mRNA_P-littoralis_Contig876.35.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 325 bits (833), Expect = 2.470e-106 Identity = 155/256 (60.55%), Postives = 190/256 (74.22%), Query Frame = 1
Query: 13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 780
+VLA L IL RGN F D+ MS IS T TFH F + FA+E Y +H+ LPT G+ Q +VM YD LGF+GA GSTDVTHI W CPY+ A+ YTGKEG+ T+A+Q VDHT R+LA T GF GS NDK+II YD A+TKIREDP+Y EKE+T+++ G P+Q KG Y +VDNGY+KW LIPPSK+ ++ +SK LESVRKDVECFFGI+KGRFRILKL I + EDI+N+FFTCC LHNMLH++D E
Sbjct: 158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPT-GDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSE 412
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 310 bits (795), Expect = 1.340e-101 Identity = 153/253 (60.47%), Postives = 185/253 (73.12%), Query Frame = 1
Query: 13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDG 771
QVLA L IL RGN F D+ MS IS T+ TFH F K FA E Y ++V+LPT GED +VM YD +GF GA+GSTDVTHI W CPY+ A+ YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VDNGY+KW LIPPSK ++ +SK LES RKDVEC+FGILKGRFRI KL I F E I+N+FFTCC LHNMLH+FD
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 309 bits (792), Expect = 5.810e-100 Identity = 152/255 (59.61%), Postives = 186/255 (72.94%), Query Frame = 1
Query: 7 DCQVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDG 771
+ +VLA L IL RGN F D+ MS IS T+ TFH F K FA E Y ++V+LPT GED +VM YD +GF GA+GSTDVTHI W CPY+ A+ YTGKEG T+AFQ VDH+GR+LA T+GF G+ NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VDNGY+KW LIPPSK ++ +SK LES RKDVEC+FGILKGRFRI KL I F E I+N+FFTCC LHNMLH+FD
Sbjct: 172 ELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 288 bits (736), Expect = 2.850e-92 Identity = 148/285 (51.93%), Postives = 188/285 (65.96%), Query Frame = 1
Query: 13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYK----------------------------EKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 780
+VLA L ILGRGN F + QMS +S T+Q FH F + FA+E Y + +HLPT + D VM+ YD LGFTGA+GS DVTHI W+ CPY+ A+ YTGKEGF TIA+Q VDH GR +A T+GF GS NDKTI+ +D A+ KI D Y EK + ++++ G KG Y +VDNGY+KW+ILI PSK+ ++ ++ +SK LESVRKDVECFFGILKGRFRILKL + +QS E I+N+FFTC LHNMLH FDG+D+
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQ 369
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 285 bits (730), Expect = 5.440e-92 Identity = 136/257 (52.92%), Postives = 183/257 (71.21%), Query Frame = 1
Query: 13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 780
+VLA L ILGRGN F + Q+S +S T+Q FH F K FA+E Y +H++LP+ + D VM+ YD LGF+GA+GS DVTHI W+ CPY+ A+ YTGKEG T+ +Q V+H GR +A T+GF S NDKT + +DA + KIR D Y EK + ++++ G KG Y +VDNGY+KW+IL+ P+K+ ++ +I +SK LESVRKDVECFFGILKG FRI K+ + + E I+N+FFTCC LHNMLH FDG+D+
Sbjct: 98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQ 354
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 282 bits (722), Expect = 6.010e-90 Identity = 139/255 (54.51%), Postives = 178/255 (69.80%), Query Frame = 1
Query: 13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGL 774
+VLA L ILGRGN F + +S +S PT+Q FH F + FA E Y +H+ LP+ + D+VM Y+ LGF GA+GSTDVTHI W+ CPY+ + YTGKEG T+ +Q V+H GR+LA T+GF GS NDKTII D A+ +IR D Y EK +T+ K G KG Y IVDNGY+KW +LI PSK+ ++ ++ +SK LESVRKDVECFFGILK RFRILKL + +Q E ++ +FFTCC LHNMLH DG+
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 381
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 268 bits (684), Expect = 2.190e-86 Identity = 125/213 (58.69%), Postives = 158/213 (74.18%), Query Frame = 1
Query: 145 YHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 780
Y +H+HLPT + D V+ YD LGFTGA+GS DVTHI W+ CPY+ A+ YTGKEGF TI +Q VDH GR +A T+GF GS NDKT + +DAA+ KIR D Y EK + ++++ G KG Y +VDNGY+KW+ILI PSK+ ++ ++ +SK LESVRKDVECFFGILKGR RIL L + FQS E I+N+FFTCC LHNMLH FDG+D+
Sbjct: 2 YDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQ 214
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 268 bits (685), Expect = 5.040e-86 Identity = 136/257 (52.92%), Postives = 174/257 (67.70%), Query Frame = 1
Query: 13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 780
QVLA L ILG+GN F + QMS +S T+Q FH F +LFA+E Y +H+HLP + VM+ YD LG CPY+ A+ YTGK+ F TIA+Q VDH R +A T+GF GS NDKTI+ +DAA+ KIR D Y EK + L+++ G KG Y + DNGY+KW+ILI PSK+ ++ ++ +SK LESVRKDVECFFGILKGRFRILKL + +QS E I+N+FFTCC LHNMLH FDG+D+
Sbjct: 20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQ 259
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 249 bits (637), Expect = 3.030e-78 Identity = 126/248 (50.81%), Postives = 165/248 (66.53%), Query Frame = 1
Query: 34 ILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLD 777
+LG+GN F+D+ Q+S +S+ Q TFH F + FA E + +H++LPT G D+VM + LG+TGA GSTDVTHI W CP++ + +TGKEGF TIA+ VDH GR LA T GF G+ NDKTII YD+ + KIR Y E+EY L +G R+G + IVDNGY++W LI PSK+ + + +S+ LESVRKDV CF RILKL + + E ++N+FFTCC LHNMLH FDGLD
Sbjct: 43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT-GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLD 281
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Match: A0A6H5KZ66_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ66_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.990e-77 Identity = 119/170 (70.00%), Postives = 134/170 (78.82%), Query Frame = 1
Query: 271 CPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDE 780
CPYS A+ YTGKEGF +IA+QAIVDHTGR+LA TKGF G+MNDKTII YD A+ IR DPVY EK TLFD++G PF+RKGNYSIVDNGYNK TD+E +WSKA ESVRKDVECF GIL GRF+ILKLGI FQ I+N+F TCCTLHNMLHAFDGL+E
Sbjct: 21 CPYSRARQYTGKEGFPSIAYQAIVDHTGRVLAVTKGFPGAMNDKTIIRYDTAVAMIRRDPVYTEKVNTLFDENGRPFERKGNYSIVDNGYNK------------TDMESKWSKAQESVRKDVECF-GILMGRFKILKLGIFFQDKNVIDNLFVTCCTLHNMLHAFDGLEE 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig876.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig876.35.1 >prot_P-littoralis_Contig876.35.1 ID=prot_P-littoralis_Contig876.35.1|Name=mRNA_P-littoralis_Contig876.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp FSDCQVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHback to top mRNA from alignment at P-littoralis_Contig876:78074..80099- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig876.35.1 ID=mRNA_P-littoralis_Contig876.35.1|Name=mRNA_P-littoralis_Contig876.35.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2026bp|location=Sequence derived from alignment at P-littoralis_Contig876:78074..80099- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig876:78074..80099- >mRNA_P-littoralis_Contig876.35.1 ID=mRNA_P-littoralis_Contig876.35.1|Name=mRNA_P-littoralis_Contig876.35.1|organism=Pylaiella littoralis U1_48|type=CDS|length=780bp|location=Sequence derived from alignment at P-littoralis_Contig876:78074..80099- (Pylaiella littoralis U1_48)back to top |