prot_P-littoralis_Contig873.23.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig873.23.2
Unique Nameprot_P-littoralis_Contig873.23.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length158
Homology
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BLAST of mRNA_P-littoralis_Contig873.23.2 vs. uniprot
Match: A0A6H5KV53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV53_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.970e-7
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 0 
Query:   31 VLEHHTARTREFAPAACRVVSSVYCECVVEPQPMKDFT---QREERRVAARQHPGTCGVAMAGLIAAGETEDVRQTASRRQQEATFKSFRNQACYEAARTLNVRGAGIPSPSQQMLRES 146
            V E H  R REF   A  VV++    C+ +  P+K       R++   AA++HPG CGV +AG+      +DV   A RR    TF    NQ C++AA+ L V G G+    ++   ++
Sbjct:    4 VRESHPGRVREFVFDA--VVAAGAGSCLHD-DPLKALPGGLTRDQGVEAAKEHPGLCGVYLAGV----SFDDVLAAAERRGVSVTFNVLLNQCCFDAAKKLRVGGMGVQLARKECFTQA 115
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig873.23.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KV53_9PHAE1.970e-733.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig873contigP-littoralis_Contig873:99146..103276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig873.23.2mRNA_P-littoralis_Contig873.23.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig873 65146..104242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig873.23.2 ID=prot_P-littoralis_Contig873.23.2|Name=mRNA_P-littoralis_Contig873.23.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=158bp
MADQDYPHHVHTAELEADGSAVHADSFSSCVLEHHTARTREFAPAACRVV
SSVYCECVVEPQPMKDFTQREERRVAARQHPGTCGVAMAGLIAAGETEDV
RQTASRRQQEATFKSFRNQACYEAARTLNVRGAGIPSPSQQMLRESVPGA
LGWGRSD*
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