prot_P-littoralis_Contig871.15.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig871.15.4
Unique Nameprot_P-littoralis_Contig871.15.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1062
Homology
BLAST of mRNA_P-littoralis_Contig871.15.4 vs. uniprot
Match: D8LK34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK34_ECTSI)

HSP 1 Score: 1018 bits (2631), Expect = 0.000e+0
Identity = 654/970 (67.42%), Postives = 708/970 (72.99%), Query Frame = 0
Query:   51 MSVDLLAASRRPWKRLLHDCPFPEWENIALFVDGGSAEALRWAGGLGFVLEELGISQVLDLQAFVPEKKGGAGRAPECDGLTRGIFLVTTFVWDVEGAVLNAARTYGLTEVAVACSVSEEAHACHPHAAHISEETGGHVSFPVVSQQLKVSLERMLKIQAQSSSTSRRRFVAPPSSSSSPFPXXXXXXXXXXDSLYASSTSTLQPRTEHDRDYFPSVSVTIVHSPIHLGCFFQPAT------GRSSTISSSSSNPALGKTGCSSFSLASPACARVFPLRRCDWEGGGXXXXXXXXFAAATAVEGGVXXXXXXXXHASAEEVPRAERLQYRLLAHTLVEALWDQLLLDVSGSGGVFTLGDTSRLIGSTVAAAAEDIKRVGIERQSPLGFGG-------------GTDSXXXXXXXXXXXXVVLIDRTLDLAAAASHGGSLLQRILSSIPRTGTEASALPPSSSSSASEAFATDWSPVSAAHQQDVGVVLPMLAPGLGFPIGCGGXXXXXXXXXXDGTRAEGT---KPPRLLAMNALASFSWPAPPSLCHSGTNT-AAAGVVHTMGCLGEPEGQAALISALEKCVSDNGCTLPPPKRRGMGSSIMALVTSLARGNPRPGGLSGDRVCFRCRGVVQVALAAMEAHQRTSALAGSGWQETVAAERAQLQQLRDGSTVDVVMEQLYASLNEAPPSARPSSLGSD--------TGAARAGSSTRDALLLALRGVSLAGEGIRTEDAGSFRKAWVSRMLAGGIREAGSGVPSGVAEAVDRISSR-RESTRGVEAAGGRFAEESAEGTGVRLELEDIARERTQRLREAAASRPFHLKNTPVLRDLAFEPYTFVASAPAPAEGSGGXXXXXXXXXXXXXXXXXXGDDETAD-VKEQTSGDVDGEGAS-VEHTMECDTLVARLAGLMLDRNNPDVADLHEAKLVSAASVGLGLLSSGLKKLGRIGGATGGVRGGRHKKSR 986
            M+VDLLAASRRP +RLLH+C F +WENIALF+D G+ EA+RWAGGLGFVLEELGIS +LDLQAF P +   A   PE +GLTRGIFLVT FVWDVEGAVL+AA TYGLTEVA+ACSVSEEAHACH HAAHISEETGG  SF VVSQQLKVSLERMLKI+AQSSS+ RRRF       S P P   XXXXXXX    A+  +        D    P+V VTI HSP+H+GCFFQ +T      G S  +     +    + GCS+FSLASPACARVFPLRRCDWEG  XXXXXXXX           XXXX    H SAEEVPR ERL+YRLLAHTLVEALWDQLLLDVSG GGVFTLGDTSRLIG+TVAA AED+KRV +ER +P GFGG             G  S            VVLIDR LD+AAAASHGGSLLQRILSSI RTGT  SA+P + SS   EA A DWSP +AAHQQDVGVVLPML PGLG P          XXXXX           KPPRLLAM AL+ F W APPSLCHSG +  AAAGVVH M C GE EGQAALISALEKCVSDNGC  PP KRRGMGSSIMALVTSLARGNPR GGLSGDRVCF+ RGV+QVALAAMEAHQRTS+LAGSGW ETVAAER QL+QLRDGSTVDVVMEQL A+LN APP    SS  S          GAAR GSS R+ALLLALRGVSLAGE I  +DA SFRKAW+SRMLAGG RE GSGVP+GVAEAVD+I SR RE T   E A         E  GV LELEDIARERTQRLRE A+SR FHLK+T VLRDL FEPYTFVASA A       XXXXXXXXXXXXXXX    DD   D   E T G  + +G S  EHT ECDTLV RLAGL+LDR  PDV DL+EAK+VS ASVGLGLLSSGLKKLGR+GGA GGV  GRHK+SR
Sbjct:    1 MAVDLLAASRRPLERLLHECSFSQWENIALFLDEGATEAVRWAGGLGFVLEELGISHILDLQAFAPGRSPPA--VPESEGLTRGIFLVTNFVWDVEGAVLHAACTYGLTEVALACSVSEEAHACHSHAAHISEETGGRASFAVVSQQLKVSLERMLKIKAQSSSSGRRRF-------SKPSPSSTXXXXXXXTQTIATEAAPHLAANAVD----PTVLVTIKHSPLHVGCFFQASTTITSGGGSSVDVDQPLDSQGQHQKGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXXXXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPGFGGEGGADSASSGRGGGFGSDGAGPAARREASVVLIDRNLDVAAAASHGGSLLQRILSSIDRTGTPNSAVPATPSSP--EAVAIDWSPSAAAHQQDVGVVLPMLTPGLGLPARAAAVERSGXXXXXXXXXXXXXXXGKPPRLLAMKALSGFPWRAPPSLCHSGGDAGAAAGVVHAMACHGEEEGQAALISALEKCVSDNGCVPPPRKRRGMGSSIMALVTSLARGNPRAGGLSGDRVCFKSRGVLQVALAAMEAHQRTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMDFSSSSSSPPGGTASLGAGAARTGSSAREALLLALRGVSLAGESIGAQDATSFRKAWISRMLAGGFREGGSGVPAGVAEAVDQIRSRKRERTTAPEPAAESVGTGEVEEAGVLLELEDIARERTQRLREVASSRSFHLKSTAVLRDLGFEPYTFVASATAXXXXXXXXXXXXXXXXXXXXXXEEGWDDWGEDEAGEGTPGVANDDGGSRTEHTAECDTLVGRLAGLLLDRTRPDVPDLYEAKVVSPASVGLGLLSSGLKKLGRMGGAGGGVHRGRHKQSR 955          
BLAST of mRNA_P-littoralis_Contig871.15.4 vs. uniprot
Match: A0A7S2RG32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG32_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.450e-5
Identity = 40/132 (30.30%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   49 SAMSVDLLAASRRPWKRLLHDCPFPEWENIALFVDGGSAEALRWAGGLGFVLEELGISQVLDLQAFVPEKKGGAGRAP-ECDGLTRG---IFLVTTFVWDVEGAVLNAARTYGLTEVAVACSVSEEAHACHP 176
            ++  +D L  +R+P++  L        +   LF+D  +AEAL+WAGGL F LEELG   VL L  + P  + G G  P E   L RG   + ++ + +W+ +  ++      G +E  +  +   + HA  P
Sbjct:    6 ASADLDPLEWNRQPFRTRLFARAV---KGALLFLDDVAAEALKWAGGLPFALEELGAQAVLRLGDYGPPGETGEGGLPGEVSVLPRGDRVVVVLASALWEAQHELIAVLTGTGASEALLCPAQDGDRHAVEP 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig871.15.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK34_ECTSI0.000e+067.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RG32_9STRA1.450e-530.30Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 715..730
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..730
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 868..917
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig871contigP-littoralis_Contig871:45549..58101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig871.15.4mRNA_P-littoralis_Contig871.15.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig871 45549..58101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig871.15.4 ID=prot_P-littoralis_Contig871.15.4|Name=mRNA_P-littoralis_Contig871.15.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1062bp
ERGRGLPSPGSDPGLETWATFPAEPTPFAPRHVVTLEVHGQPVIFRKYSA
MSVDLLAASRRPWKRLLHDCPFPEWENIALFVDGGSAEALRWAGGLGFVL
EELGISQVLDLQAFVPEKKGGAGRAPECDGLTRGIFLVTTFVWDVEGAVL
NAARTYGLTEVAVACSVSEEAHACHPHAAHISEETGGHVSFPVVSQQLKV
SLERMLKIQAQSSSTSRRRFVAPPSSSSSPFPSSSSMPVPTEDSLYASST
STLQPRTEHDRDYFPSVSVTIVHSPIHLGCFFQPATGRSSTISSSSSNPA
LGKTGCSSFSLASPACARVFPLRRCDWEGGGGGGAGAALFAAATAVEGGV
GGDGGAGGHASAEEVPRAERLQYRLLAHTLVEALWDQLLLDVSGSGGVFT
LGDTSRLIGSTVAAAAEDIKRVGIERQSPLGFGGGTDSAGGGSSTRREAS
VVLIDRTLDLAAAASHGGSLLQRILSSIPRTGTEASALPPSSSSSASEAF
ATDWSPVSAAHQQDVGVVLPMLAPGLGFPIGCGGGGGGGGGGGGDGTRAE
GTKPPRLLAMNALASFSWPAPPSLCHSGTNTAAAGVVHTMGCLGEPEGQA
ALISALEKCVSDNGCTLPPPKRRGMGSSIMALVTSLARGNPRPGGLSGDR
VCFRCRGVVQVALAAMEAHQRTSALAGSGWQETVAAERAQLQQLRDGSTV
DVVMEQLYASLNEAPPSARPSSLGSDTGAARAGSSTRDALLLALRGVSLA
GEGIRTEDAGSFRKAWVSRMLAGGIREAGSGVPSGVAEAVDRISSRREST
RGVEAAGGRFAEESAEGTGVRLELEDIARERTQRLREAAASRPFHLKNTP
VLRDLAFEPYTFVASAPAPAEGSGGGSSGGGGGRGGEDGWDDWGDDETAD
VKEQTSGDVDGEGASVEHTMECDTLVARLAGLMLDRNNPDVADLHEAKLV
SAASVGLGLLSSGLKKLGRIGGATGGVRGGRHKKSRRPTDRPVVVIFVVG
GFTPLELAEVSGVLRCAAAAVAATSTGAEVRDTEVILAGTTVSTPDVVYE
QIFTRPPAGQG*
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