mRNA_P-littoralis_Contig874.32.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig874.32.4
Unique NamemRNA_P-littoralis_Contig874.32.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: D7FIB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB9_ECTSI)

HSP 1 Score: 520 bits (1339), Expect = 8.230e-179
Identity = 273/383 (71.28%), Postives = 309/383 (80.68%), Query Frame = 2
Query:  170 LRSRTGLVIAFASSAATVARAFCASAASSSPTEANGARTRAQDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRAHLPYD 1318
            L SRT LV A ASS ATV RAFCASA +SSP E +GART+A+DWDA+RYS NAGFVPELG H+LD+LAPR GERILDVGCGDGVLTAEIK+RGC+VVGIDFAPDM+AAA  + V+AYVMDASA++A  LL++L++ D  D+ S+       P+PP++   T  E +PA                PS PP  E  R +    +   AFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPL VDPWYFPTP EYRRLLEAAGF+VD+VWLVPRPT+LPAGTGMRGWLSTFT+AFLNAIPE+S S    T+ NGLT+T+  V+DEALAALQPALRDKDG WTADYVRLRFRAHLP+D
Sbjct:   12 LGSRT-LVFALASSVATVTRAFCASAGASSPMEVHGARTKAEDWDAERYSTNAGFVPELGKHLLDLLAPRDGERILDVGCGDGVLTAEIKARGCRVVGIDFAPDMVAAAARKDVEAYVMDASAINAQFLLAKLSAHDHNDNCSSA------PSPPSQT--TATEGDPAA---------------PSPPPHREGNRAEGG--EAPVAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLAVDPWYFPTPREYRRLLEAAGFIVDDVWLVPRPTVLPAGTGMRGWLSTFTKAFLNAIPEESSSNRGTTNENGLTQTKATVVDEALAALQPALRDKDGFWTADYVRLRFRAHLPHD 368          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: A0A2V6NZP2_9BACT (SAM-dependent methyltransferase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6NZP2_9BACT)

HSP 1 Score: 248 bits (632), Expect = 1.860e-74
Identity = 151/340 (44.41%), Postives = 173/340 (50.88%), Query Frame = 2
Query:  293 QDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRAHLP 1312
            Q WDADRY+ NAGFV  LG  VL +LAPR GERILD+ CGDG LT ++ + G  VVG+D  PDM+AAA  RG+DA VM A          RL                                                                    DG   FDAVF+NAALHW++ P  VI   +R LRPGGRFVGE GGHGN AAV  A+ A L RRGVD +   PWYFPTP EYR  LEAAGF VD + LVPRPT LP  TGM GWL TFT +F      +   +                +DE +  L+P L D  G WTADYVRLRF A LP
Sbjct:    8 QTWDADRYARNAGFVAGLGSAVLALLAPRPGERILDLACGDGTLTEKLVAAGAVVVGVDAGPDMVAAARRRGLDARVMSAE---------RLTF------------------------------------------------------------------DG--EFDAVFSNAALHWMKQPDLVIAKVRRALRPGGRFVGELGGHGNTAAVLTALIAVLARRGVDGVARSPWYFPTPGEYRERLEAAGFAVDSIELVPRPTPLP--TGMAGWLETFTDSFFKPFASEERRK---------------ALDEVVDLLRPTLCDSRGNWTADYVRLRFAARLP 253          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: A0A192IM61_9HYPH (Trans-aconitate methyltransferase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IM61_9HYPH)

HSP 1 Score: 247 bits (630), Expect = 3.560e-74
Identity = 144/340 (42.35%), Postives = 175/340 (51.47%), Query Frame = 2
Query:  293 QDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRAHLP 1312
            QDW +DRY  NAGFVP LGM V+++L P+ GERILD+GCGDG LT ++   GC+VVG+D   DMI  A E+G+DA+VMD  A++                                    +AE                                          FDAVF+NAALHW+  P  VI G KR L+PGGRFVGEFGGH N+AA + AM A L  RG+D     PWYFPTP EY  LL A GF V    L+PRPT LP   G  GW+ TF +AF  A+P D  +E                  EA+  L+P+L D +G WTADYVRLRF A LP
Sbjct:    6 QDWQSDRYQKNAGFVPVLGMPVVELLRPQSGERILDLGCGDGYLTEKLVEMGCEVVGVDAGEDMIRVAREKGLDAHVMDGHALN-----------------------------------FEAE------------------------------------------FDAVFSNAALHWMLRPAEVIAGVKRALKPGGRFVGEFGGHTNVAACKTAMIAVLNARGLDGASFSPWYFPTPEEYGSLLTAQGFEVHTAELIPRPTPLPTDVG--GWMDTFGEAFFKALPADQRAEARA---------------EAVELLRPSLCDSEGRWTADYVRLRFSASLP 251          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: A0A1X7PQC3_AZOLI (Ubiquinone/menaquinone biosynthesis C-methylase UbiE n=5 Tax=Azospirillum TaxID=191 RepID=A0A1X7PQC3_AZOLI)

HSP 1 Score: 244 bits (624), Expect = 2.740e-73
Identity = 144/340 (42.35%), Postives = 179/340 (52.65%), Query Frame = 2
Query:  284 TRAQDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRA 1303
            T AQ W+A  Y  +AGFVPELGM V+++L PR GERILD+GCG+G LT  + + GC VVG D +P+ +A+A  RG+DA V+D  A+                                   P  AE                                          FDAVF+NAALHW+  P  V+ G  R L+PGGRFVGEFGG GN+  +  A+ AAL RRG+D    +PWYFPTP EYR  LEAAGF V  + L+PRPT LP  T M GWL+TF Q+FLN + E   +E P             ++ E L A+ P LRD +G WTADYVRLRF A
Sbjct:    3 TTAQRWEAGGYKHHAGFVPELGMPVVELLDPRPGERILDLGCGEGTLTERLAALGCVVVGADSSPEFVASAKARGLDARVVDGHAL-----------------------------------PFAAE------------------------------------------FDAVFSNAALHWMTRPDAVVAGVARALKPGGRFVGEFGGAGNVGRIVTALEAALDRRGLDGRAANPWYFPTPEEYREKLEAAGFAVRSIALIPRPTPLP--TDMAGWLATFAQSFLNRVSE---AERP------------ALVAEVLDAVAPELRDSEGRWTADYVRLRFAA 248          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: UPI00047DDDBE (methyltransferase domain-containing protein n=1 Tax=Fodinicurvata fenggangensis TaxID=1121830 RepID=UPI00047DDDBE)

HSP 1 Score: 241 bits (616), Expect = 4.300e-72
Identity = 141/339 (41.59%), Postives = 176/339 (51.92%), Query Frame = 2
Query:  293 QDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDAS--AMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRA 1303
            QDW+A+RY  +AGFV  LG  V+++LAPR GERILD+GCGDG LT  I + G +V+G D APDM+AA+  RG+DA +MD    A DAP                                                                               FDAVFTNAALHW+  P  V++G  R L+PGGRFVGEFGGHGN+AA+R A+H AL RR  DPL + PWYFP+P  Y R LE  GF V+E++  PRPT LP+   +  WL  F QAFL    E+  SE               +++E    L+P L D++G WTADYVRLRF A
Sbjct:    7 QDWNAERYQRDAGFVARLGQGVVELLAPRPGERILDLGCGDGTLTEVIAASGAEVIGSDSAPDMVAASQGRGLDARLMDGHELAFDAP-------------------------------------------------------------------------------FDAVFTNAALHWMTQPDRVLDGVTRALKPGGRFVGEFGGHGNVAAIRTALHEALSRRQQDPLALSPWYFPSPDAYARRLENHGFRVEEIYSFPRPTPLPSH--LPAWLEIFAQAFLAPFSENERSE---------------ILEEVTDRLRPILCDEEGKWTADYVRLRFAA 249          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: UPI001AE2DB73 (methyltransferase domain-containing protein n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE2DB73)

HSP 1 Score: 239 bits (610), Expect = 2.810e-71
Identity = 140/337 (41.54%), Postives = 175/337 (51.93%), Query Frame = 2
Query:  293 QDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRA 1303
            Q W++D Y  +AGFVPELGM V+D+LAPR GERILD+GCG+G LT  + + GC VVG D +P+ +A A  RG+DA V DA  +                  +N+S                                                             DAVF+NAALHW+  P  VI G KR L+PGGRFVGEFGG GN+  +  A+  AL + G+D    +PWYFPTP EYR  LEAAGF V  + L+PRPT LP  T M GWL TF Q+FLN +P+   ++ P             ++ E +  L PALR  DG WTADYVRLRF A
Sbjct:    4 QRWESDGYKRHAGFVPELGMPVVDLLAPRPGERILDLGCGEGTLTERLAAVGCDVVGADASPEFVATAKARGLDARVADAHDLR----------------FANES-------------------------------------------------------------DAVFSNAALHWMTRPDAVIAGVKRALKPGGRFVGEFGGAGNVGRIVAALTRALDKHGIDGTAANPWYFPTPEEYRGKLEAAGFTVASIALIPRPTPLP--TDMAGWLGTFAQSFLNRVPD---ADRP------------ALLAEVMDDLAPALRSADGQWTADYVRLRFAA 246          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: A0A2E7HJX1_9PROT (SAM-dependent methyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7HJX1_9PROT)

HSP 1 Score: 236 bits (603), Expect = 3.230e-70
Identity = 142/343 (41.40%), Postives = 168/343 (48.98%), Query Frame = 2
Query:  284 TRAQDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRAHLP 1312
            ++ Q W+A  Y  NAGFVP LG  VLD+L P+ GERILD+GCG G LT EI   G  V G+D + +M+ AA E G+DA VMDA+ +                                                                   + E            FDAVF+NA LHWVR    VI G  R L+PGGRFVGEFGGHGN+AAV  A+ A L  RGVD   V PW++PTP  Y R LEAAGF VD + L+PRPT LP  TGM GWL TF   F  A+PE                     ++E L  L  +L D  G WTADYVRLRF A LP
Sbjct:    2 SQGQTWNAQGYQTNAGFVPTLGRPVLDLLDPKEGERILDLGCGHGTLTKEIAETGAVVSGVDSSSEMVTAACELGIDASVMDAATL-----------------------------------------------------------------TFDTE------------FDAVFSNAVLHWVRDVDAVIAGVARALKPGGRFVGEFGGHGNVAAVVTALTAVLKTRGVDAAGVIPWFYPTPENYSRRLEAAGFTVDSIELIPRPTPLP--TGMAGWLETFAGIFFAALPEAD---------------RATALEETLDLLSHSLCDDKGRWTADYVRLRFAARLP 250          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: UPI001A965A88 (methyltransferase domain-containing protein n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A965A88)

HSP 1 Score: 236 bits (602), Expect = 5.850e-70
Identity = 143/351 (40.74%), Postives = 175/351 (49.86%), Query Frame = 2
Query:  263 TEANGARTRAQDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRAHLPY 1315
            T+ +G     Q W+A  Y  +AGFVPELGM VL++LAP+ GERILD+GCGDG LT  + + G  V G D +PD++AAA  RG+D  +MD  A                  +S D+                                                            FDAVF+NAALHW++ P TVI G  R L+PGGRFVGEFGG GN+  +  A+  AL RRG+D    +PWYFPT  EYR  LEAAGF V  + L+PRPT LP  T M GWL TF Q+FLN + E                    ++ E L  L P LRD  G WT DYVRLRF A  PY
Sbjct:    2 TDDSGGNAAGQRWEAAGYRHHAGFVPELGMPVLELLAPKPGERILDLGCGDGTLTERLAASGAAVTGADSSPDLLAAARARGLDVRLMDGHA------------------LSFDA-----------------------------------------------------------EFDAVFSNAALHWMKDPDTVIAGVARALKPGGRFVGEFGGAGNVGRIVAALKDALARRGLDGAAANPWYFPTAEEYRGRLEAAGFTVATIHLIPRPTPLP--TDMAGWLGTFAQSFLNPVREAE---------------RAALLAELLDRLAPELRDAGGRWTDDYVRLRFAAVKPY 258          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: A0A537QMR1_9PROT (Class I SAM-dependent methyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QMR1_9PROT)

HSP 1 Score: 233 bits (595), Expect = 5.710e-69
Identity = 140/347 (40.35%), Postives = 173/347 (49.86%), Query Frame = 2
Query:  272 NGARTRAQDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRAHLP 1312
            +G    +Q+W A RY+  A FVP LG  VL++LAP  GERILD+GCGDGVLT +I + G  VV +D APDM+AAA  RG+DA +M                                                     G    + S                          FDAVF+NAALHW+R P  V+ G +R LRPGGRFVGE GGH N AA+ VA+ A L RRG+D   V+PWYFP+   YR  LE AGF V ++ ++PRPT+LP  T +  WL TF  AF  A+PE   S               +   E    L+P L D+ G W ADYVRLRFRA LP
Sbjct:    2 SGPGVSSQEWSARRYAETAHFVPALGAPVLELLAPSAGERILDLGCGDGVLTEKIAAAGATVVAVDAAPDMVAAARARGIDARIMP----------------------------------------------------GQHLTFDS-------------------------EFDAVFSNAALHWMRPPEGVLAGVRRALRPGGRFVGEMGGHNNTAAIIVALGAVLARRGLDAHWVNPWYFPSAGAYRSKLEEAGFAVADIRIIPRPTMLP--TSIEAWLETFAGAFFGALPEQDRS---------------IARAEVANLLRPVLVDETGTWIADYVRLRFRATLP 254          
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Match: UPI0019136C6F (class I SAM-dependent methyltransferase n=3 Tax=Skermanella TaxID=204447 RepID=UPI0019136C6F)

HSP 1 Score: 233 bits (594), Expect = 1.070e-68
Identity = 139/340 (40.88%), Postives = 174/340 (51.18%), Query Frame = 2
Query:  293 QDWDADRYSANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGIDFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSIPPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTHHRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNMAAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVPRPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVIDEALAALQPALRDKDGIWTADYVRLRFRAHLP 1312
            Q W+A  Y+ NA FV +LG+ V+D+LAPR GERILD+GCGDGVLT ++ + GC+VVG+D +P++ AAA  RG+D ++MD  A+                                              GGG                                 FDAVF+NAALHW+  P  VI G    LRPGGRFVGEFGG GN+A +  A+ AAL RRG+D    +PW+FPT  +Y   L AAGF V    L+ RPT LP  TGM GWL+TF  +FL A+PE                    V+DE +AA+ P L   DG W ADYVRLRF A  P
Sbjct:    9 QSWNACGYAENARFVADLGLPVVDLLAPRPGERILDLGCGDGVLTEKLAAAGCRVVGVDASPELTAAARARGIDVHLMDGHALAV--------------------------------------------GGG---------------------------------FDAVFSNAALHWMLRPDDVIAGVWNALRPGGRFVGEFGGAGNVARIVHALEAALGRRGIDGKAANPWFFPTSDDYAARLAAAGFRVRSCELIERPTPLP--TGMAGWLATFAGSFLAAVPEGE---------------RNAVLDEVMAAIAPDLLKSDGTWYADYVRLRFAADRP 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig874.32.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB9_ECTSI8.230e-17971.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2V6NZP2_9BACT1.860e-7444.41SAM-dependent methyltransferase n=1 Tax=Candidatus... [more]
A0A192IM61_9HYPH3.560e-7442.35Trans-aconitate methyltransferase n=2 Tax=Alphapro... [more]
A0A1X7PQC3_AZOLI2.740e-7342.35Ubiquinone/menaquinone biosynthesis C-methylase Ub... [more]
UPI00047DDDBE4.300e-7241.59methyltransferase domain-containing protein n=1 Ta... [more]
UPI001AE2DB732.810e-7141.54methyltransferase domain-containing protein n=1 Ta... [more]
A0A2E7HJX1_9PROT3.230e-7041.40SAM-dependent methyltransferase n=1 Tax=Rhodospiri... [more]
UPI001A965A885.850e-7040.74methyltransferase domain-containing protein n=1 Ta... [more]
A0A537QMR1_9PROT5.710e-6940.35Class I SAM-dependent methyltransferase n=1 Tax=Al... [more]
UPI0019136C6F1.070e-6840.88class I SAM-dependent methyltransferase n=3 Tax=Sk... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig874contigP-littoralis_Contig874:80062..90372 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIB9
PFAMsMethyltransf_11,Methyltransf_25,Methyltransf_31
Model size1852
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464
Exons8
Evalue3.15e-182
EggNOG OGs2AQCE@1|root,2RZIN@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-11_001320.1
DescriptionMethyltransferase domain
Cds size1344
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig874.32.4prot_P-littoralis_Contig874.32.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig874 80078..89880 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791756.2447069-UTR-P-littoralis_Contig874:80061..800771680791756.2447069-UTR-P-littoralis_Contig874:80061..80077Pylaiella littoralis U1_48UTRP-littoralis_Contig874 80062..80077 +
1680791756.3624747-UTR-P-littoralis_Contig874:89880..903721680791756.3624747-UTR-P-littoralis_Contig874:89880..90372Pylaiella littoralis U1_48UTRP-littoralis_Contig874 89881..90372 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791756.2589211-CDS-P-littoralis_Contig874:80077..803291680791756.2589211-CDS-P-littoralis_Contig874:80077..80329Pylaiella littoralis U1_48CDSP-littoralis_Contig874 80078..80329 +
1680791756.271431-CDS-P-littoralis_Contig874:85051..851611680791756.271431-CDS-P-littoralis_Contig874:85051..85161Pylaiella littoralis U1_48CDSP-littoralis_Contig874 85052..85161 +
1680791756.2847774-CDS-P-littoralis_Contig874:86492..866191680791756.2847774-CDS-P-littoralis_Contig874:86492..86619Pylaiella littoralis U1_48CDSP-littoralis_Contig874 86493..86619 +
1680791756.2972825-CDS-P-littoralis_Contig874:87019..873961680791756.2972825-CDS-P-littoralis_Contig874:87019..87396Pylaiella littoralis U1_48CDSP-littoralis_Contig874 87020..87396 +
1680791756.3082213-CDS-P-littoralis_Contig874:87950..880981680791756.3082213-CDS-P-littoralis_Contig874:87950..88098Pylaiella littoralis U1_48CDSP-littoralis_Contig874 87951..88098 +
1680791756.3211753-CDS-P-littoralis_Contig874:88781..889171680791756.3211753-CDS-P-littoralis_Contig874:88781..88917Pylaiella littoralis U1_48CDSP-littoralis_Contig874 88782..88917 +
1680791756.336194-CDS-P-littoralis_Contig874:89631..897831680791756.336194-CDS-P-littoralis_Contig874:89631..89783Pylaiella littoralis U1_48CDSP-littoralis_Contig874 89632..89783 +
1680791756.3493478-CDS-P-littoralis_Contig874:89838..898801680791756.3493478-CDS-P-littoralis_Contig874:89838..89880Pylaiella littoralis U1_48CDSP-littoralis_Contig874 89839..89880 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig874.32.4

>prot_P-littoralis_Contig874.32.4 ID=prot_P-littoralis_Contig874.32.4|Name=mRNA_P-littoralis_Contig874.32.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=448bp
MLLPATTTRYTQTRISTKGLCKDFAACGSRQVVFSSSTPSAQQMHQQSRG
MLRSRTGLVIAFASSAATVARAFCASAASSSPTEANGARTRAQDWDADRY
SANAGFVPELGMHVLDILAPRRGERILDVGCGDGVLTAEIKSRGCKVVGI
DFAPDMIAAAVERGVDAYVMDASAMDAPLLLSRLASGDRVDDISNDSPSI
PPPTPPTRAAPTKAERNPATPGGGVSAPYQSGDSIPSVPPLAENEREKTH
HRDGLPAFDAVFTNAALHWVRAPRTVIEGAKRVLRPGGRFVGEFGGHGNM
AAVRVAMHAALWRRGVDPLDVDPWYFPTPHEYRRLLEAAGFVVDEVWLVP
RPTILPAGTGMRGWLSTFTQAFLNAIPEDSFSENPETDSNGLTKTETVVI
DEALAALQPALRDKDGIWTADYVRLRFRAHLPYDWGQKWWGIRDPNN*
back to top

mRNA from alignment at P-littoralis_Contig874:80062..90372+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig874.32.4 ID=mRNA_P-littoralis_Contig874.32.4|Name=mRNA_P-littoralis_Contig874.32.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=10311bp|location=Sequence derived from alignment at P-littoralis_Contig874:80062..90372+ (Pylaiella littoralis U1_48)
CACGACTGCACCCACTATGCTGTTGCCAGCAACAACCACCCGATACACGC AAACAAGGATTTCGACAAAGGGACTCTGCAAAGACTTTGCAGCCTGCGGC AGCAGGCAGGTCGTCTTCAGCAGCAGTACGCCAAGTGCACAGCAGATGCA TCAACAATCTCGAGGTATGCTGCGGAGCAGGACAGGACTCGTGATCGCCT TCGCCAGCTCTGCCGCCACCGTGGCGAGAGCATTTTGCGCCTCGGCTGCT TCCTCGTCTCCCACAGAGGTACGCGTTTATACATCTCCAGCGGCATGAGA AATGGTACGATGGGTGATGGACGGAGTAAGAAACAGGTGTACCTCTGCAA ACATCAAGTCTTCGATCAATCGTTGCGATGCGTTCCTGGATCAACCACGT GTGATCTTTACAGCAGCTCCACAGACAAGGGAGAGGACCGGCGGGCAAGA GATGATGAGTCATGACGAGCACATCCCGGGCTTCGATCGTACAGCAGCAC TACTGTTTGAATGCCCAGCATCTCCTTGAAATCTGTGTTCTTTATTGTTC CGTGGATATACCTTGTTAGGAAAATGGTACACCCCTGTAGACAACTCGCC AGTTTCTCGATCAGGGCGGAGGTTAGGCCGTTTCTCGTATGATGAGGTTG AAAATGCCGATCGATTTTCCCCTATCGGGCTTTTTACTGCTGCAGATTTT CGACCCGCTGTTCTTACGGTGATTGTTCTCTTCTACCGTTTTTTGGGACT GCGAGCAAAAAAGAAGCAGCGTAGTATGTAGCAGCAGCGAAGAGGGATTT TCTCATGTGAGACCAGCTTATTACACTTTGGCTTTTAATTCTCAAATGAA CGAGGCCACAGCAACGACAAAGCCATTCTCCGTGAGCTGTGTGTATGGTT CTTCTCATGTGATGATCGTTCGAGCCCTGGAGGCGTGGTAGGTTCGCAGC AAAGCTGGTTATCGATGGTCATGTGTGTCAAACAGACGCAAAAAATCATG AGTTGCCGTTGCTCCGCGCAGCCGAGGAGATATTTTTGGCCTCTGGCGCC GGTTTGCTTTCTCATCCACCACTCACTCCCGAACGGATGCAGCCGTAGCA ATGCCAAAGTTATATGCCGTGAGCTGTGTGCATGTCCCTGTCGTCTGGTG ATTATTTTGGTTAGGGCTGCATCGGTTCGTCCGCAATAAGCAGTTTGCTT GTCTCAACCGACGTGTGGAAAACTTCAAGAAAGACAGGTGATACCGATCG GTGCTTCTGTACAACATATATAACAGCCTTCCTCTCTGGTCGTCTACAAC AACATGTGATTGTCACGAGCAAACTTGTTTGCGAGCCTACCGATGCCTCC CGGGCCCAAACAATCACCACACGAGAGGGATCACACACAGAGCTCACGGT AGATGCCGTTGTCGAAGCTGTGGCTGTATTCGTTCGAGAGTAGTGGATGA AAAAGTAAACCGGTGCAATGGGAAAAGGACCGGCTGGGTGGAGCCATGTA ATAATGTGACGGTAATAGCACCTGTGACACCCAGCACGTACTACATGGAC AGCAGCCAAGCAGCAGCAGCAGCAGCAGCAGTACCTTTCCTCCCCTGCTA TTGTTGCTCTCCTTGCTTCGGTAGGTGGCTTGTGTTTGGTATGTGTACAC CGGTGTGTGTGGTGCGTGATGGTGTGAAGGCACCCACAGATGATGATGTG AAGGCACCCACATCAATTTATCCTACCACATCAAGAGAGCAGACCCAAGC ACAACCTTCCCGATCGCAAAACTCGACCGGTTCACCGCGTCGAAAATCCC TCAGATTTCCGAAAGGGTTCTGCTCGAAAATCTGTTGTCGGCAATCTCAG ATCGAAAATATGTTATTTTCGCCTCGCCGCAAGACATGGATTTTTGCTCT TGATCGAGAACAGGGGAAATCGATCGGCATTTTCAACCTATGAGAGACCG CCTTAGGCAACAATCTCACGTGTTGAAAACACGAAAATACCAGTGTATAT TTTCAGAGCGTTTCGAACAACAAACATTTCCGACGTAACTTTTCGAAGCT CTCGCTCTTTCGTGATCGTAATTGAAAAGCAGGTGATTGAACGGAATCTT CCGAAAAAGTATCACCTGTTCTGGGCCCGCTTGAGGGTTGGCATACATCT TGCCCTTTCACCGGTTCGCTCTTTCGTTCATCACTCTCGAACGAATGGAA CCAGAGCAATGCTGAAGCCATGCCTTGCGAGCTGTGTGTTTGTTTCTTAC CCTGCGGCGCTCATCGAAGGCCGTGAGGCATCGATAGGCAAGCGGCAAAA ATCGCAGGCATCGATGACGTGTGAAGAAGAAAAAAGCAATCGATGCGGCA TCATACCAGCAGCTGGCAGTTTCTTCTTTTGTTCCACACGTCATACTATT TGATTCCTGCAAACCTCTGTACTAGCCTTTCGATTCCTCGCGGCTTCAGA TGACCACCGCAGGAGAAGTACCACACGCACAGTTCGAGAGGCATGGCTTT AGCTTTGTGGTGGCCTCACTCGTTCGAGGGCGATGGATAAAACACTCAAC TGGTGTGGAGGCGAGAATACCTGCTGCCGCTGTGTTCGAGAGCCCAGAGC ACAGTTGCCGGTTCTCTTCCGATTCATTTTGTCTCTTTGTCCATCGCTCT CGAAAGAAAACAGCCACAGCAATACCGAAGCCATCGCTCTTGAGCTGTGT GTATCTTGCTTCTGCTGCGATGGCCATCAGAGACTGCGAGGTATCGACGG GCTACCAAAACGAAGTTTGCAGGTCATCGTCGTCGTGAAAGGCTGGCTAG CGTGGGGTGTTCAAACCCCTTGACTGAACAAAAAAGACTTCCAAGTATTT CATAACTCTGTCGGCGTAGAGTTTTTCTGATCATTGGGGGCTATCGGGAA AAATTATTCGAAACAACGACATTGAAAGAGGCTGATTCTGATCACACAAC AATGTTCAAAAAGTCGTTTTTATATCACTTCTTTCAACACTACAGATGTA GACGGAGGCTGAAACTCCAGGCACGTGTCACACGGTGCAGGAGCAGTTGT TAAAGAACGAGCCAACGGTCGGAGAGGTTGTTCGTGATACCCTCCTAGAG AAAGACCTTCCAGCGTTCTTTGGGCCTCCTACAGGAAAACATTGTCGGGA TGAGCATGCAATGGGAGGCCTTAGGCCTTCTCCAAAGCCTGACTTTCCAA CCTGAAAATCCGAGCTGGGGCCGATTGACCGCTAAACCGTTCTCCGATAA AATCGAAAATACCGGGAAGGGATTGGAAGTCAAAGGGGTTGTCAGATGTG TGGCATGCGGTTTTTGCCTGATTTTGAAGCAAGTGCGGTTGATGATGCAA ATCGACAAGAGTGATCGTCAGCACTGGCAGGGTCGCACGTAAACGCACTG CCTGTACCTTCTCGTGTGTGTGTATTTATGCTTAGTGCGGGCTGTGAAGC ACTGCGGCGCAACCTCGTGGCCGCTCGCCCGCGATCTTTTCCTACTTGGA ATTCCTGGTGTTTTGGCTTGGAATCCATGTGTCGACAGATTCCGAGCGAC TCGATTGGAATCCGTCGAACCGGAAAATTTGTTCCATTTCAACCGAGAAC AACTCCTATCAGATGGATTTTTTCCAAGTTGAAATTCCTTTTCCAATAAT TTGTATCAACCTTTTGGGTCTTGAGAATCAAAGCTGCATTATCAGGGGCC ATTACCCGAGCTCCGCTGACACGGGTCCGCAGATCTACCAAAACAGGAGG GTGCCCTGCACGGGGCTTCGTGACTCCTCAGGTCGACTCTTTTTTTGGTT TGTAACTCAGCAGTCTGTAGTATAGCTATCGGCATATTTGATCCATTGCG GTATATAATGTATAAATTTCAGATTGACTTTCAACGGATTCGAAAAGCGG AGTTTGAGCTGTTGTAAAGTTACCGTTAGAGTTACGGTATAGAAGCTGAG CCAAAATATGCAACTGACGGAACGTCTTGTTCCTTAGTGGCCGCCCGAGC CAGCTTCCTACACACCACCGCAGCCCAAGAAATCTACACAGCGTACCGAT GTGGTGTGTGGTTTTCCGTCGCACCCCCAGACAGCAGCAGTAGGCAGCCA GAAACCTCGGGTATCGGTAAGCTTGTGAAGTCGAAGCACAAGGTTTGAGC ATCGAACATGCGGTGTAAAATGATGCAGATCTCGAGAGGTCCCCCTTCCA CCATCGGAGCCTCATGCCATCGCTGTAGTCTTAGTAAAGAAACGGATTTG AGGCGAGTTCAGCCGGTCTTTTTGAATGTTTGTGCAGAACGCCGATGGCG TCGGCTAAAAATCGCAGGGTCAACTTTTGCCATCTTGTCGGGGTGGTCGT GAATTTGGGAAATATGCTGTTGGCACTAAAGCAAGGCCGTGCAGGCTCGC AGGTTCCGTATCGCTCGAGAAACAAGCTCGTCTATACATTTCCCTTTTTT TTTTAGAGTTTTGAGTCAGTTACTCCCAGGCCCAACGCCTCATCAGAATG TCCGATACTTTTCGAAGTACACGTTTTTCAGCCGCTATCAGAGGAGCACT TCATAATCCACGACAATGATGGCTTCTGGCGTAAAGTTTCATGCTGCCCT ACAGGTTTGTTGAGCATTGCCTTTGGCCGCTTATCACGGCATCCCCCCAG TGACTAGTACGACTCGTCAACGCTACAGGCGACATAACCGACCAGACCTA GGCCGTTGGGACACCCACGGTAGACCGAAACCTTTTGTGGCGTACGCTCG ATCAACTGCTTTGAGCCTCTCGGTGGGACTTGCTGTGTACGTATGCCTTT GCTTTGGATTTTGGCTGTGGCAATGGCTAACATTACGAAGTAAAAGCGAT CCAGATTGGTTCGGTTGGCGCCCGAGTCCAATCTCCCACGGAACAAGAAC CTCTCTGGAAAGACCTTGTCTGGTTGCCAGGGAGTTCTTTGTTTTTCTCA TGTTTTTGTCATGATGCTTGTCTCGGCTGTTTTGAGAAAGGCGAACGGCG CCAGGACTAGAGCGCAGGATTGGGACGCTGATCGCTACTCGGCGAACGCC GGCTTCGTGCCAGAGCTGGGAATGCACGTGCTGGACATTTTGGCGCCACG GTGAGTCTCCGTGCGTAGGTACACGGGTGGCCAGGGGTATAGGTTCGGGG GCGTTGGGAGACACCCCTTATCTCCCGAGGTTTGGAGAGTGATCCCAACC GCAGAAAATGATGTTGGCTTGTGCAAACGCAGGTAAGCCGACCCCTTGCA ATGTTGATATTTTCAGGGGGAGACCTTTCTTCGTTGAACAAGAAAGCAAC TGAGGAAAATCTCAAGACAGATAGTCCGTGTGAAAACATTTTTTTATTTT GTCACACACCTCTCGGGATTTGAATTTGAAAAACACCGCTACTCGTCACA GCCCTGCCTCCATGAGAGAAGTATGTGGAGAGTTTTTTTATGTTTCTTCG TTTTTCGTCCCTCGTCTTTTCCATGCTCATGGCGTTTGCCCGGTTTTTTT CTTGTTTCCTGAAAAGTACAAATATTGGGCAAGATAAGGAGAAACGGATT TGAAAGGTGGTTTTGTTCGCTTTAACATGCGATAACCAACCCATTGAATT AAAAAAGAAGTGCGGCATCCGCTTCGTCTCACCGAGACCACGATTTTGTC GTTTTTGTTTCCAGAAAACAAAAATCTCACGAGATATCCTTCATTTTGCT TTTTCGCCGACTCTGGCTCGCATCGCAACTTTCGCTTCAGGTCACATCCG ACACCACGGAACGCCGCGGGAAACGTTCATTATATTTTCAGAAGGCCCCT TTTATTTCGAGACTGCGAAAGTAAACGTATAAGGATATCAACCGTACGAA TTGAGCATTGCTCGACAAATGAAATCGGGCTGAGAAAGCAAGACGAACAA GTGAAATCACCAAATGCACTTCAACCTACAGGGAGCAAGAAGAGGAAAAA GGACGCACGCAGTTTTCCGAAAGGACGCGTGGACGTCCCCGACCGACTTC CATTTCAAAGAACGAAATTCGTGTCGTATGATGAAAAAAGGAAACGGAGC ACACTCGAGCCGAATTCCTCGCCCAGCCGAACTCATGGTGTAGCTGGTCT CCTTCCTTTTCCTCCTGAATGCTTGCCCGATGATCTCAATCGTCGTGAGT TCAGCGAACAAGCGACAGCACTATGAAGAGCGCATGTGTGGGTGTGTGTT TTACTCGCCTCCATCCCCTCTTTCTTTATTTACCCCCGGGGGGTACACAA TTTCACGAATATCAAAGATTCCACCTCCCGGGGAGAAATTGAAGGGAGTT GCGGCACGAATAGATCGGATGACAGCACACAACTGCACTCTCCGTTCTCC ACGAAGCACAGAGTCGGGGATTAAATGCGCATTTCTAATCCCACGTGGAC ACTTTTTTTGTTTGTAATATTTCTCTTAAAGGAGAGGGGAACGCATTCTG GATGTCGGCTGCGGTGATGGTGTCCTTACCGCCGAGATCAAGTCGAGGGG CTGCAAAGTCGTGGGGATAGACTTCGCGCCCGACATGATCGCCGCTGCTG TCGAAAGGGTGAGACTTTCGCCTTTTCGATAGGGTCGCCGTGACAGATAC GTCGTGCTATTTCCGTGCTGTTCTTGCCGTCCGCCGGCATCTGTGGGTTA AAGGTGCTGTCAGGGACCGGTGAAGCTTTTGCATTACTGTCGACATACCC ACCGCCTTCGTAATTCAGTGCGGACAACTTGAGTGTAGTCGCTAGTCTTC AGGAACGCGGCGCTGCTGTAGGGAGCCCTTGTTTGTTGCAGTAGCTCGAT GCGTCTCATGTTAAAACCGGAGCACGCGGTCAGCACCACATCTGCTGGGC ACCCTTTTTTCGGAATTTCCTCTCTAAGTTGCCGTGCCTGATCTCTTACG CGACCTCTTGTCACTCCCACGCGCCTCGGTGCCACAACGTTTGTTTTGTT TACTGGAGGGTGTCGACGCTTACGTGATGGACGCATCGGCCATGGACGCT CCTCTCCTGCTCTCCAGGCTCGCCAGCGGCGACCGTGTCGACGACATCAG CAACGACAGCCCCTCGATTCCGCCACCGACGCCACCAACCAGAGCAGCAC CCACGAAAGCGGAACGAAACCCTGCCACACCCGGAGGGGGCGTTTCCGCC CCCTACCAATCCGGGGACAGTATCCCCTCCGTCCCCCCCCTCGCTGAGAA CGAAAGAGAGAAAACGCACCACAGAGATGGGCTTCCGGCGTTCGATGCCG TGTTCACGAACGCCGCCCTCCACTGGGTCAGGGCGCCGCGGACAGTCATC GAGGGGGCGAAGCGAGTTCTCAGGCCCGGAGGAAGGTACATACCGCTGTC CATGCTCGGCACACACACATATGATAGGCTGGTTGGCACAGCAGCAGTGT ACGTGTACGTGAATCGAGGTAGAGGTATCGAGGCCATCTGCGGCTTGCAG CAGCTCACTCATACGCCGCACACGGTGTTCATGCGACATTCGTCGCGATG ATCCGGAATCGTTGGTCGAAGAAGTCTCGAACGGCTCAGTGCCGTTCTAG CAAGATAGGCCGCTCAGTGCCGTTCCAGCGAGATAGACCGTGCATGTGTA CCCCCAGGTCTGAACCTTGACTGTCCCATCGCGTCATGAAAGTGGTGGTT GCCAGCTGCAGACGTTTCGAATACAGAAGTATGCCCACTCTCGAGGTATT GCTTGCTTGAGGTATTGTGTCCCTGTATGCGTGTCACGTTTGGTTCGATG GGTATCCCTCACCTGTCATTGGTCTACGCAGAACTCCTTGCCACGACCCT GCGATGCAAACAAACCAGCGGGGAGACACGGCGGTATGTTTGTTTTCCTT GGTTGCGACCCATCTCAGCGATTCGCCGTCTCTGTGCAGGTTTGTGGGAG AGTTTGGGGGTCACGGCAACATGGCAGCCGTTAGGGTTGCCATGCACGCG GCCCTGTGGAGGCGAGGTGTGGACCCGCTGGACGTCGACCCGTGGTACTT TCCCACCCCGCACGAGTACCGACGGCTGTTGGAGGCGGTGAGCTCGGAAC CGCTCGAGCTACTGTAGTACCATGTTGCCCTCGGTTTTGTTTCTTGGCGA TCGAGATCTTTGATCGACCCCGCCGAGGACGAGGCGGAATGTTTGTTTCT GCGTTCGTCGGGAAGGAACCGTTTGACTCTTCCAAGGTTGTTTGCGGCCT CTGTTTTTTTAATTGTCTGCCCAGGGAGTGGCTGAGGGCTTCTGAGGGCC GTGAGTCTCGGTAGTCCTCTAGAGTGAATGTTCATGCTGTCGCCGGAAAA CGTCCTGCCGTCTTTTTTTCTAGTATTTGTTGTATACCGCGCGCGATCGA TCTGTTGTGTAACCATGTGTGGTCGGTCGCCCGTGAAATTTTGATCTATG TTGCGCCCAGACTGCTCTCTGTCCCCAGGTACAATCGGCTTTCTTCCTCG TTGTTCTCGATTCAGGCTGTTAACGTTGCTGGGAATATACCGATAATACG CTGTCGTATTTCGGCAGTTTGATATTCTGCCGAGAAATCAAGCCCTGCGA TTCAACACCGCGTCCCCAAAGTGCGGTACAAAAATGACGAAGGCTTTGTC GTCTGTGTGGTACTAATCTGCTTGCTGTGCGTTGAGCATCGCCTGTTCGT TTTGCTCATGGTATCAGCCCCGCGCTTCAACCCCAGCCCCCTACGGCCCG TCCCCTCTCACATCGGTCAGGCTGGGTTTGTTGTCGACGAAGTATGGCTG GTTCCGCGCCCCACCATCCTGCCGGCCGGCACCGGCATGCGAGGATGGCT TTCCACCTTTACGCAGGCGTTTCTAAACGCCATTCCCGAGGATTCTTTCA GCGAAAGTGAGACACATCCGTTTGCATCGACCTTGCACTGCTGTAACGCC TCCCTTTTTTTTTTTTTTTCTACTCTGCTCCGGAATTCGCTCGCGTACTT CACCCGCGTTCGTCTTTTGTCACCGCTCTTTTTGTTGCTACTGCCGTTAC TGTCTCGGGAGCTTGTTCCTGCGGTCGAGGACGAACACGCATGTCACACT ATTTCGAGCATTGTTGAGCGACTGTAACTTGCCGTACAACAAAGTTAATA ATGACGGTGTTGAGGCGGCGCCTTGATGCTCTTGACGTTGATGGTGCTTA AAAGCACGGGTGGTGTACTTGGAACTCAGCGCGACGTCACAGATCCGCCC CGTATCGTCAATATGATACCATATCTAAACAGTGGGTTATTCCATGCGGC AACGAAATATTACCCAAGCCACGGACCTGACGCCGCACATAAAAGGTATT GTGCTCCGTTTTTGTGAGGTGATTATCGACCGGAAGCCTGGAGCAAGCTA ACCACGGGTGAGAGTGAGCACATTCCCCTCTGCGGTGGATGAGCCACACG CTGTCTGTTTTTACACCATGAACGTCGTTCTCTGCCCCGCCGGCCTCGGA GCGATACCCCATGGAATTCAACAAGCTGATGTATGCGGTCCCTACCTTCT GCGAGAACACCCAAGTCGCTCCGTCTCTTTTTGTCCTTGCCTTGCGTCAA CGCACGATTTCATTTGACAGACCCCGAAACCGACTCGAACGGTCTCACGA AAACAGAGACCGTCGTGATCGATGAGGCCCTCGCCGCTCTACAGCCGGCC CTCAGGGACAAGGACGGTATTTGGACTGCAGACTACGTCAGGCTGCGGTT CAGGGCGCATCTCCCGTATGACAGCGCTAGCGGCCCGGCTCTAGAAGGAA GTGGGGGCGGTTTCGATGCTTCTTTCGTGGGGACAGAAATGGTGGGGGAT CAGGGACCCAAACAACTAGACGAAACGAAAGAGTTTGATAGTTTGATAGT TTGAAAGATAGAGAGAGGGAGAGAAGTGAGAGAGAAGAAAGAGAGAGACA CAGAGAGAGAGAGTCCGCAGTTTCCGATTTGGGTCACTCTTGTTTCATAC TTCAAGTACCTTTATTTATATCCCGACAATCAATTTGGTTGGTTTGGTGG GGGATTTTGATATCTGTCGAGACGGCATCGTCAGTTCGTCCACGAGTGGC TCAATTGCGGTTGAAATGGAAACTCTCGTCGTCATGTGTTTTCTGTATTT CGTTTTTGTTTTACTGGTTGGTTTCGCTCTTCAAAGTTATACGGACGACA GTAATCTATTCATAAACATGAGCACCAACCATGAGCATCAACCACGGGTA TCAACCAAGCAGGACTACGAGGAAAATCGACGAATCCACCAAAAGTGGTT GGGGGGTGTACGAATGATTCCTTTGAGCACCCAGGAGGCTAAACAAAAAG TAAACAGACCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig874:80062..90372+

>mRNA_P-littoralis_Contig874.32.4 ID=mRNA_P-littoralis_Contig874.32.4|Name=mRNA_P-littoralis_Contig874.32.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1344bp|location=Sequence derived from alignment at P-littoralis_Contig874:80062..90372+ (Pylaiella littoralis U1_48)
ATGCTGTTGCCAGCAACAACCACCCGATACACGCAAACAAGGATTTCGAC
AAAGGGACTCTGCAAAGACTTTGCAGCCTGCGGCAGCAGGCAGGTCGTCT
TCAGCAGCAGTACGCCAAGTGCACAGCAGATGCATCAACAATCTCGAGGT
ATGCTGCGGAGCAGGACAGGACTCGTGATCGCCTTCGCCAGCTCTGCCGC
CACCGTGGCGAGAGCATTTTGCGCCTCGGCTGCTTCCTCGTCTCCCACAG
AGGCGAACGGCGCCAGGACTAGAGCGCAGGATTGGGACGCTGATCGCTAC
TCGGCGAACGCCGGCTTCGTGCCAGAGCTGGGAATGCACGTGCTGGACAT
TTTGGCGCCACGGAGAGGGGAACGCATTCTGGATGTCGGCTGCGGTGATG
GTGTCCTTACCGCCGAGATCAAGTCGAGGGGCTGCAAAGTCGTGGGGATA
GACTTCGCGCCCGACATGATCGCCGCTGCTGTCGAAAGGGGTGTCGACGC
TTACGTGATGGACGCATCGGCCATGGACGCTCCTCTCCTGCTCTCCAGGC
TCGCCAGCGGCGACCGTGTCGACGACATCAGCAACGACAGCCCCTCGATT
CCGCCACCGACGCCACCAACCAGAGCAGCACCCACGAAAGCGGAACGAAA
CCCTGCCACACCCGGAGGGGGCGTTTCCGCCCCCTACCAATCCGGGGACA
GTATCCCCTCCGTCCCCCCCCTCGCTGAGAACGAAAGAGAGAAAACGCAC
CACAGAGATGGGCTTCCGGCGTTCGATGCCGTGTTCACGAACGCCGCCCT
CCACTGGGTCAGGGCGCCGCGGACAGTCATCGAGGGGGCGAAGCGAGTTC
TCAGGCCCGGAGGAAGGTTTGTGGGAGAGTTTGGGGGTCACGGCAACATG
GCAGCCGTTAGGGTTGCCATGCACGCGGCCCTGTGGAGGCGAGGTGTGGA
CCCGCTGGACGTCGACCCGTGGTACTTTCCCACCCCGCACGAGTACCGAC
GGCTGTTGGAGGCGGCTGGGTTTGTTGTCGACGAAGTATGGCTGGTTCCG
CGCCCCACCATCCTGCCGGCCGGCACCGGCATGCGAGGATGGCTTTCCAC
CTTTACGCAGGCGTTTCTAAACGCCATTCCCGAGGATTCTTTCAGCGAAA
ACCCCGAAACCGACTCGAACGGTCTCACGAAAACAGAGACCGTCGTGATC
GATGAGGCCCTCGCCGCTCTACAGCCGGCCCTCAGGGACAAGGACGGTAT
TTGGACTGCAGACTACGTCAGGCTGCGGTTCAGGGCGCATCTCCCGTATG
ACTGGGGACAGAAATGGTGGGGGATCAGGGACCCAAACAACTAG
back to top