mRNA_P-littoralis_Contig874.2.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig874.2.2
Unique NamemRNA_P-littoralis_Contig874.2.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.080e-82
Identity = 154/375 (41.07%), Postives = 197/375 (52.53%), Query Frame = 1
Query:    7 TFRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKET----------------------------EDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPFF------------------------------DYPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILS-----------------------------CFKVCGLTLNLDGSEDH 867
             F+     WY +F KR+ FSIRR+TSVGQK  +G+EG AWA + +LR  L+R A E                              +VFK L NMDQTP+Q EMP ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG+ V PRII+KGTPF                               D+PA G+  GV + SW D  + + W++  +   P   S   Q   IL LDDFK HKDE +   L   A T  ++IPGGLTP++QPLDR +NK+ KR +R KYT +  +       GK   P RGVV+TW K+ W +I+ +T+ S                             CFK+CGLTL LDGSEDH
Sbjct:   26 AFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDH 400          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 5.880e-82
Identity = 148/346 (42.77%), Postives = 192/346 (55.49%), Query Frame = 1
Query:    7 TFRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKET----------------------------EDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPF------------------------------FDYPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 867
             F+  F  WY +F KR+ FSIRR+TSVGQK  +G EG AWA + +LR  L++ A E                              +VF+ L NMDQTP+Q E+P ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG+ V PRII+KGTPF                                +PA G+  GV + SW D  + + W++  +   P   S   Q   IL LDDFK HKDE F   L   A T  + IPG LTP++QPLDR +NK+ KR +R KYT +  +       GK   P RGVV+TW K+ W + + +T+ +CF +CGLTL LDGSEDH
Sbjct:   26 AFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDH 371          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.080e-78
Identity = 155/373 (41.55%), Postives = 194/373 (52.01%), Query Frame = 1
Query:    7 TFRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKE----------------------------TEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATG--------------------------GKEKLRYTVVLSVRGDGETVKPRIIYKGTPFFD------------------------------YPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYT-HWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 867
             F+  FK WY +F KR++FSIRR+TSVG +  +G EG AWA + +LR  LL  A E                            T+++FK L NMDQTP+Q EMP ETT+ KTGAKDARIATG                          GKEK R+T+ L+V  DG  V  RII+KGTPF                                 P GG+  GV + SWCD  +   W+ + +   P   S   Q   IL LDDFK HKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT H  K   D    GK   P RG VATW K+ WA+I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:  113 AFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 484          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 2.640e-78
Identity = 145/354 (40.96%), Postives = 189/354 (53.39%), Query Frame = 1
Query:    7 TFRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKET----------------------------EDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPFFD------------------------------YPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPGASGFSQPAS---------ILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 867
             F+  F  WY +F KR+ FSIRR+ SVGQK  +G+EG AWA + +LR  L++ A E                              +VF+ L NMDQTP+Q EMP ETT+  TG KDARI+TGGKEK R+T+VL+V  DG+ V P II+KGTPF                                +PA G+  GV + SW    + + W+   +   P      +P +         IL LDDFK HKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W  ++ +T+ +CFK+CGLTL LDGSEDH
Sbjct:  180 AFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDH 533          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.650e-76
Identity = 145/346 (41.91%), Postives = 191/346 (55.20%), Query Frame = 1
Query:   10 FRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKET----------------------------EDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGG-KEKLRYTVVLSVRGDGETVKPRIIYKGTPFFD------------------------------YPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 867
            F+  F  WY +F KR+ FSIRR+TSVGQK  +G+EG AWA + +L   L++ A E                              +VF+ + NMDQ P+Q EMP ETT+ KTGAKDARI+TGG  EK R+T+VL+V  DG+ V PRII++GTPF                                +PA G+  GV + SW D  + + W++  +   P   S   Q   IL LDDFK H DE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +  +       GK   P RGVV+TW K+ W +I+ +T+ +C K+CGLTL LDGSEDH
Sbjct:  221 FKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDH 566          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 2.590e-74
Identity = 149/359 (41.50%), Postives = 189/359 (52.65%), Query Frame = 1
Query:    7 TFRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKET----------------------------EDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPFFDYPAGG-----------VGLGVHKA--------------------------------SWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 867
             F+  F  WY +F KR+ FSIRR+TSVGQK  +G+EG AWA + +LR  L++ A E                              +VF+ L NMDQTP+Q EMP ETT+ KTGAKDARI+TGG+EK R+T+VL+V  DG+ V PRII+KGTPF      G           V   +H A                                SW D  + + W+   +   P   S   Q   IL LDDFK HKDE F   L   AKT  + IPGGLT ++QPLDR +NK+ KR +R KYT    +       GK   P  GVV+TW K+ W +I+ KT+ +CFK+CGLTL LDGSE H
Sbjct:  208 AFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHH 565          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 1.410e-73
Identity = 144/345 (41.74%), Postives = 185/345 (53.62%), Query Frame = 1
Query:    7 TFRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKE----------------------------TEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPF------------------------------FDYPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSED 864
             FR  FK WY++F +RH  SIRR+TSVGQK   G+EG A+A + +LR+ LL  A E                              +VF+ L NMDQTP+Q EMP ETT+ K GAKDARI+TGGKEK R+T+ L+V  DG  V  RII+KG PF                              F YP  G+  GV + SW D  +   WL+E +   P   S   Q  SIL LDDF              +  T  ++IPGGLTP++QPLDR ++KE KR +R +YT ++ +       GK   P RG+V+TW K+ WA I+ +T+  CFKVCGLTL LDGSED
Sbjct:  199 AFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 2.130e-73
Identity = 146/334 (43.71%), Postives = 184/334 (55.09%), Query Frame = 1
Query:   22 FKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRSILLRHAKE----------------------------TEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPFFD------------------------------YPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYT-HWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTL 843
            FK WY +F KR++FSIRR+TSVGQK  +G EG AWA + +LR  LL  A E                            T+++F+ L NMDQTP+Q EMP ETT+  TGAKDARIATGGKEK R+T+ L+V  DG+ V  RII+KGTPF                                 P GG+  GV + SWCD  +   W+ + +   P   S   Q   IL LDDFK HKD+ F   L  +A T  + IPGGL P+ QPLDR +NK+ KR +R  YT H  K   D    GK V P RG VATW K+ WA+I+ + + +CFK+CGLTL
Sbjct:  185 FKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 5.600e-68
Identity = 116/252 (46.03%), Postives = 148/252 (58.73%), Query Frame = 1
Query:  205 MDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPF------------------------------FDYPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 867
            MDQTP+Q EMP ETT+ KTGAKDARI+TGGKE+ R+ +VL+V  DG+ V PRI +KGTPF                                +PA GV  GV + SW D  + + W++  +   P   S   Q   IL LDDFKRHKDE F   L   A T  + IPGGLTP++QPLD  +NK+ KR +R KY  +  +       GK   P RGVV+TW K+ W +I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDH 252          
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 4.530e-67
Identity = 120/260 (46.15%), Postives = 155/260 (59.62%), Query Frame = 1
Query:  181 DVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGETVKPRIIYKGTPFFD------------------------------YPAGGVGLGVHKASWCDTTQTDAWLTEEFMRLPG-ASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 867
            +VF+ L NMDQTP+Q EMP ETT+ KTGAKDAR++TGG+EK R+T+VL+V  DG+ V  RII+ GTPF                                +PA G+  GV + SW D  + + W +  +   P   S   Q   IL LDDFK HKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R+KYT +  +  D    GK   P RGVV+TW K  W +I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:   46 EVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARS-GKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDH 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig874.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUK2_9PHAE1.080e-8241.07DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE5.880e-8242.77DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.080e-7841.55DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE2.640e-7840.96DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.650e-7641.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE2.590e-7441.50DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.410e-7341.74DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE2.130e-7343.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT06_9PHAE5.600e-6846.03DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE4.530e-6746.15DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig874contigP-littoralis_Contig874:5617..7272 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size867
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.98e-48
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size867
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791755.2515728-CDS-P-littoralis_Contig874:5616..60991680791755.2515728-CDS-P-littoralis_Contig874:5616..6099Pylaiella littoralis U1_48CDSP-littoralis_Contig874 5617..6099 -
1680791755.2697148-CDS-P-littoralis_Contig874:6186..62781680791755.2697148-CDS-P-littoralis_Contig874:6186..6278Pylaiella littoralis U1_48CDSP-littoralis_Contig874 6187..6278 -
1680791755.2804067-CDS-P-littoralis_Contig874:6863..69781680791755.2804067-CDS-P-littoralis_Contig874:6863..6978Pylaiella littoralis U1_48CDSP-littoralis_Contig874 6864..6978 -
1680791755.2915218-CDS-P-littoralis_Contig874:7095..72721680791755.2915218-CDS-P-littoralis_Contig874:7095..7272Pylaiella littoralis U1_48CDSP-littoralis_Contig874 7096..7272 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig874.2.2prot_P-littoralis_Contig874.2.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig874 5617..7272 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig874.2.2

>prot_P-littoralis_Contig874.2.2 ID=prot_P-littoralis_Contig874.2.2|Name=mRNA_P-littoralis_Contig874.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=289bp
METFRKNFKKWYYKFLKRHRFSIRRKTSVGQKKSEGWEGKAWAFIQQLRS
ILLRHAKETEDVFKLLYNMDQTPIQAEMPQETTIAKTGAKDARIATGGKE
KLRYTVVLSVRGDGETVKPRIIYKGTPFFDYPAGGVGLGVHKASWCDTTQ
TDAWLTEEFMRLPGASGFSQPASILTLDDFKRHKDEAFQQKLASKAKTEA
VMIPGGLTPVVQPLDRSINKEFKRGIRAKYTHWVKNEFDRNGPGKAVAPS
RGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH
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mRNA from alignment at P-littoralis_Contig874:5617..7272-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig874.2.2 ID=mRNA_P-littoralis_Contig874.2.2|Name=mRNA_P-littoralis_Contig874.2.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1656bp|location=Sequence derived from alignment at P-littoralis_Contig874:5617..7272- (Pylaiella littoralis U1_48)
ATGGAAACCTTCCGGAAGAACTTCAAGAAGTGGTACTACAAGTTCCTCAA GAGGCACAGGTTCTCGATCCGTCGCAAGACAAGTGTCGGGCAGAAGAAGT CGGAGGGTTGGGAGGGGAAGGCATGGGCCTTCATCCAGCAGCTGCGCTCG ATACTGCTTCGCCATGCCAAGGAAACCGTTGCCGCGAACAGGACAGCGGC AAAGGCGGCAGCGGCAACGGCGGGAGAGACGGTCGAGATCGAGATCGAAG AGACCCCAGTGGCGGTGACTGCGGAGGAACTGTTGAGCGTGCAGGAGGAC GTGTTCAAGCTGCTCTACAACATGGATCAGACACCCATCCAAGCAGAGAT GCCGCAAGAGACCACGATCGCCAAGACTGGTGCGAAGGACGCTCGCATCG CGACAGGAGGTAAGATCTTGCTTGTGCGTCAATTCAGATAACAACGATGA CTCAAAAACCCTCTCGGGACGAAAGTTCTCTTTGCCAAAAAATCAGAAAA TTGAAGTGTGGCGACTTGCCAAAAATTCAGAATATAGAAGTGCGGCGACT TTTGTTTGAAACTATTTTTTTGTTTTTGCCGTCACCTCTCTCTCTCTCTC TCTCTCTCTCTCTCCCCCCCTCTCTCTCTCCCTCGCTCTCTGGAACAATG TCGTTCCTTCTTCGTTCCTTCATCGTGATATGATGTATCCACGTTGTTGA CAGTAACGGTCGCAATGCATAATGGGTAAAAAAATCAATACATGACACCA CCGTCTTGCCTGCGTCTTGCCGTCTGTGCATGCTTATTATTTTTATTATG TTTTGTTCAATTATGCATATTGTTTTACAATTATTAATATGAATGTACGA GTACTCTGTTCACCTCTTTGGCGCTGACTGTGTTGGTTGTACCGTCTTTG TTTTAAATACACAACCTTTTGTCCAAATACCGTATGTTGCTCACTTGCCT TTATCGTCCCCTCTCCTCAATCTGCTGTAATTTATTATGATCAGGGAAGG AGAAGCTGAGGTACACCGTGGTGTTATCTGTGCGTGGTGACGGGGAGACG GTGAAGCCTCGCATCATCTACAAGGGCACCCCGTTCGTCTCCAAGAAGAC CAAGAAGGGTGCGTCGACCAAGCCCGGCAAGAACACTCTGACGTACCAGC ACATGCCGGCCAACCGAACGCAGTTCGACTACCCGGCGGGCGGCGTAGGC CTCGGGGTGCATAAGGCTTCATGGTGCGACACGACCCAGACCGACGCGTG GCTAACGGAGGAGTTCATGCGCCTCCCCGGCGCCAGCGGTTTCTCTCAGC CGGCCAGCATTCTCACGCTGGACGACTTCAAACGCCACAAGGACGAAGCG TTCCAGCAGAAGCTGGCAAGCAAGGCCAAGACGGAGGCGGTGATGATTCC TGGCGGGCTGACGCCGGTGGTCCAGCCGCTCGACCGCAGCATCAACAAGG AGTTCAAGCGTGGGATAAGGGCCAAGTACACCCACTGGGTGAAGAACGAG TTCGACCGCAATGGGCCTGGCAAGGCAGTGGCGCCGAGCAGGGGGGTGGT GGCGACGTGGGTGAAGGATGTGTGGGCGAACATCTCGGTGAAGACGATCC TGTCGTGCTTCAAGGTGTGCGGCCTCACCCTCAACCTGGACGGCAGCGAG GACCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig874:5617..7272-

>mRNA_P-littoralis_Contig874.2.2 ID=mRNA_P-littoralis_Contig874.2.2|Name=mRNA_P-littoralis_Contig874.2.2|organism=Pylaiella littoralis U1_48|type=CDS|length=867bp|location=Sequence derived from alignment at P-littoralis_Contig874:5617..7272- (Pylaiella littoralis U1_48)
ATGGAAACCTTCCGGAAGAACTTCAAGAAGTGGTACTACAAGTTCCTCAA
GAGGCACAGGTTCTCGATCCGTCGCAAGACAAGTGTCGGGCAGAAGAAGT
CGGAGGGTTGGGAGGGGAAGGCATGGGCCTTCATCCAGCAGCTGCGCTCG
ATACTGCTTCGCCATGCCAAGGAAACCGAGGACGTGTTCAAGCTGCTCTA
CAACATGGATCAGACACCCATCCAAGCAGAGATGCCGCAAGAGACCACGA
TCGCCAAGACTGGTGCGAAGGACGCTCGCATCGCGACAGGAGGGAAGGAG
AAGCTGAGGTACACCGTGGTGTTATCTGTGCGTGGTGACGGGGAGACGGT
GAAGCCTCGCATCATCTACAAGGGCACCCCGTTCTTCGACTACCCGGCGG
GCGGCGTAGGCCTCGGGGTGCATAAGGCTTCATGGTGCGACACGACCCAG
ACCGACGCGTGGCTAACGGAGGAGTTCATGCGCCTCCCCGGCGCCAGCGG
TTTCTCTCAGCCGGCCAGCATTCTCACGCTGGACGACTTCAAACGCCACA
AGGACGAAGCGTTCCAGCAGAAGCTGGCAAGCAAGGCCAAGACGGAGGCG
GTGATGATTCCTGGCGGGCTGACGCCGGTGGTCCAGCCGCTCGACCGCAG
CATCAACAAGGAGTTCAAGCGTGGGATAAGGGCCAAGTACACCCACTGGG
TGAAGAACGAGTTCGACCGCAATGGGCCTGGCAAGGCAGTGGCGCCGAGC
AGGGGGGTGGTGGCGACGTGGGTGAAGGATGTGTGGGCGAACATCTCGGT
GAAGACGATCCTGTCGTGCTTCAAGGTGTGCGGCCTCACCCTCAACCTGG
ACGGCAGCGAGGACCAC
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