YFA WSPYR+R+VH E IGK EIYRP S L+G++GTR MYHFAGAN P +TTT+GL+
Sbjct: 695 FLRSFFEEKAGSEGEEGMRRYFAKWSPYRMRRVHFEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTTTEGLE 774
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5J952_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J952_9PHAE) HSP 1 Score: 102 bits (253), Expect = 3.660e-24 Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
L F + G+ GEE MR YFA WSPYR+R+VHVE IGK E+YRP S L G +GTR MYHFAGAN P +TTT+G D
Sbjct: 201 FLRSFFREKAGSEGEEGMRKYFAKWSPYRMRRVHVEFIGKKEMYRPNSVLAGTEGTRDMYHFAGANTPKWDGSTTTEGRVD 281
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 104 bits (259), Expect = 7.980e-24 Identity = 52/86 (60.47%), Postives = 61/86 (70.93%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQ-DIELV 319
L F + G+ G E MR YFA WSPYR+R+VHVE IGK EIYRP S L GI+GTR MYHFAGAN P +TTT+GL+ D +LV
Sbjct: 489 FLRSFFREKAGSEGGEGMRKYFAKWSPYRMRRVHVECIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLENDCKLV 574
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5L293_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L293_9PHAE) HSP 1 Score: 102 bits (255), Expect = 2.780e-23 Identity = 47/81 (58.02%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
L F + G+ GEE MR YFA WSPYR+R+VHVE I K EIYRP S L+G++GTR MYHFAGAN P +T+T G +D
Sbjct: 523 FLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEFISKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGRED 603
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5KTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ4_9PHAE) HSP 1 Score: 101 bits (251), Expect = 8.950e-23 Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 2
Query: 62 GGLLAEIFPPEGGNGEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
GG+ GEE R YFA WSPYR+R+VHVE IGK EIYRP S L+G++GTR MYH AGAN P +T+T G +D
Sbjct: 296 GGVAKNAMKRRESEGEESTRKYFAKWSPYRMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHCAGANTPKRDGSTSTKGRED 377
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5JLE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE6_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 3.280e-22 Identity = 45/71 (63.38%), Postives = 52/71 (73.24%), Query Frame = 2
Query: 95 GGNGEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
G GEE MR YFA WSPYR+R+VHVE IG EI RP S L G++GT MYHFAGAN P +TTT+GL+D
Sbjct: 238 GSEGEEGMRKYFAKWSPYRMRRVHVEFIGNKEISRPNSVLAGLEGTLDMYHFAGANNPKWDGSTTTEGLED 308
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5L7F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F4_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 1.220e-21 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
L F + G+ GEE MR +FA WSPYR+R+VHVE +GK EIYRP S L+G++GTR MYH AG N P +T+T G D
Sbjct: 249 FLRSFFREKAGSEGEEGMRRFFARWSPYRMRRVHVEFMGKKEIYRPNSILEGVEGTREMYHLAGPNTPEWDGSTSTKGRGD 329
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Match: A0A6H5KLE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE4_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.180e-21 Identity = 48/81 (59.26%), Postives = 55/81 (67.90%), Query Frame = 2
Query: 68 LLAEIFPPEGGN-GEEDMRTYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYHFAGANIPSHQAATTTDGLQD 307
L F + G+ GEE MR YFA WSPYR+R+V VE IGK EIYR S L GI+GTR MYHFAGAN P TTT+G +D
Sbjct: 9 FLRSFFREKAGSEGEEGMR-YFAKWSPYRMRRVQVEFIGKKEIYRLNSVLAGIEGTRDMYHFAGANTPKWDGFTTTEGRED 88 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig877.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig877.9.1 >prot_P-littoralis_Contig877.9.1 ID=prot_P-littoralis_Contig877.9.1|Name=mRNA_P-littoralis_Contig877.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=71bp MKNHERFGKRIVGANKVVDFLRKFFRQKGATVKRTCGRTSRHGLRTASARback to top mRNA from alignment at P-littoralis_Contig877:14018..14337+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig877.9.1 ID=mRNA_P-littoralis_Contig877.9.1|Name=mRNA_P-littoralis_Contig877.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=320bp|location=Sequence derived from alignment at P-littoralis_Contig877:14018..14337+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig877:14018..14337+ >mRNA_P-littoralis_Contig877.9.1 ID=mRNA_P-littoralis_Contig877.9.1|Name=mRNA_P-littoralis_Contig877.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=213bp|location=Sequence derived from alignment at P-littoralis_Contig877:14018..14337+ (Pylaiella littoralis U1_48)back to top |