prot_P-littoralis_Contig872.25.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig872.25.1
Unique Nameprot_P-littoralis_Contig872.25.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length135
Homology
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BLAST of mRNA_P-littoralis_Contig872.25.1 vs. uniprot
Match: A0A6H5KLZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ5_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.550e-7
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 0 
Query:   90 AAAMKRKRGNADLEMAAADPLQAAITSGLREGDVAPRPAKASRKST 135
            AA +KR R NADLE+AA+DP+QAAITSG R G+ APRPAKA RK T
Sbjct:   30 AAGVKRTRVNADLEVAASDPVQAAITSGPRGGEAAPRPAKAPRKPT 75
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BLAST of mRNA_P-littoralis_Contig872.25.1 vs. uniprot
Match: A0A6H5KM72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM72_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 5.740e-7
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:   12 RMIKIDGADRVVKHTWKLGSRGGYVLTSVLLDKGTQRSRGAKIQDVAADNDEVIAVAKEHANKIRQRAESR 82
            R IKI G  RV+KH W++ +RG Y LTS LL KGT+ +    I  V  D + V+ +A+EH + +R+RA  R
Sbjct:    4 RDIKIAGEARVIKHRWRMHTRG-YQLTSTLLQKGTEIAATKAIGSVVDDLEGVVHMAREHVDDLRERASKR 73
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig872.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLZ5_9PHAE1.550e-771.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KM72_9PHAE5.740e-745.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig872contigP-littoralis_Contig872:106220..106624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig872.25.1mRNA_P-littoralis_Contig872.25.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig872 106079..106624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig872.25.1 ID=prot_P-littoralis_Contig872.25.1|Name=mRNA_P-littoralis_Contig872.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=135bp
MADPRNPGECLRMIKIDGADRVVKHTWKLGSRGGYVLTSVLLDKGTQRSR
GAKIQDVAADNDEVIAVAKEHANKIRQRAESRQRSSASTAAAMKRKRGNA
DLEMAAADPLQAAITSGLREGDVAPRPAKASRKST
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